RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
TOP3A-210ENST00000580713 WRNQ14191 1432 aaPredicted RBP eCLIP19.48■□□□□ 0.71
TOP3A-210ENST00000580713 NPM1P06748 294 aaKnown RBP eCLIP19.47■□□□□ 0.71
TOP3A-210ENST00000580713 PRG4Q92954 1404 aaPredicted RBP19.46■□□□□ 0.71
TOP3A-210ENST00000580713 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
TOP3A-210ENST00000580713 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
TOP3A-210ENST00000580713 KDM4FA0A1W2PPD8 638 aa19.39■□□□□ 0.69
TOP3A-210ENST00000580713 ABCC10Q5T3U5 1492 aa19.39■□□□□ 0.69
TOP3A-210ENST00000580713 ILDR1Q86SU0 546 aaPredicted RBP19.37■□□□□ 0.69
TOP3A-210ENST00000580713 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
TOP3A-210ENST00000580713 KDM6BO15054 1643 aa19.3■□□□□ 0.68
TOP3A-210ENST00000580713 MSH5O43196 834 aa19.3■□□□□ 0.68
TOP3A-210ENST00000580713 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
TOP3A-210ENST00000580713 DIP2BQ9P265 1576 aa19.29■□□□□ 0.68
TOP3A-210ENST00000580713 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
TOP3A-210ENST00000580713 SUPT5HO00267 1087 aaKnown RBP19.28■□□□□ 0.68
TOP3A-210ENST00000580713 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.68
TOP3A-210ENST00000580713 ADCY10Q96PN6 1610 aa19.23■□□□□ 0.67
TOP3A-210ENST00000580713 TSPOAP1O95153 1857 aa19.23■□□□□ 0.67
TOP3A-210ENST00000580713 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
TOP3A-210ENST00000580713 TTBK1Q5TCY1 1321 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-210ENST00000580713 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
TOP3A-210ENST00000580713 PTPRGP23470 1445 aa19.1■□□□□ 0.65
TOP3A-210ENST00000580713 ADGRL1O94910 1474 aa19.08■□□□□ 0.64
TOP3A-210ENST00000580713 ASXL2Q76L83 1435 aa19.03■□□□□ 0.64
TOP3A-210ENST00000580713 IGF1RP08069 1367 aa19.03■□□□□ 0.64
TOP3A-210ENST00000580713 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
TOP3A-210ENST00000580713 ABCC2Q92887 1545 aa19.01■□□□□ 0.63
TOP3A-210ENST00000580713 TNIKQ9UKE5 1360 aa19.01■□□□□ 0.63
TOP3A-210ENST00000580713 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
TOP3A-210ENST00000580713 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
TOP3A-210ENST00000580713 GLI2P10070 1586 aa18.97■□□□□ 0.63
TOP3A-210ENST00000580713 HECW2Q9P2P5 1572 aa18.97■□□□□ 0.63
TOP3A-210ENST00000580713 PPRC1Q5VV67 1664 aaKnown RBP18.96■□□□□ 0.63
TOP3A-210ENST00000580713 CUL7Q14999 1698 aa18.95■□□□□ 0.62
TOP3A-210ENST00000580713 COL17A1Q9UMD9 1497 aaPredicted RBP18.94■□□□□ 0.62
TOP3A-210ENST00000580713 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
TOP3A-210ENST00000580713 UACAQ9BZF9 1416 aa18.91■□□□□ 0.62
TOP3A-210ENST00000580713 UHRF1BP1LA0JNW5 1464 aa18.9■□□□□ 0.62
TOP3A-210ENST00000580713 TEX14Q8IWB6 1497 aa18.9■□□□□ 0.62
TOP3A-210ENST00000580713 EPRSP07814 1512 aaKnown RBP18.89■□□□□ 0.61
TOP3A-210ENST00000580713 IQGAP2Q13576 1575 aa18.85■□□□□ 0.61
TOP3A-210ENST00000580713 MAP3K4Q9Y6R4 1608 aa18.83■□□□□ 0.61
TOP3A-210ENST00000580713 KDM5BQ9UGL1 1544 aa18.81■□□□□ 0.6
TOP3A-210ENST00000580713 FBXO41Q8TF61 875 aa18.8■□□□□ 0.6
TOP3A-210ENST00000580713 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
TOP3A-210ENST00000580713 ZCCHC11Q5TAX3 1644 aaKnown RBP18.77■□□□□ 0.6
TOP3A-210ENST00000580713 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
TOP3A-210ENST00000580713 WDR7Q9Y4E6 1490 aa18.74■□□□□ 0.59
TOP3A-210ENST00000580713 CD109Q6YHK3 1445 aa18.73■□□□□ 0.59
TOP3A-210ENST00000580713 UGGT2Q9NYU1 1516 aa18.69■□□□□ 0.58
TOP3A-210ENST00000580713 MAGI3Q5TCQ9 1506 aa18.67■□□□□ 0.58
TOP3A-210ENST00000580713 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
TOP3A-210ENST00000580713 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
TOP3A-210ENST00000580713 KIF21BO75037 1637 aa18.63■□□□□ 0.57
TOP3A-210ENST00000580713 CFAP43Q8NDM7 1665 aa18.62■□□□□ 0.57
TOP3A-210ENST00000580713 PTPRMP28827 1452 aa18.57■□□□□ 0.56
TOP3A-210ENST00000580713 ARID3CA6NKF2 412 aa18.56■□□□□ 0.56
TOP3A-210ENST00000580713 ARID4BQ4LE39 1312 aaPredicted RBP18.54■□□□□ 0.56
TOP3A-210ENST00000580713 GOLGA3Q08378 1498 aa18.54■□□□□ 0.56
TOP3A-210ENST00000580713 ABCA8O94911 1581 aa18.53■□□□□ 0.56
TOP3A-210ENST00000580713 FAM9AQ8IZU1 332 aaPredicted RBP18.53■□□□□ 0.56
TOP3A-210ENST00000580713 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
TOP3A-210ENST00000580713 RAPGEF3O95398 923 aa18.51■□□□□ 0.55
TOP3A-210ENST00000580713 ADAMTSL3P82987 1691 aa18.49■□□□□ 0.55
TOP3A-210ENST00000580713 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
TOP3A-210ENST00000580713 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
TOP3A-210ENST00000580713 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
TOP3A-210ENST00000580713 CTTNBP2Q8WZ74 1663 aa18.45■□□□□ 0.54
TOP3A-210ENST00000580713 P3H3Q8IVL6 736 aa18.45■□□□□ 0.54
TOP3A-210ENST00000580713 LMTK3Q96Q04 1460 aa18.45■□□□□ 0.54
TOP3A-210ENST00000580713 ATP10BO94823 1461 aa18.42■□□□□ 0.54
TOP3A-210ENST00000580713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.42■□□□□ 0.54
TOP3A-210ENST00000580713 HSPA2P54652 639 aa18.42■□□□□ 0.54
TOP3A-210ENST00000580713 HNRNPUL2Q1KMD3 747 aaKnown RBP18.42■□□□□ 0.54
TOP3A-210ENST00000580713 MADDQ8WXG6 1647 aa18.41■□□□□ 0.54
TOP3A-210ENST00000580713 BCORL1Q5H9F3 1711 aa18.4■□□□□ 0.54
TOP3A-210ENST00000580713 NEO1Q92859 1461 aa18.38■□□□□ 0.53
TOP3A-210ENST00000580713 ABCA9Q8IUA7 1624 aa18.38■□□□□ 0.53
TOP3A-210ENST00000580713 CERKQ8TCT0 537 aa18.37■□□□□ 0.53
TOP3A-210ENST00000580713 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
TOP3A-210ENST00000580713 FRMPD1Q5SYB0 1578 aa18.31■□□□□ 0.52
TOP3A-210ENST00000580713 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
TOP3A-210ENST00000580713 DENND4BO75064 1496 aaPredicted RBP18.29■□□□□ 0.52
TOP3A-210ENST00000580713 PRXQ9BXM0 1461 aa18.29■□□□□ 0.52
TOP3A-210ENST00000580713 MLECQ14165 292 aa18.29■□□□□ 0.52
TOP3A-210ENST00000580713 POGZQ7Z3K3 1410 aa18.29■□□□□ 0.52
TOP3A-210ENST00000580713 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
TOP3A-210ENST00000580713 ILDR2Q71H61 639 aa18.26■□□□□ 0.51
TOP3A-210ENST00000580713 AKNAQ7Z591 1439 aa18.25■□□□□ 0.51
TOP3A-210ENST00000580713 FANCAO15360 1455 aa18.25■□□□□ 0.51
TOP3A-210ENST00000580713 RAPGEF6Q8TEU7 1601 aa18.24■□□□□ 0.51
TOP3A-210ENST00000580713 PLEKHD1A6NEE1 506 aa18.24■□□□□ 0.51
TOP3A-210ENST00000580713 SOCS7O14512 581 aa18.24■□□□□ 0.51
TOP3A-210ENST00000580713 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
TOP3A-210ENST00000580713 FHOD3Q2V2M9 1422 aa18.22■□□□□ 0.51
TOP3A-210ENST00000580713 RICTORQ6R327 1708 aa18.19■□□□□ 0.5
TOP3A-210ENST00000580713 YEATS2Q9ULM3 1422 aa18.19■□□□□ 0.5
TOP3A-210ENST00000580713 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
TOP3A-210ENST00000580713 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms