RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 KIAA0586Q9BVV6 1533 aa28.87■■■□□ 2.21
RBFOX1-222ENST00000585867 UBTFP17480 764 aaKnown RBP28.86■■■□□ 2.21
RBFOX1-222ENST00000585867 LOC105371045A0A1W2PR82 267 aa28.85■■■□□ 2.21
RBFOX1-222ENST00000585867 CTTNBP2Q8WZ74 1663 aa28.81■■■□□ 2.2
RBFOX1-222ENST00000585867 JPH4Q96JJ6 628 aa28.77■■■□□ 2.2
RBFOX1-222ENST00000585867 IQGAP2Q13576 1575 aa28.77■■■□□ 2.2
RBFOX1-222ENST00000585867 SHROOM2Q13796 1616 aa28.7■■■□□ 2.18
RBFOX1-222ENST00000585867 DNAJC5Q9H3Z4 198 aa28.69■■■□□ 2.18
RBFOX1-222ENST00000585867 TNIKQ9UKE5 1360 aa28.65■■■□□ 2.18
RBFOX1-222ENST00000585867 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.18
RBFOX1-222ENST00000585867 PRG4Q92954 1404 aaPredicted RBP28.64■■■□□ 2.18
RBFOX1-222ENST00000585867 UGGT2Q9NYU1 1516 aa28.62■■■□□ 2.17
RBFOX1-222ENST00000585867 ARHGEF11O15085 1522 aa28.58■■■□□ 2.16
RBFOX1-222ENST00000585867 ERCC6L2Q5T890 1561 aa28.57■■■□□ 2.16
RBFOX1-222ENST00000585867 CARMIL2Q6F5E8 1435 aa28.55■■■□□ 2.16
RBFOX1-222ENST00000585867 DISP1Q96F81 1524 aa28.53■■■□□ 2.16
RBFOX1-222ENST00000585867 RIMBP3CA6NJZ7 1639 aa28.53■■■□□ 2.16
RBFOX1-222ENST00000585867 RIMBP3BA6NNM3 1639 aa28.53■■■□□ 2.16
RBFOX1-222ENST00000585867 RIMBP3Q9UFD9 1639 aa28.53■■■□□ 2.16
RBFOX1-222ENST00000585867 P3H3Q8IVL6 736 aa28.49■■■□□ 2.15
RBFOX1-222ENST00000585867 KIAA0556O60303 1618 aa28.48■■■□□ 2.15
RBFOX1-222ENST00000585867 SAMD9Q5K651 1589 aa28.46■■■□□ 2.15
RBFOX1-222ENST00000585867 EFCAB5A4FU69 1503 aa28.43■■■□□ 2.14
RBFOX1-222ENST00000585867 TTBK1Q5TCY1 1321 aaPredicted RBP28.42■■■□□ 2.14
RBFOX1-222ENST00000585867 CLIP1P30622 1438 aa28.41■■■□□ 2.14
RBFOX1-222ENST00000585867 CEP162Q5TB80 1403 aa28.4■■■□□ 2.14
RBFOX1-222ENST00000585867 ARHGAP35Q9NRY4 1499 aa28.4■■■□□ 2.14
RBFOX1-222ENST00000585867 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
RBFOX1-222ENST00000585867 PTPRGP23470 1445 aa28.38■■■□□ 2.13
RBFOX1-222ENST00000585867 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
RBFOX1-222ENST00000585867 FHOD3Q2V2M9 1422 aa28.36■■■□□ 2.13
RBFOX1-222ENST00000585867 FMN1Q68DA7 1419 aa28.19■■■□□ 2.1
RBFOX1-222ENST00000585867 UACAQ9BZF9 1416 aa28.18■■■□□ 2.1
RBFOX1-222ENST00000585867 PLB1Q6P1J6 1458 aa28.18■■■□□ 2.1
RBFOX1-222ENST00000585867 ABCA8O94911 1581 aa28.14■■■□□ 2.1
RBFOX1-222ENST00000585867 RAPGEF6Q8TEU7 1601 aa28.11■■■□□ 2.09
RBFOX1-222ENST00000585867 UHRF1BP1LA0JNW5 1464 aa28.1■■■□□ 2.09
RBFOX1-222ENST00000585867 ABCC2Q92887 1545 aa28.1■■■□□ 2.09
RBFOX1-222ENST00000585867 ADCY10Q96PN6 1610 aa28.1■■■□□ 2.09
RBFOX1-222ENST00000585867 ATP1B4Q9UN42 357 aaPredicted RBP28.07■■■□□ 2.08
RBFOX1-222ENST00000585867 NPM1P06748 294 aaKnown RBP eCLIP28.03■■■□□ 2.08
RBFOX1-222ENST00000585867 CASKIN1Q8WXD9 1431 aa28.03■■■□□ 2.08
RBFOX1-222ENST00000585867 VPS8Q8N3P4 1428 aa28.02■■■□□ 2.08
RBFOX1-222ENST00000585867 ARID3CA6NKF2 412 aa28.02■■■□□ 2.08
RBFOX1-222ENST00000585867 PCF11O94913 1555 aaKnown RBP28.01■■■□□ 2.07
RBFOX1-222ENST00000585867 NUP153P49790 1475 aaKnown RBP28■■■□□ 2.07
RBFOX1-222ENST00000585867 HECW1Q76N89 1606 aa27.98■■■□□ 2.07
RBFOX1-222ENST00000585867 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
RBFOX1-222ENST00000585867 FYCO1Q9BQS8 1478 aa27.97■■■□□ 2.07
RBFOX1-222ENST00000585867 ATP10BO94823 1461 aa27.95■■■□□ 2.06
RBFOX1-222ENST00000585867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.94■■■□□ 2.06
RBFOX1-222ENST00000585867 HNRNPUL2Q1KMD3 747 aaKnown RBP27.94■■■□□ 2.06
RBFOX1-222ENST00000585867 ZCCHC11Q5TAX3 1644 aaKnown RBP27.93■■■□□ 2.06
RBFOX1-222ENST00000585867 EPRSP07814 1512 aaKnown RBP27.91■■■□□ 2.06
RBFOX1-222ENST00000585867 LRRIQ1Q96JM4 1722 aa27.88■■■□□ 2.05
RBFOX1-222ENST00000585867 CDK13Q14004 1512 aaKnown RBP27.87■■■□□ 2.05
RBFOX1-222ENST00000585867 CCDC18Q5T9S5 1454 aa27.84■■■□□ 2.05
RBFOX1-222ENST00000585867 MAPKBP1O60336 1514 aa27.81■■■□□ 2.04
RBFOX1-222ENST00000585867 ASXL2Q76L83 1435 aa27.81■■■□□ 2.04
RBFOX1-222ENST00000585867 PLEKHD1A6NEE1 506 aa27.79■■■□□ 2.04
RBFOX1-222ENST00000585867 CDK11AQ9UQ88 783 aaPredicted RBP27.78■■■□□ 2.04
RBFOX1-222ENST00000585867 APLP2Q06481 763 aa27.77■■■□□ 2.04
RBFOX1-222ENST00000585867 WDR7Q9Y4E6 1490 aa27.73■■■□□ 2.03
RBFOX1-222ENST00000585867 TIAM1Q13009 1591 aa27.71■■■□□ 2.03
RBFOX1-222ENST00000585867 KCNH8Q96L42 1107 aa27.71■■■□□ 2.03
RBFOX1-222ENST00000585867 MAP3K1Q13233 1512 aa27.7■■■□□ 2.02
RBFOX1-222ENST00000585867 CFAP43Q8NDM7 1665 aa27.69■■■□□ 2.02
RBFOX1-222ENST00000585867 MAGI3Q5TCQ9 1506 aa27.66■■■□□ 2.02
RBFOX1-222ENST00000585867 TROQ12816 1431 aaPredicted RBP27.65■■■□□ 2.02
RBFOX1-222ENST00000585867 MTUS2Q5JR59 1369 aa27.65■■■□□ 2.02
RBFOX1-222ENST00000585867 ABCC10Q5T3U5 1492 aa27.64■■■□□ 2.02
RBFOX1-222ENST00000585867 KANK4Q5T7N3 995 aaPredicted RBP27.63■■■□□ 2.01
RBFOX1-222ENST00000585867 TRHP20396 242 aaPredicted RBP27.61■■■□□ 2.01
RBFOX1-222ENST00000585867 FAM69CQ0P6D2 419 aa27.61■■■□□ 2.01
RBFOX1-222ENST00000585867 LRRC9Q6ZRR7 1453 aa27.6■■■□□ 2.01
RBFOX1-222ENST00000585867 DIP2BQ9P265 1576 aa27.6■■■□□ 2.01
RBFOX1-222ENST00000585867 EHBP1L1Q8N3D4 1523 aa27.57■■■□□ 2
RBFOX1-222ENST00000585867 GLI2P10070 1586 aa27.54■■■□□ 2
RBFOX1-222ENST00000585867 KIF13AQ9H1H9 1805 aa27.54■■■□□ 2
RBFOX1-222ENST00000585867 KIF14Q15058 1648 aa27.54■■■□□ 2
RBFOX1-222ENST00000585867 TRIM26Q12899 539 aaPredicted RBP27.52■■■□□ 2
RBFOX1-222ENST00000585867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.51■■□□□ 1.99
RBFOX1-222ENST00000585867 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
RBFOX1-222ENST00000585867 ABCA9Q8IUA7 1624 aa27.49■■□□□ 1.99
RBFOX1-222ENST00000585867 SUPT6HQ7KZ85 1726 aaKnown RBP27.46■■□□□ 1.99
RBFOX1-222ENST00000585867 TTC37Q6PGP7 1564 aa27.46■■□□□ 1.99
RBFOX1-222ENST00000585867 CD109Q6YHK3 1445 aa27.45■■□□□ 1.99
RBFOX1-222ENST00000585867 MAP3K4Q9Y6R4 1608 aa27.45■■□□□ 1.98
RBFOX1-222ENST00000585867 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
RBFOX1-222ENST00000585867 CCNB3Q8WWL7 1395 aa27.39■■□□□ 1.98
RBFOX1-222ENST00000585867 TSPOAP1O95153 1857 aa27.39■■□□□ 1.97
RBFOX1-222ENST00000585867 PLCH2O75038 1416 aa27.36■■□□□ 1.97
RBFOX1-222ENST00000585867 MYO5CQ9NQX4 1742 aa27.36■■□□□ 1.97
RBFOX1-222ENST00000585867 GPATCH8Q9UKJ3 1502 aaKnown RBP27.35■■□□□ 1.97
RBFOX1-222ENST00000585867 PCGF6Q9BYE7 350 aa27.34■■□□□ 1.97
RBFOX1-222ENST00000585867 CDC42BPAQ5VT25 1732 aa27.33■■□□□ 1.97
RBFOX1-222ENST00000585867 PPRC1Q5VV67 1664 aaKnown RBP27.32■■□□□ 1.96
RBFOX1-222ENST00000585867 CDC42BPBQ9Y5S2 1711 aa27.3■■□□□ 1.96
RBFOX1-222ENST00000585867 PREX2Q70Z35 1606 aa27.3■■□□□ 1.96
RBFOX1-222ENST00000585867 PHLDB1Q86UU1 1377 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms