RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.83
SRSF1-205ENST00000582730 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
SRSF1-205ENST00000582730 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
SRSF1-205ENST00000582730 CUL7Q14999 1698 aa20.26■□□□□ 0.83
SRSF1-205ENST00000582730 RRBP1Q9P2E9 1410 aaKnown RBP20.25■□□□□ 0.83
SRSF1-205ENST00000582730 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
SRSF1-205ENST00000582730 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
SRSF1-205ENST00000582730 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
SRSF1-205ENST00000582730 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
SRSF1-205ENST00000582730 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
SRSF1-205ENST00000582730 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
SRSF1-205ENST00000582730 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
SRSF1-205ENST00000582730 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
SRSF1-205ENST00000582730 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
SRSF1-205ENST00000582730 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
SRSF1-205ENST00000582730 GTF3C3Q9Y5Q9 886 aa20.15■□□□□ 0.82
SRSF1-205ENST00000582730 EFCAB5A4FU69 1503 aa20.14■□□□□ 0.82
SRSF1-205ENST00000582730 MAP3K1Q13233 1512 aa20.14■□□□□ 0.82
SRSF1-205ENST00000582730 PHLDB1Q86UU1 1377 aa20.12■□□□□ 0.81
SRSF1-205ENST00000582730 CENPBP07199 599 aaPredicted RBP20.09■□□□□ 0.81
SRSF1-205ENST00000582730 FYCO1Q9BQS8 1478 aa20.09■□□□□ 0.81
SRSF1-205ENST00000582730 AQRO60306 1485 aaKnown RBP eCLIP20.08■□□□□ 0.87e-10■■■■■ 31
SRSF1-205ENST00000582730 CASKIN1Q8WXD9 1431 aa20.08■□□□□ 0.8
SRSF1-205ENST00000582730 FMN1Q68DA7 1419 aa20.07■□□□□ 0.8
SRSF1-205ENST00000582730 CFAP43Q8NDM7 1665 aa20.07■□□□□ 0.8
SRSF1-205ENST00000582730 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
SRSF1-205ENST00000582730 MRC2Q9UBG0 1479 aa20.06■□□□□ 0.8
SRSF1-205ENST00000582730 MYT1Q01538 1121 aa20.05■□□□□ 0.8
SRSF1-205ENST00000582730 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
SRSF1-205ENST00000582730 RAB3GAP2Q9H2M9 1393 aa20.03■□□□□ 0.8
SRSF1-205ENST00000582730 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
SRSF1-205ENST00000582730 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
SRSF1-205ENST00000582730 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
SRSF1-205ENST00000582730 SAMD9Q5K651 1589 aa19.96■□□□□ 0.79
SRSF1-205ENST00000582730 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
SRSF1-205ENST00000582730 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
SRSF1-205ENST00000582730 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
SRSF1-205ENST00000582730 ARID3CA6NKF2 412 aa19.93■□□□□ 0.78
SRSF1-205ENST00000582730 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
SRSF1-205ENST00000582730 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
SRSF1-205ENST00000582730 IFT140Q96RY7 1462 aa19.89■□□□□ 0.78
SRSF1-205ENST00000582730 YTHDC1Q96MU7 727 aaKnown RBP19.88■□□□□ 0.77
SRSF1-205ENST00000582730 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
SRSF1-205ENST00000582730 IQGAP2Q13576 1575 aa19.87■□□□□ 0.77
SRSF1-205ENST00000582730 MIER1Q8N108 512 aa19.87■□□□□ 0.77
SRSF1-205ENST00000582730 WDR62O43379 1518 aa19.85■□□□□ 0.77
SRSF1-205ENST00000582730 LRRIQ1Q96JM4 1722 aa19.84■□□□□ 0.77
SRSF1-205ENST00000582730 NCOA2Q15596 1464 aa19.83■□□□□ 0.77
SRSF1-205ENST00000582730 FBLN2P98095 1184 aa19.81■□□□□ 0.76
SRSF1-205ENST00000582730 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
SRSF1-205ENST00000582730 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
SRSF1-205ENST00000582730 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
SRSF1-205ENST00000582730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.76
SRSF1-205ENST00000582730 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
SRSF1-205ENST00000582730 EHBP1L1Q8N3D4 1523 aa19.78■□□□□ 0.76
SRSF1-205ENST00000582730 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
SRSF1-205ENST00000582730 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
SRSF1-205ENST00000582730 CCDC18Q5T9S5 1454 aa19.76■□□□□ 0.75
SRSF1-205ENST00000582730 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
SRSF1-205ENST00000582730 HECW1Q76N89 1606 aa19.75■□□□□ 0.75
SRSF1-205ENST00000582730 CDK13Q14004 1512 aaKnown RBP19.74■□□□□ 0.75
SRSF1-205ENST00000582730 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
SRSF1-205ENST00000582730 EPRSP07814 1512 aaKnown RBP19.73■□□□□ 0.75
SRSF1-205ENST00000582730 PTPRKQ15262 1439 aa19.72■□□□□ 0.75
SRSF1-205ENST00000582730 CHIC2Q9UKJ5 165 aa19.72■□□□□ 0.75
SRSF1-205ENST00000582730 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
SRSF1-205ENST00000582730 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
SRSF1-205ENST00000582730 UGGT2Q9NYU1 1516 aa19.7■□□□□ 0.74
SRSF1-205ENST00000582730 RRP7BPQ9NSQ0 103 aa19.68■□□□□ 0.74
SRSF1-205ENST00000582730 PTPN23Q9H3S7 1636 aa19.67■□□□□ 0.74
SRSF1-205ENST00000582730 HFM1A2PYH4 1435 aa19.65■□□□□ 0.74
SRSF1-205ENST00000582730 KIAA0556O60303 1618 aa19.65■□□□□ 0.74
SRSF1-205ENST00000582730 DISP1Q96F81 1524 aa19.64■□□□□ 0.74
SRSF1-205ENST00000582730 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
SRSF1-205ENST00000582730 NAIPQ13075 1403 aa19.62■□□□□ 0.73
SRSF1-205ENST00000582730 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
SRSF1-205ENST00000582730 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
SRSF1-205ENST00000582730 TRIM52Q96A61 297 aa19.6■□□□□ 0.73
SRSF1-205ENST00000582730 UACAQ9BZF9 1416 aa19.59■□□□□ 0.73
SRSF1-205ENST00000582730 TONSLQ96HA7 1378 aa19.58■□□□□ 0.72
SRSF1-205ENST00000582730 CDK11AQ9UQ88 783 aaPredicted RBP19.58■□□□□ 0.72
SRSF1-205ENST00000582730 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
SRSF1-205ENST00000582730 NUP153P49790 1475 aaKnown RBP19.56■□□□□ 0.72
SRSF1-205ENST00000582730 HIRIP3Q9BW71 556 aaPredicted RBP19.56■□□□□ 0.72
SRSF1-205ENST00000582730 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
SRSF1-205ENST00000582730 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
SRSF1-205ENST00000582730 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
SRSF1-205ENST00000582730 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
SRSF1-205ENST00000582730 MIA2Q96PC5 1412 aa19.53■□□□□ 0.72
SRSF1-205ENST00000582730 PPP1R15AO75807 674 aaPredicted RBP19.52■□□□□ 0.72
SRSF1-205ENST00000582730 PLB1Q6P1J6 1458 aa19.52■□□□□ 0.72
SRSF1-205ENST00000582730 ZNF644Q9H582 1327 aaPredicted RBP19.51■□□□□ 0.71
SRSF1-205ENST00000582730 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
SRSF1-205ENST00000582730 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
SRSF1-205ENST00000582730 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
SRSF1-205ENST00000582730 DDX10Q13206 875 aaKnown RBP19.48■□□□□ 0.71
SRSF1-205ENST00000582730 NUP160Q12769 1436 aa19.46■□□□□ 0.71
SRSF1-205ENST00000582730 CFDP1Q9UEE9 299 aaPredicted RBP19.45■□□□□ 0.7
SRSF1-205ENST00000582730 TROQ12816 1431 aaPredicted RBP19.43■□□□□ 0.7
SRSF1-205ENST00000582730 KDM6BO15054 1643 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms