RNA–Protein interactions for RNA: ENST00000579638.5

PPP4R1-214, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-214ENST00000579638 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
PPP4R1-214ENST00000579638 POLA1P09884 1462 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-214ENST00000579638 TDRD9Q8NDG6 1382 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-214ENST00000579638 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
PPP4R1-214ENST00000579638 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-214ENST00000579638 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
PPP4R1-214ENST00000579638 SYNJ1O43426 1573 aa13□□□□□ -0.33
PPP4R1-214ENST00000579638 CHMP7Q8WUX9 453 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-214ENST00000579638 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
PPP4R1-214ENST00000579638 SOGA1O94964 1423 aa12.96□□□□□ -0.33
PPP4R1-214ENST00000579638 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
PPP4R1-214ENST00000579638 WDR97A6NE52 1622 aa12.91□□□□□ -0.34
PPP4R1-214ENST00000579638 APLP2Q06481 763 aa12.91□□□□□ -0.34
PPP4R1-214ENST00000579638 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
PPP4R1-214ENST00000579638 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-214ENST00000579638 KIF13AQ9H1H9 1805 aa12.89□□□□□ -0.35
PPP4R1-214ENST00000579638 GRIN2BQ13224 1484 aa12.89□□□□□ -0.35
PPP4R1-214ENST00000579638 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
PPP4R1-214ENST00000579638 ERCC6L2Q5T890 1561 aa12.88□□□□□ -0.35
PPP4R1-214ENST00000579638 PBRM1Q86U86 1689 aa12.84□□□□□ -0.35
PPP4R1-214ENST00000579638 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
PPP4R1-214ENST00000579638 CUX1P39880 1505 aa12.81□□□□□ -0.36
PPP4R1-214ENST00000579638 FKBP8Q14318 412 aa12.8□□□□□ -0.36
PPP4R1-214ENST00000579638 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
PPP4R1-214ENST00000579638 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
PPP4R1-214ENST00000579638 CEP170Q5SW79 1584 aa12.78□□□□□ -0.36
PPP4R1-214ENST00000579638 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
PPP4R1-214ENST00000579638 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
PPP4R1-214ENST00000579638 ABCA5Q8WWZ7 1642 aa12.73□□□□□ -0.37
PPP4R1-214ENST00000579638 GRIN2AQ12879 1464 aa12.73□□□□□ -0.37
PPP4R1-214ENST00000579638 NUP160Q12769 1436 aa12.71□□□□□ -0.37
PPP4R1-214ENST00000579638 FAM69CQ0P6D2 419 aa12.71□□□□□ -0.37
PPP4R1-214ENST00000579638 ABCA10Q8WWZ4 1543 aa12.7□□□□□ -0.38
PPP4R1-214ENST00000579638 ABCC10Q5T3U5 1492 aa12.68□□□□□ -0.38
PPP4R1-214ENST00000579638 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
PPP4R1-214ENST00000579638 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
PPP4R1-214ENST00000579638 KDM6BO15054 1643 aa12.66□□□□□ -0.38
PPP4R1-214ENST00000579638 TSPOAP1O95153 1857 aa12.65□□□□□ -0.38
PPP4R1-214ENST00000579638 DIP2BQ9P265 1576 aa12.65□□□□□ -0.38
PPP4R1-214ENST00000579638 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-214ENST00000579638 PRG4Q92954 1404 aaPredicted RBP12.63□□□□□ -0.39
PPP4R1-214ENST00000579638 MAPKBP1O60336 1514 aa12.62□□□□□ -0.39
PPP4R1-214ENST00000579638 CAPN15O75808 1086 aa12.61□□□□□ -0.39
PPP4R1-214ENST00000579638 JPH4Q96JJ6 628 aa12.6□□□□□ -0.39
PPP4R1-214ENST00000579638 FHAD1B1AJZ9 1412 aa12.6□□□□□ -0.39
PPP4R1-214ENST00000579638 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
PPP4R1-214ENST00000579638 ADCY10Q96PN6 1610 aa12.58□□□□□ -0.4
PPP4R1-214ENST00000579638 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
PPP4R1-214ENST00000579638 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
PPP4R1-214ENST00000579638 HECW2Q9P2P5 1572 aa12.53□□□□□ -0.4
PPP4R1-214ENST00000579638 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.4
PPP4R1-214ENST00000579638 POLA2Q14181 598 aa12.52□□□□□ -0.41
PPP4R1-214ENST00000579638 RUSC2Q8N2Y8 1516 aa12.5□□□□□ -0.41
PPP4R1-214ENST00000579638 PPRC1Q5VV67 1664 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-214ENST00000579638 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-214ENST00000579638 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
PPP4R1-214ENST00000579638 TOP2BQ02880 1626 aa12.46□□□□□ -0.41
PPP4R1-214ENST00000579638 COL17A1Q9UMD9 1497 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-214ENST00000579638 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
PPP4R1-214ENST00000579638 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
PPP4R1-214ENST00000579638 GLI2P10070 1586 aa12.4□□□□□ -0.42
PPP4R1-214ENST00000579638 ABCB7O75027 752 aa12.39□□□□□ -0.43
PPP4R1-214ENST00000579638 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
PPP4R1-214ENST00000579638 KIAA0586Q9BVV6 1533 aa12.38□□□□□ -0.43
PPP4R1-214ENST00000579638 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
PPP4R1-214ENST00000579638 PTPRGP23470 1445 aa12.37□□□□□ -0.43
PPP4R1-214ENST00000579638 PLB1Q6P1J6 1458 aa12.36□□□□□ -0.43
PPP4R1-214ENST00000579638 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
PPP4R1-214ENST00000579638 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
PPP4R1-214ENST00000579638 CUL7Q14999 1698 aa12.35□□□□□ -0.43
PPP4R1-214ENST00000579638 TTBK1Q5TCY1 1321 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-214ENST00000579638 MAP3K4Q9Y6R4 1608 aa12.33□□□□□ -0.43
PPP4R1-214ENST00000579638 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-214ENST00000579638 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-214ENST00000579638 EPRSP07814 1512 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-214ENST00000579638 TNIKQ9UKE5 1360 aa12.29□□□□□ -0.44
PPP4R1-214ENST00000579638 UHRF1BP1LA0JNW5 1464 aa12.28□□□□□ -0.44
PPP4R1-214ENST00000579638 TEX14Q8IWB6 1497 aa12.28□□□□□ -0.44
PPP4R1-214ENST00000579638 DSG3P32926 999 aa12.28□□□□□ -0.44
PPP4R1-214ENST00000579638 IGF1RP08069 1367 aa12.28□□□□□ -0.44
PPP4R1-214ENST00000579638 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
PPP4R1-214ENST00000579638 UACAQ9BZF9 1416 aa12.25□□□□□ -0.45
PPP4R1-214ENST00000579638 KDM5BQ9UGL1 1544 aa12.25□□□□□ -0.45
PPP4R1-214ENST00000579638 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
PPP4R1-214ENST00000579638 ZCCHC11Q5TAX3 1644 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-214ENST00000579638 LMTK3Q96Q04 1460 aa12.23□□□□□ -0.45
PPP4R1-214ENST00000579638 PROM2Q8N271 834 aa12.23□□□□□ -0.45
PPP4R1-214ENST00000579638 KIF21BO75037 1637 aa12.22□□□□□ -0.45
PPP4R1-214ENST00000579638 IQGAP2Q13576 1575 aa12.19□□□□□ -0.46
PPP4R1-214ENST00000579638 DISP1Q96F81 1524 aa12.19□□□□□ -0.46
PPP4R1-214ENST00000579638 KIF27Q86VH2 1401 aa12.18□□□□□ -0.46
PPP4R1-214ENST00000579638 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
PPP4R1-214ENST00000579638 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
PPP4R1-214ENST00000579638 PTPRMP28827 1452 aa12.16□□□□□ -0.46
PPP4R1-214ENST00000579638 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
PPP4R1-214ENST00000579638 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-214ENST00000579638 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
PPP4R1-214ENST00000579638 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
PPP4R1-214ENST00000579638 CD109Q6YHK3 1445 aa12.15□□□□□ -0.46
PPP4R1-214ENST00000579638 ILDR2Q71H61 639 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms