RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 SYNJ1O43426 1573 aa8.1□□□□□ -1.11
CTC1-209ENST00000581729 ABCC8Q09428 1581 aa8.1□□□□□ -1.11
CTC1-209ENST00000581729 SOGA1O94964 1423 aa8.07□□□□□ -1.12
CTC1-209ENST00000581729 KDM4FA0A1W2PPD8 638 aa8.07□□□□□ -1.12
CTC1-209ENST00000581729 CHMP7Q8WUX9 453 aaPredicted RBP8.07□□□□□ -1.12
CTC1-209ENST00000581729 CHRDL2Q6WN34 429 aa8.06□□□□□ -1.12
CTC1-209ENST00000581729 SYNJ2O15056 1496 aa8.06□□□□□ -1.12
CTC1-209ENST00000581729 FGD5Q6ZNL6 1462 aa8.06□□□□□ -1.12
CTC1-209ENST00000581729 MAGI1Q96QZ7 1491 aaPredicted RBP8.06□□□□□ -1.12
CTC1-209ENST00000581729 KIF13AQ9H1H9 1805 aa8.03□□□□□ -1.12
CTC1-209ENST00000581729 GRIN2BQ13224 1484 aa8.03□□□□□ -1.12
CTC1-209ENST00000581729 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
CTC1-209ENST00000581729 SPINK5Q9NQ38 1064 aaPredicted RBP8.02□□□□□ -1.13
CTC1-209ENST00000581729 CUX1P39880 1505 aa8.02□□□□□ -1.13
CTC1-209ENST00000581729 CEP170Q5SW79 1584 aa8□□□□□ -1.13
CTC1-209ENST00000581729 WDR97A6NE52 1622 aa8□□□□□ -1.13
CTC1-209ENST00000581729 PBRM1Q86U86 1689 aa7.98□□□□□ -1.13
CTC1-209ENST00000581729 RBM42Q9BTD8 480 aaKnown RBP7.97□□□□□ -1.13
CTC1-209ENST00000581729 GRIN2AQ12879 1464 aa7.96□□□□□ -1.13
CTC1-209ENST00000581729 NUP160Q12769 1436 aa7.95□□□□□ -1.14
CTC1-209ENST00000581729 SHROOM2Q13796 1616 aa7.95□□□□□ -1.14
CTC1-209ENST00000581729 ABCA5Q8WWZ7 1642 aa7.95□□□□□ -1.14
CTC1-209ENST00000581729 ABCC10Q5T3U5 1492 aa7.94□□□□□ -1.14
CTC1-209ENST00000581729 FAM69CQ0P6D2 419 aa7.94□□□□□ -1.14
CTC1-209ENST00000581729 DIP2BQ9P265 1576 aa7.93□□□□□ -1.14
CTC1-209ENST00000581729 ADAMTS12P58397 1594 aa7.93□□□□□ -1.14
CTC1-209ENST00000581729 ABCA10Q8WWZ4 1543 aa7.92□□□□□ -1.14
CTC1-209ENST00000581729 KDM6BO15054 1643 aa7.92□□□□□ -1.14
CTC1-209ENST00000581729 HECW2Q9P2P5 1572 aa7.9□□□□□ -1.14
CTC1-209ENST00000581729 ADGRL1O94910 1474 aa7.89□□□□□ -1.15
CTC1-209ENST00000581729 PRG4Q92954 1404 aaPredicted RBP7.89□□□□□ -1.15
CTC1-209ENST00000581729 MAPKBP1O60336 1514 aa7.88□□□□□ -1.15
CTC1-209ENST00000581729 ADCY10Q96PN6 1610 aa7.88□□□□□ -1.15
CTC1-209ENST00000581729 U3KPZ7 1027 aaPredicted RBP7.87□□□□□ -1.15
CTC1-209ENST00000581729 ABCB7O75027 752 aa7.86□□□□□ -1.15
CTC1-209ENST00000581729 TSPOAP1O95153 1857 aa7.85□□□□□ -1.15
CTC1-209ENST00000581729 HAX1O00165 279 aa7.85□□□□□ -1.15
CTC1-209ENST00000581729 COL17A1Q9UMD9 1497 aaPredicted RBP7.85□□□□□ -1.15
CTC1-209ENST00000581729 FHAD1B1AJZ9 1412 aa7.84□□□□□ -1.15
CTC1-209ENST00000581729 JPH4Q96JJ6 628 aa7.83□□□□□ -1.16
CTC1-209ENST00000581729 RUSC2Q8N2Y8 1516 aa7.83□□□□□ -1.16
CTC1-209ENST00000581729 PPRC1Q5VV67 1664 aaKnown RBP7.83□□□□□ -1.16
CTC1-209ENST00000581729 NPM1P06748 294 aaKnown RBP eCLIP7.78□□□□□ -1.16
CTC1-209ENST00000581729 APLP2Q06481 763 aa7.78□□□□□ -1.16
CTC1-209ENST00000581729 FBXO41Q8TF61 875 aa7.78□□□□□ -1.16
CTC1-209ENST00000581729 ZNF219Q9P2Y4 722 aaPredicted RBP7.78□□□□□ -1.16
CTC1-209ENST00000581729 ERICH3Q5RHP9 1530 aa7.78□□□□□ -1.16
CTC1-209ENST00000581729 WRNQ14191 1432 aaPredicted RBP eCLIP7.78□□□□□ -1.16
CTC1-209ENST00000581729 ASXL2Q76L83 1435 aa7.75□□□□□ -1.17
CTC1-209ENST00000581729 TTBK1Q5TCY1 1321 aaPredicted RBP7.74□□□□□ -1.17
CTC1-209ENST00000581729 TOP2BQ02880 1626 aa7.74□□□□□ -1.17
CTC1-209ENST00000581729 BIVM-ERCC5R4GMW8 1640 aa7.73□□□□□ -1.17
CTC1-209ENST00000581729 ABCC2Q92887 1545 aa7.73□□□□□ -1.17
CTC1-209ENST00000581729 GLI2P10070 1586 aa7.72□□□□□ -1.17
CTC1-209ENST00000581729 ILDR2Q71H61 639 aa7.72□□□□□ -1.17
CTC1-209ENST00000581729 LMTK3Q96Q04 1460 aa7.71□□□□□ -1.18
CTC1-209ENST00000581729 LHX8Q68G74 356 aa7.71□□□□□ -1.18
CTC1-209ENST00000581729 EPRSP07814 1512 aaKnown RBP7.7□□□□□ -1.18
CTC1-209ENST00000581729 KIAA0586Q9BVV6 1533 aa7.7□□□□□ -1.18
CTC1-209ENST00000581729 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
CTC1-209ENST00000581729 PTPRGP23470 1445 aa7.69□□□□□ -1.18
CTC1-209ENST00000581729 CUL7Q14999 1698 aa7.69□□□□□ -1.18
CTC1-209ENST00000581729 PLB1Q6P1J6 1458 aa7.68□□□□□ -1.18
CTC1-209ENST00000581729 NCBP3Q53F19 620 aaKnown RBP7.67□□□□□ -1.18
CTC1-209ENST00000581729 KIF21BO75037 1637 aa7.66□□□□□ -1.18
CTC1-209ENST00000581729 UHRF1BP1LA0JNW5 1464 aa7.65□□□□□ -1.18
CTC1-209ENST00000581729 PIP4P2Q8N4L2 257 aa7.65□□□□□ -1.18
CTC1-209ENST00000581729 IGF1RP08069 1367 aa7.64□□□□□ -1.19
CTC1-209ENST00000581729 TNIKQ9UKE5 1360 aa7.64□□□□□ -1.19
CTC1-209ENST00000581729 KDM5BQ9UGL1 1544 aa7.63□□□□□ -1.19
CTC1-209ENST00000581729 PTPRMP28827 1452 aa7.63□□□□□ -1.19
CTC1-209ENST00000581729 TEX14Q8IWB6 1497 aa7.63□□□□□ -1.19
CTC1-209ENST00000581729 UACAQ9BZF9 1416 aa7.63□□□□□ -1.19
CTC1-209ENST00000581729 ZCCHC11Q5TAX3 1644 aaKnown RBP7.63□□□□□ -1.19
CTC1-209ENST00000581729 DISP1Q96F81 1524 aa7.62□□□□□ -1.19
CTC1-209ENST00000581729 SOCS7O14512 581 aa7.62□□□□□ -1.19
CTC1-209ENST00000581729 DISP3Q9P2K9 1392 aa7.6□□□□□ -1.19
CTC1-209ENST00000581729 PCF11O94913 1555 aaKnown RBP7.6□□□□□ -1.19
CTC1-209ENST00000581729 ADAMTSL3P82987 1691 aa7.6□□□□□ -1.19
CTC1-209ENST00000581729 HSPA2P54652 639 aa7.59□□□□□ -1.19
CTC1-209ENST00000581729 WDR7Q9Y4E6 1490 aa7.59□□□□□ -1.19
CTC1-209ENST00000581729 MAGI3Q5TCQ9 1506 aa7.58□□□□□ -1.2
CTC1-209ENST00000581729 CARMIL2Q6F5E8 1435 aa7.58□□□□□ -1.2
CTC1-209ENST00000581729 IQGAP2Q13576 1575 aa7.58□□□□□ -1.2
CTC1-209ENST00000581729 MADDQ8WXG6 1647 aa7.57□□□□□ -1.2
CTC1-209ENST00000581729 CD109Q6YHK3 1445 aa7.57□□□□□ -1.2
CTC1-209ENST00000581729 CERKQ8TCT0 537 aa7.56□□□□□ -1.2
CTC1-209ENST00000581729 CARMIL1Q5VZK9 1371 aa7.56□□□□□ -1.2
CTC1-209ENST00000581729 SUPT5HO00267 1087 aaKnown RBP7.55□□□□□ -1.2
CTC1-209ENST00000581729 AKT1S1Q96B36 256 aa7.55□□□□□ -1.2
CTC1-209ENST00000581729 KIAA0556O60303 1618 aa7.55□□□□□ -1.2
CTC1-209ENST00000581729 KIF27Q86VH2 1401 aa7.54□□□□□ -1.2
CTC1-209ENST00000581729 KCNH8Q96L42 1107 aa7.54□□□□□ -1.2
CTC1-209ENST00000581729 ARAP3Q8WWN8 1544 aa7.53□□□□□ -1.2
CTC1-209ENST00000581729 BCORL1Q5H9F3 1711 aa7.53□□□□□ -1.2
CTC1-209ENST00000581729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.53□□□□□ -1.2
CTC1-209ENST00000581729 HNRNPUL2Q1KMD3 747 aaKnown RBP7.53□□□□□ -1.2
CTC1-209ENST00000581729 FRMPD1Q5SYB0 1578 aa7.53□□□□□ -1.2
CTC1-209ENST00000581729 SPATA31D1Q6ZQQ2 1576 aa7.53□□□□□ -1.2
CTC1-209ENST00000581729 CFAP43Q8NDM7 1665 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms