RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 KIAA0586Q9BVV6 1533 aa27.73■■■□□ 2.03
PRKCSH-203ENST00000586486 IQGAP2Q13576 1575 aa27.69■■■□□ 2.02
PRKCSH-203ENST00000586486 EHMT2Q96KQ7 1210 aa27.63■■■□□ 2.01
PRKCSH-203ENST00000586486 UBTFP17480 764 aaKnown RBP27.63■■■□□ 2.01
PRKCSH-203ENST00000586486 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
PRKCSH-203ENST00000586486 TNIKQ9UKE5 1360 aa27.6■■■□□ 2.01
PRKCSH-203ENST00000586486 LOC105371045A0A1W2PR82 267 aa27.56■■■□□ 2
PRKCSH-203ENST00000586486 UGGT2Q9NYU1 1516 aa27.56■■■□□ 2
PRKCSH-203ENST00000586486 JPH4Q96JJ6 628 aa27.5■■□□□ 1.99
PRKCSH-203ENST00000586486 SAMD9Q5K651 1589 aa27.45■■□□□ 1.99
PRKCSH-203ENST00000586486 EFCAB5A4FU69 1503 aa27.44■■□□□ 1.98
PRKCSH-203ENST00000586486 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
PRKCSH-203ENST00000586486 DISP1Q96F81 1524 aa27.43■■□□□ 1.98
PRKCSH-203ENST00000586486 KIAA0556O60303 1618 aa27.42■■□□□ 1.98
PRKCSH-203ENST00000586486 CARMIL2Q6F5E8 1435 aa27.39■■□□□ 1.98
PRKCSH-203ENST00000586486 CEP162Q5TB80 1403 aa27.38■■□□□ 1.97
PRKCSH-203ENST00000586486 ERCC6L2Q5T890 1561 aa27.38■■□□□ 1.97
PRKCSH-203ENST00000586486 ARHGEF11O15085 1522 aa27.37■■□□□ 1.97
PRKCSH-203ENST00000586486 CLIP1P30622 1438 aa27.35■■□□□ 1.97
PRKCSH-203ENST00000586486 ARHGAP35Q9NRY4 1499 aa27.35■■□□□ 1.97
PRKCSH-203ENST00000586486 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
PRKCSH-203ENST00000586486 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
PRKCSH-203ENST00000586486 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
PRKCSH-203ENST00000586486 RANGAP1P46060 587 aaPredicted RBP27.3■■□□□ 1.96
PRKCSH-203ENST00000586486 DNAJC5Q9H3Z4 198 aa27.24■■□□□ 1.95
PRKCSH-203ENST00000586486 FHOD3Q2V2M9 1422 aa27.23■■□□□ 1.95
PRKCSH-203ENST00000586486 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
PRKCSH-203ENST00000586486 P3H3Q8IVL6 736 aa27.19■■□□□ 1.94
PRKCSH-203ENST00000586486 PTPRGP23470 1445 aa27.17■■□□□ 1.94
PRKCSH-203ENST00000586486 FMN1Q68DA7 1419 aa27.13■■□□□ 1.93
PRKCSH-203ENST00000586486 ABCA8O94911 1581 aa27.08■■□□□ 1.93
PRKCSH-203ENST00000586486 RAPGEF6Q8TEU7 1601 aa27.04■■□□□ 1.92
PRKCSH-203ENST00000586486 PLB1Q6P1J6 1458 aa27.04■■□□□ 1.92
PRKCSH-203ENST00000586486 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
PRKCSH-203ENST00000586486 TTBK1Q5TCY1 1321 aaPredicted RBP27.03■■□□□ 1.92
PRKCSH-203ENST00000586486 VPS8Q8N3P4 1428 aa27.03■■□□□ 1.92
PRKCSH-203ENST00000586486 UHRF1BP1LA0JNW5 1464 aa27.02■■□□□ 1.92
PRKCSH-203ENST00000586486 ABCC2Q92887 1545 aa27.02■■□□□ 1.92
PRKCSH-203ENST00000586486 PCF11O94913 1555 aaKnown RBP27.01■■□□□ 1.91
PRKCSH-203ENST00000586486 ADCY10Q96PN6 1610 aa27■■□□□ 1.91
PRKCSH-203ENST00000586486 FYCO1Q9BQS8 1478 aa26.99■■□□□ 1.91
PRKCSH-203ENST00000586486 CASKIN1Q8WXD9 1431 aa26.99■■□□□ 1.91
PRKCSH-203ENST00000586486 HECW1Q76N89 1606 aa26.97■■□□□ 1.91
PRKCSH-203ENST00000586486 CYB5RLQ6IPT4 315 aa26.97■■□□□ 1.91
PRKCSH-203ENST00000586486 NUP153P49790 1475 aaKnown RBP26.93■■□□□ 1.9
PRKCSH-203ENST00000586486 KDM5BQ9UGL1 1544 aa26.88■■□□□ 1.89
PRKCSH-203ENST00000586486 LRRIQ1Q96JM4 1722 aa26.88■■□□□ 1.89
PRKCSH-203ENST00000586486 CCDC18Q5T9S5 1454 aa26.84■■□□□ 1.89
PRKCSH-203ENST00000586486 EPRSP07814 1512 aaKnown RBP26.84■■□□□ 1.89
PRKCSH-203ENST00000586486 ZCCHC11Q5TAX3 1644 aaKnown RBP26.84■■□□□ 1.89
PRKCSH-203ENST00000586486 AEBP2Q6ZN18 517 aaPredicted RBP26.83■■□□□ 1.88
PRKCSH-203ENST00000586486 ATP10BO94823 1461 aa26.81■■□□□ 1.88
PRKCSH-203ENST00000586486 CDK13Q14004 1512 aaKnown RBP26.79■■□□□ 1.88
PRKCSH-203ENST00000586486 CFAP43Q8NDM7 1665 aa26.79■■□□□ 1.88
PRKCSH-203ENST00000586486 ATP1B4Q9UN42 357 aaPredicted RBP26.77■■□□□ 1.88
PRKCSH-203ENST00000586486 MAP3K1Q13233 1512 aa26.76■■□□□ 1.88
PRKCSH-203ENST00000586486 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
PRKCSH-203ENST00000586486 MAPKBP1O60336 1514 aa26.73■■□□□ 1.87
PRKCSH-203ENST00000586486 NPM1P06748 294 aaKnown RBP eCLIP26.72■■□□□ 1.87
PRKCSH-203ENST00000586486 ARID3CA6NKF2 412 aa26.7■■□□□ 1.86
PRKCSH-203ENST00000586486 ASXL2Q76L83 1435 aa26.65■■□□□ 1.86
PRKCSH-203ENST00000586486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.64■■□□□ 1.85
PRKCSH-203ENST00000586486 HNRNPUL2Q1KMD3 747 aaKnown RBP26.64■■□□□ 1.85
PRKCSH-203ENST00000586486 WDR7Q9Y4E6 1490 aa26.63■■□□□ 1.85
PRKCSH-203ENST00000586486 MAGI3Q5TCQ9 1506 aa26.63■■□□□ 1.85
PRKCSH-203ENST00000586486 APLP2Q06481 763 aa26.62■■□□□ 1.85
PRKCSH-203ENST00000586486 CDK11AQ9UQ88 783 aaPredicted RBP26.62■■□□□ 1.85
PRKCSH-203ENST00000586486 EHBP1L1Q8N3D4 1523 aa26.6■■□□□ 1.85
PRKCSH-203ENST00000586486 TROQ12816 1431 aaPredicted RBP26.6■■□□□ 1.85
PRKCSH-203ENST00000586486 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
PRKCSH-203ENST00000586486 PLEKHD1A6NEE1 506 aa26.58■■□□□ 1.85
PRKCSH-203ENST00000586486 MTUS2Q5JR59 1369 aa26.56■■□□□ 1.84
PRKCSH-203ENST00000586486 KIF14Q15058 1648 aa26.53■■□□□ 1.84
PRKCSH-203ENST00000586486 DIP2BQ9P265 1576 aa26.5■■□□□ 1.83
PRKCSH-203ENST00000586486 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
PRKCSH-203ENST00000586486 ABCC10Q5T3U5 1492 aa26.49■■□□□ 1.83
PRKCSH-203ENST00000586486 SUPT6HQ7KZ85 1726 aaKnown RBP26.49■■□□□ 1.83
PRKCSH-203ENST00000586486 GLI2P10070 1586 aa26.47■■□□□ 1.83
PRKCSH-203ENST00000586486 ABCA9Q8IUA7 1624 aa26.46■■□□□ 1.83
PRKCSH-203ENST00000586486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.44■■□□□ 1.82
PRKCSH-203ENST00000586486 KIF13AQ9H1H9 1805 aa26.43■■□□□ 1.82
PRKCSH-203ENST00000586486 TTC37Q6PGP7 1564 aa26.42■■□□□ 1.82
PRKCSH-203ENST00000586486 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
PRKCSH-203ENST00000586486 NCOA2Q15596 1464 aa26.4■■□□□ 1.82
PRKCSH-203ENST00000586486 MAP3K4Q9Y6R4 1608 aa26.38■■□□□ 1.81
PRKCSH-203ENST00000586486 MYO5CQ9NQX4 1742 aa26.35■■□□□ 1.81
PRKCSH-203ENST00000586486 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
PRKCSH-203ENST00000586486 ITSN2Q9NZM3 1697 aa26.33■■□□□ 1.8
PRKCSH-203ENST00000586486 FAM69CQ0P6D2 419 aa26.32■■□□□ 1.8
PRKCSH-203ENST00000586486 PREX2Q70Z35 1606 aa26.32■■□□□ 1.8
PRKCSH-203ENST00000586486 ARAP3Q8WWN8 1544 aa26.31■■□□□ 1.8
PRKCSH-203ENST00000586486 CCNB3Q8WWL7 1395 aa26.29■■□□□ 1.8
PRKCSH-203ENST00000586486 GPATCH8Q9UKJ3 1502 aaKnown RBP26.29■■□□□ 1.8
PRKCSH-203ENST00000586486 PPARGC1BQ86YN6 1023 aaKnown RBP26.28■■□□□ 1.8
PRKCSH-203ENST00000586486 CD109Q6YHK3 1445 aa26.28■■□□□ 1.8
PRKCSH-203ENST00000586486 CDC42BPBQ9Y5S2 1711 aa26.27■■□□□ 1.8
PRKCSH-203ENST00000586486 PLCH2O75038 1416 aa26.26■■□□□ 1.79
PRKCSH-203ENST00000586486 PHLDB1Q86UU1 1377 aa26.26■■□□□ 1.79
PRKCSH-203ENST00000586486 MYOM3Q5VTT5 1437 aa26.26■■□□□ 1.79
PRKCSH-203ENST00000586486 PPRC1Q5VV67 1664 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms