RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 ADAMTS12P58397 1594 aa23.93■■□□□ 1.42
SMARCA4-211ENST00000586921 ADGRL1O94910 1474 aa23.91■■□□□ 1.42
SMARCA4-211ENST00000586921 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
SMARCA4-211ENST00000586921 TSPOAP1O95153 1857 aa23.9■■□□□ 1.42
SMARCA4-211ENST00000586921 FBXO41Q8TF61 875 aa23.82■■□□□ 1.4
SMARCA4-211ENST00000586921 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
SMARCA4-211ENST00000586921 ADCY10Q96PN6 1610 aa23.79■■□□□ 1.4
SMARCA4-211ENST00000586921 JPH4Q96JJ6 628 aa23.77■■□□□ 1.4
SMARCA4-211ENST00000586921 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
SMARCA4-211ENST00000586921 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.37
SMARCA4-211ENST00000586921 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
SMARCA4-211ENST00000586921 PPRC1Q5VV67 1664 aaKnown RBP23.57■■□□□ 1.36
SMARCA4-211ENST00000586921 LMTK3Q96Q04 1460 aa23.56■■□□□ 1.36
SMARCA4-211ENST00000586921 COL17A1Q9UMD9 1497 aaPredicted RBP23.5■■□□□ 1.35
SMARCA4-211ENST00000586921 GLI2P10070 1586 aa23.49■■□□□ 1.35
SMARCA4-211ENST00000586921 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
SMARCA4-211ENST00000586921 ASXL2Q76L83 1435 aa23.45■■□□□ 1.34
SMARCA4-211ENST00000586921 PLB1Q6P1J6 1458 aa23.44■■□□□ 1.34
SMARCA4-211ENST00000586921 ABCC2Q92887 1545 aa23.42■■□□□ 1.34
SMARCA4-211ENST00000586921 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
SMARCA4-211ENST00000586921 TEX14Q8IWB6 1497 aa23.38■■□□□ 1.33
SMARCA4-211ENST00000586921 PTPRGP23470 1445 aa23.38■■□□□ 1.33
SMARCA4-211ENST00000586921 KIAA0586Q9BVV6 1533 aa23.37■■□□□ 1.33
SMARCA4-211ENST00000586921 TTBK1Q5TCY1 1321 aaPredicted RBP23.34■■□□□ 1.33
SMARCA4-211ENST00000586921 MAP3K4Q9Y6R4 1608 aa23.34■■□□□ 1.33
SMARCA4-211ENST00000586921 SOCS7O14512 581 aa23.33■■□□□ 1.33
SMARCA4-211ENST00000586921 CUL7Q14999 1698 aa23.3■■□□□ 1.32
SMARCA4-211ENST00000586921 EPRSP07814 1512 aaKnown RBP23.29■■□□□ 1.32
SMARCA4-211ENST00000586921 ILDR2Q71H61 639 aa23.25■■□□□ 1.31
SMARCA4-211ENST00000586921 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
SMARCA4-211ENST00000586921 UHRF1BP1LA0JNW5 1464 aa23.22■■□□□ 1.31
SMARCA4-211ENST00000586921 DISP3Q9P2K9 1392 aa23.21■■□□□ 1.31
SMARCA4-211ENST00000586921 CARMIL2Q6F5E8 1435 aa23.19■■□□□ 1.3
SMARCA4-211ENST00000586921 KIF21BO75037 1637 aa23.18■■□□□ 1.3
SMARCA4-211ENST00000586921 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
SMARCA4-211ENST00000586921 PTPRMP28827 1452 aa23.13■■□□□ 1.29
SMARCA4-211ENST00000586921 KDM5BQ9UGL1 1544 aa23.13■■□□□ 1.29
SMARCA4-211ENST00000586921 PCF11O94913 1555 aaKnown RBP23.1■■□□□ 1.29
SMARCA4-211ENST00000586921 ZCCHC11Q5TAX3 1644 aaKnown RBP23.09■■□□□ 1.29
SMARCA4-211ENST00000586921 WDR7Q9Y4E6 1490 aa23.05■■□□□ 1.28
SMARCA4-211ENST00000586921 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
SMARCA4-211ENST00000586921 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
SMARCA4-211ENST00000586921 IGF1RP08069 1367 aa23.03■■□□□ 1.28
SMARCA4-211ENST00000586921 CERKQ8TCT0 537 aa23.02■■□□□ 1.28
SMARCA4-211ENST00000586921 CD109Q6YHK3 1445 aa23.01■■□□□ 1.27
SMARCA4-211ENST00000586921 IQGAP2Q13576 1575 aa22.99■■□□□ 1.27
SMARCA4-211ENST00000586921 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
SMARCA4-211ENST00000586921 DISP1Q96F81 1524 aa22.95■■□□□ 1.26
SMARCA4-211ENST00000586921 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
SMARCA4-211ENST00000586921 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
SMARCA4-211ENST00000586921 MADDQ8WXG6 1647 aa22.9■■□□□ 1.26
SMARCA4-211ENST00000586921 ARAP3Q8WWN8 1544 aa22.89■■□□□ 1.26
SMARCA4-211ENST00000586921 HSPA2P54652 639 aa22.89■■□□□ 1.25
SMARCA4-211ENST00000586921 KCNH8Q96L42 1107 aa22.88■■□□□ 1.25
SMARCA4-211ENST00000586921 BCORL1Q5H9F3 1711 aa22.87■■□□□ 1.25
SMARCA4-211ENST00000586921 CARMIL1Q5VZK9 1371 aa22.87■■□□□ 1.25
SMARCA4-211ENST00000586921 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
SMARCA4-211ENST00000586921 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
SMARCA4-211ENST00000586921 UGGT2Q9NYU1 1516 aa22.79■■□□□ 1.24
SMARCA4-211ENST00000586921 RIMS1Q86UR5 1692 aaKnown RBP22.78■■□□□ 1.24
SMARCA4-211ENST00000586921 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
SMARCA4-211ENST00000586921 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
SMARCA4-211ENST00000586921 PHLDB1Q86UU1 1377 aa22.72■■□□□ 1.23
SMARCA4-211ENST00000586921 PLPPR3Q6T4P5 718 aa22.71■■□□□ 1.23
SMARCA4-211ENST00000586921 ABCA8O94911 1581 aa22.65■■□□□ 1.22
SMARCA4-211ENST00000586921 FRMPD1Q5SYB0 1578 aa22.63■■□□□ 1.21
SMARCA4-211ENST00000586921 ARHGEF40Q8TER5 1519 aa22.62■■□□□ 1.21
SMARCA4-211ENST00000586921 NEO1Q92859 1461 aa22.6■■□□□ 1.21
SMARCA4-211ENST00000586921 ABCA9Q8IUA7 1624 aa22.59■■□□□ 1.21
SMARCA4-211ENST00000586921 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
SMARCA4-211ENST00000586921 DMRT2Q9Y5R5 561 aa22.55■■□□□ 1.2
SMARCA4-211ENST00000586921 YEATS2Q9ULM3 1422 aa22.55■■□□□ 1.2
SMARCA4-211ENST00000586921 FANCAO15360 1455 aa22.54■■□□□ 1.2
SMARCA4-211ENST00000586921 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
SMARCA4-211ENST00000586921 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
SMARCA4-211ENST00000586921 ARID3CA6NKF2 412 aa22.51■■□□□ 1.19
SMARCA4-211ENST00000586921 TTC37Q6PGP7 1564 aa22.49■■□□□ 1.19
SMARCA4-211ENST00000586921 PREX1Q8TCU6 1659 aa22.49■■□□□ 1.19
SMARCA4-211ENST00000586921 FER1L4A9Z1Z3 1794 aa22.48■■□□□ 1.19
SMARCA4-211ENST00000586921 STRCQ7RTU9 1775 aa22.48■■□□□ 1.19
SMARCA4-211ENST00000586921 AKNAQ7Z591 1439 aa22.47■■□□□ 1.19
SMARCA4-211ENST00000586921 ATP10BO94823 1461 aa22.45■■□□□ 1.18
SMARCA4-211ENST00000586921 DENND4BO75064 1496 aaPredicted RBP22.44■■□□□ 1.18
SMARCA4-211ENST00000586921 MLECQ14165 292 aa22.44■■□□□ 1.18
SMARCA4-211ENST00000586921 RICTORQ6R327 1708 aa22.44■■□□□ 1.18
SMARCA4-211ENST00000586921 SIGLEC1Q9BZZ2 1709 aa22.43■■□□□ 1.18
SMARCA4-211ENST00000586921 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
SMARCA4-211ENST00000586921 IQSEC2Q5JU85 1478 aa22.4■■□□□ 1.18
SMARCA4-211ENST00000586921 ZFYVE16Q7Z3T8 1539 aa22.39■■□□□ 1.17
SMARCA4-211ENST00000586921 FHOD3Q2V2M9 1422 aa22.39■■□□□ 1.17
SMARCA4-211ENST00000586921 EFCAB5A4FU69 1503 aa22.37■■□□□ 1.17
SMARCA4-211ENST00000586921 PTPRTO14522 1441 aa22.37■■□□□ 1.17
SMARCA4-211ENST00000586921 ZMYM4Q5VZL5 1548 aa22.36■■□□□ 1.17
SMARCA4-211ENST00000586921 LTBP4Q8N2S1 1624 aa22.36■■□□□ 1.17
SMARCA4-211ENST00000586921 FAM9AQ8IZU1 332 aaPredicted RBP22.36■■□□□ 1.17
SMARCA4-211ENST00000586921 UHRF1BP1Q6BDS2 1440 aa22.35■■□□□ 1.17
SMARCA4-211ENST00000586921 ARHGEF12Q9NZN5 1544 aa22.31■■□□□ 1.16
SMARCA4-211ENST00000586921 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
SMARCA4-211ENST00000586921 CFAP74Q9C0B2 1584 aa22.3■■□□□ 1.16
SMARCA4-211ENST00000586921 MAGI2Q86UL8 1455 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms