RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
PRKCSH-205ENST00000587327 KANK4Q5T7N3 995 aaPredicted RBP24.9■■□□□ 1.58
PRKCSH-205ENST00000587327 CUL7Q14999 1698 aa24.87■■□□□ 1.57
PRKCSH-205ENST00000587327 DHX57Q6P158 1386 aaKnown RBP24.85■■□□□ 1.57
PRKCSH-205ENST00000587327 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
PRKCSH-205ENST00000587327 RRBP1Q9P2E9 1410 aaKnown RBP24.82■■□□□ 1.56
PRKCSH-205ENST00000587327 ABCA5Q8WWZ7 1642 aa24.82■■□□□ 1.56
PRKCSH-205ENST00000587327 CTTNBP2Q8WZ74 1663 aa24.73■■□□□ 1.55
PRKCSH-205ENST00000587327 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
PRKCSH-205ENST00000587327 TARBP1Q13395 1621 aaKnown RBP24.7■■□□□ 1.55
PRKCSH-205ENST00000587327 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
PRKCSH-205ENST00000587327 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
PRKCSH-205ENST00000587327 TIAM1Q13009 1591 aa24.69■■□□□ 1.54
PRKCSH-205ENST00000587327 MAP3K1Q13233 1512 aa24.69■■□□□ 1.54
PRKCSH-205ENST00000587327 EFCAB5A4FU69 1503 aa24.67■■□□□ 1.54
PRKCSH-205ENST00000587327 PCF11O94913 1555 aaKnown RBP24.65■■□□□ 1.54
PRKCSH-205ENST00000587327 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.53
PRKCSH-205ENST00000587327 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
PRKCSH-205ENST00000587327 FHOD3Q2V2M9 1422 aa24.61■■□□□ 1.53
PRKCSH-205ENST00000587327 CFAP43Q8NDM7 1665 aa24.61■■□□□ 1.53
PRKCSH-205ENST00000587327 P3H3Q8IVL6 736 aa24.56■■□□□ 1.52
PRKCSH-205ENST00000587327 LRRC9Q6ZRR7 1453 aa24.56■■□□□ 1.52
PRKCSH-205ENST00000587327 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
PRKCSH-205ENST00000587327 FYCO1Q9BQS8 1478 aa24.53■■□□□ 1.52
PRKCSH-205ENST00000587327 SAMD9Q5K651 1589 aa24.52■■□□□ 1.52
PRKCSH-205ENST00000587327 AQRO60306 1485 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■□□ 18.9
PRKCSH-205ENST00000587327 ITGAEP38570 1179 aa24.51■■□□□ 1.51
PRKCSH-205ENST00000587327 CASKIN1Q8WXD9 1431 aa24.5■■□□□ 1.51
PRKCSH-205ENST00000587327 WDR62O43379 1518 aa24.48■■□□□ 1.51
PRKCSH-205ENST00000587327 RAB3GAP2Q9H2M9 1393 aa24.47■■□□□ 1.51
PRKCSH-205ENST00000587327 ADAMTS12P58397 1594 aa24.45■■□□□ 1.51
PRKCSH-205ENST00000587327 SNAPC4Q5SXM2 1469 aa24.44■■□□□ 1.5
PRKCSH-205ENST00000587327 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
PRKCSH-205ENST00000587327 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
PRKCSH-205ENST00000587327 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
PRKCSH-205ENST00000587327 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
PRKCSH-205ENST00000587327 SETD5Q9C0A6 1442 aa24.38■■□□□ 1.49
PRKCSH-205ENST00000587327 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
PRKCSH-205ENST00000587327 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
PRKCSH-205ENST00000587327 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
PRKCSH-205ENST00000587327 LRRIQ1Q96JM4 1722 aa24.34■■□□□ 1.49
PRKCSH-205ENST00000587327 IQGAP2Q13576 1575 aa24.31■■□□□ 1.48
PRKCSH-205ENST00000587327 THOC2Q8NI27 1593 aaKnown RBP24.3■■□□□ 1.48
PRKCSH-205ENST00000587327 FAM50AQ14320 339 aaKnown RBP24.29■■□□□ 1.48
PRKCSH-205ENST00000587327 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
PRKCSH-205ENST00000587327 EIF4G3O43432 1585 aaKnown RBP24.26■■□□□ 1.47
PRKCSH-205ENST00000587327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.46
PRKCSH-205ENST00000587327 UGGT2Q9NYU1 1516 aa24.18■■□□□ 1.46
PRKCSH-205ENST00000587327 TIMELESSQ9UNS1 1208 aa24.18■■□□□ 1.46
PRKCSH-205ENST00000587327 MTUS2Q5JR59 1369 aa24.18■■□□□ 1.46
PRKCSH-205ENST00000587327 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
PRKCSH-205ENST00000587327 FGD6Q6ZV73 1430 aa24.16■■□□□ 1.46
PRKCSH-205ENST00000587327 EHBP1L1Q8N3D4 1523 aa24.16■■□□□ 1.46
PRKCSH-205ENST00000587327 SUPT16HQ9Y5B9 1047 aaKnown RBP24.15■■□□□ 1.46
PRKCSH-205ENST00000587327 HECW1Q76N89 1606 aa24.15■■□□□ 1.46
PRKCSH-205ENST00000587327 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
PRKCSH-205ENST00000587327 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
PRKCSH-205ENST00000587327 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
PRKCSH-205ENST00000587327 MAGI3Q5TCQ9 1506 aa24.12■■□□□ 1.45
PRKCSH-205ENST00000587327 SUPT6HQ7KZ85 1726 aaKnown RBP24.12■■□□□ 1.45
PRKCSH-205ENST00000587327 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
PRKCSH-205ENST00000587327 MYT1Q01538 1121 aa24.09■■□□□ 1.45
PRKCSH-205ENST00000587327 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
PRKCSH-205ENST00000587327 ARHGEF11O15085 1522 aa24.08■■□□□ 1.45
PRKCSH-205ENST00000587327 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
PRKCSH-205ENST00000587327 KCNH8Q96L42 1107 aa24.07■■□□□ 1.44
PRKCSH-205ENST00000587327 MYOM3Q5VTT5 1437 aa24.06■■□□□ 1.44
PRKCSH-205ENST00000587327 EPRSP07814 1512 aaKnown RBP24.06■■□□□ 1.44
PRKCSH-205ENST00000587327 DISP1Q96F81 1524 aa24.06■■□□□ 1.44
PRKCSH-205ENST00000587327 PPP1R15AO75807 674 aaPredicted RBP24.04■■□□□ 1.44
PRKCSH-205ENST00000587327 DDX10Q13206 875 aaKnown RBP24.04■■□□□ 1.44
PRKCSH-205ENST00000587327 CDK13Q14004 1512 aaKnown RBP24.02■■□□□ 1.44
PRKCSH-205ENST00000587327 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
PRKCSH-205ENST00000587327 CEP170Q5SW79 1584 aa24■■□□□ 1.43
PRKCSH-205ENST00000587327 PTPRKQ15262 1439 aa23.98■■□□□ 1.43
PRKCSH-205ENST00000587327 PTPN23Q9H3S7 1636 aa23.97■■□□□ 1.43
PRKCSH-205ENST00000587327 HFM1A2PYH4 1435 aa23.95■■□□□ 1.43
PRKCSH-205ENST00000587327 UACAQ9BZF9 1416 aa23.92■■□□□ 1.42
PRKCSH-205ENST00000587327 RAPGEF6Q8TEU7 1601 aa23.91■■□□□ 1.42
PRKCSH-205ENST00000587327 TCOF1Q13428 1488 aaKnown RBP23.91■■□□□ 1.42
PRKCSH-205ENST00000587327 NUP153P49790 1475 aaKnown RBP23.91■■□□□ 1.42
PRKCSH-205ENST00000587327 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
PRKCSH-205ENST00000587327 NUP160Q12769 1436 aa23.9■■□□□ 1.42
PRKCSH-205ENST00000587327 TONSLQ96HA7 1378 aa23.89■■□□□ 1.41
PRKCSH-205ENST00000587327 HIRIP3Q9BW71 556 aaPredicted RBP23.88■■□□□ 1.41
PRKCSH-205ENST00000587327 NAIPQ13075 1403 aa23.86■■□□□ 1.41
PRKCSH-205ENST00000587327 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
PRKCSH-205ENST00000587327 CCER2I3L3R5 266 aa23.86■■□□□ 1.41
PRKCSH-205ENST00000587327 MIA2Q96PC5 1412 aa23.82■■□□□ 1.4
PRKCSH-205ENST00000587327 ANP32CO43423 234 aa23.82■■□□□ 1.4
PRKCSH-205ENST00000587327 FBLN2P98095 1184 aa23.82■■□□□ 1.4
PRKCSH-205ENST00000587327 GCC2Q8IWJ2 1684 aa23.78■■□□□ 1.4
PRKCSH-205ENST00000587327 PLB1Q6P1J6 1458 aa23.77■■□□□ 1.39
PRKCSH-205ENST00000587327 TSHZ2Q9NRE2 1034 aa23.76■■□□□ 1.39
PRKCSH-205ENST00000587327 CARMIL2Q6F5E8 1435 aa23.74■■□□□ 1.39
PRKCSH-205ENST00000587327 AKNAQ7Z591 1439 aa23.73■■□□□ 1.39
PRKCSH-205ENST00000587327 JPH4Q96JJ6 628 aa23.73■■□□□ 1.39
PRKCSH-205ENST00000587327 KDM5BQ9UGL1 1544 aa23.71■■□□□ 1.39
PRKCSH-205ENST00000587327 FKBP8Q14318 412 aa23.7■■□□□ 1.38
PRKCSH-205ENST00000587327 TROQ12816 1431 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms