RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 FHOD3Q2V2M9 1422 aa26■■□□□ 1.75
ERBB2-205ENST00000578199 LRRC9Q6ZRR7 1453 aa25.95■■□□□ 1.75
ERBB2-205ENST00000578199 PCF11O94913 1555 aaKnown RBP25.94■■□□□ 1.74
ERBB2-205ENST00000578199 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
ERBB2-205ENST00000578199 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
ERBB2-205ENST00000578199 CUL7Q14999 1698 aa25.93■■□□□ 1.74
ERBB2-205ENST00000578199 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
ERBB2-205ENST00000578199 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
ERBB2-205ENST00000578199 PHLDB1Q86UU1 1377 aa25.91■■□□□ 1.74
ERBB2-205ENST00000578199 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
ERBB2-205ENST00000578199 PELP1Q8IZL8 1130 aaKnown RBP25.9■■□□□ 1.74
ERBB2-205ENST00000578199 NEUROD1Q13562 356 aa25.88■■□□□ 1.73
ERBB2-205ENST00000578199 CTTNBP2Q8WZ74 1663 aa25.87■■□□□ 1.73
ERBB2-205ENST00000578199 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
ERBB2-205ENST00000578199 CLSPNQ9HAW4 1339 aa25.86■■□□□ 1.73
ERBB2-205ENST00000578199 FAM50AQ14320 339 aaKnown RBP25.85■■□□□ 1.73
ERBB2-205ENST00000578199 ABCA5Q8WWZ7 1642 aa25.84■■□□□ 1.73
ERBB2-205ENST00000578199 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
ERBB2-205ENST00000578199 CFAP43Q8NDM7 1665 aa25.81■■□□□ 1.72
ERBB2-205ENST00000578199 EFCAB5A4FU69 1503 aa25.81■■□□□ 1.72
ERBB2-205ENST00000578199 RAB3GAP2Q9H2M9 1393 aa25.8■■□□□ 1.72
ERBB2-205ENST00000578199 MIER1Q8N108 512 aa25.8■■□□□ 1.72
ERBB2-205ENST00000578199 CASKIN1Q8WXD9 1431 aa25.78■■□□□ 1.72
ERBB2-205ENST00000578199 FYCO1Q9BQS8 1478 aa25.77■■□□□ 1.72
ERBB2-205ENST00000578199 YTHDC1Q96MU7 727 aaKnown RBP25.72■■□□□ 1.71
ERBB2-205ENST00000578199 TARBP1Q13395 1621 aaKnown RBP25.72■■□□□ 1.71
ERBB2-205ENST00000578199 FMN1Q68DA7 1419 aa25.7■■□□□ 1.7
ERBB2-205ENST00000578199 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.78e-7■■■■□ 19.9
ERBB2-205ENST00000578199 SETD5Q9C0A6 1442 aa25.69■■□□□ 1.7
ERBB2-205ENST00000578199 CENPBP07199 599 aaPredicted RBP25.69■■□□□ 1.7
ERBB2-205ENST00000578199 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
ERBB2-205ENST00000578199 SAMD9Q5K651 1589 aa25.64■■□□□ 1.69
ERBB2-205ENST00000578199 MAPKBP1O60336 1514 aa25.63■■□□□ 1.69
ERBB2-205ENST00000578199 LRRIQ1Q96JM4 1722 aa25.6■■□□□ 1.69
ERBB2-205ENST00000578199 MTUS2Q5JR59 1369 aa25.6■■□□□ 1.69
ERBB2-205ENST00000578199 GTF3C3Q9Y5Q9 886 aa25.57■■□□□ 1.68
ERBB2-205ENST00000578199 PBRM1Q86U86 1689 aa25.56■■□□□ 1.68
ERBB2-205ENST00000578199 SIN3AQ96ST3 1273 aa25.56■■□□□ 1.68
ERBB2-205ENST00000578199 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
ERBB2-205ENST00000578199 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
ERBB2-205ENST00000578199 FGD6Q6ZV73 1430 aa25.53■■□□□ 1.68
ERBB2-205ENST00000578199 ZNF608Q9ULD9 1512 aaPredicted RBP25.49■■□□□ 1.67
ERBB2-205ENST00000578199 ARID3CA6NKF2 412 aa25.47■■□□□ 1.67
ERBB2-205ENST00000578199 NCOA2Q15596 1464 aa25.46■■□□□ 1.67
ERBB2-205ENST00000578199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.46■■□□□ 1.67
ERBB2-205ENST00000578199 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
ERBB2-205ENST00000578199 PTPRKQ15262 1439 aa25.45■■□□□ 1.66
ERBB2-205ENST00000578199 IQGAP2Q13576 1575 aa25.42■■□□□ 1.66
ERBB2-205ENST00000578199 MAGI3Q5TCQ9 1506 aa25.42■■□□□ 1.66
ERBB2-205ENST00000578199 MYOM3Q5VTT5 1437 aa25.39■■□□□ 1.66
ERBB2-205ENST00000578199 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
ERBB2-205ENST00000578199 THOC2Q8NI27 1593 aaKnown RBP25.37■■□□□ 1.65
ERBB2-205ENST00000578199 IFT140Q96RY7 1462 aa25.36■■□□□ 1.65
ERBB2-205ENST00000578199 EHBP1L1Q8N3D4 1523 aa25.35■■□□□ 1.65
ERBB2-205ENST00000578199 WDR62O43379 1518 aa25.33■■□□□ 1.65
ERBB2-205ENST00000578199 CDK13Q14004 1512 aaKnown RBP25.32■■□□□ 1.64
ERBB2-205ENST00000578199 CCDC18Q5T9S5 1454 aa25.32■■□□□ 1.64
ERBB2-205ENST00000578199 UGGT2Q9NYU1 1516 aa25.31■■□□□ 1.64
ERBB2-205ENST00000578199 CHIC2Q9UKJ5 165 aa25.3■■□□□ 1.64
ERBB2-205ENST00000578199 EPRSP07814 1512 aaKnown RBP25.3■■□□□ 1.64
ERBB2-205ENST00000578199 HECW1Q76N89 1606 aa25.29■■□□□ 1.64
ERBB2-205ENST00000578199 HFM1A2PYH4 1435 aa25.29■■□□□ 1.64
ERBB2-205ENST00000578199 PTPN23Q9H3S7 1636 aa25.29■■□□□ 1.64
ERBB2-205ENST00000578199 RRP7BPQ9NSQ0 103 aa25.27■■□□□ 1.64
ERBB2-205ENST00000578199 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
ERBB2-205ENST00000578199 ARHGEF11O15085 1522 aa25.26■■□□□ 1.63
ERBB2-205ENST00000578199 NAIPQ13075 1403 aa25.26■■□□□ 1.63
ERBB2-205ENST00000578199 HIRIP3Q9BW71 556 aaPredicted RBP25.25■■□□□ 1.63
ERBB2-205ENST00000578199 EIF4G3O43432 1585 aaKnown RBP25.23■■□□□ 1.63
ERBB2-205ENST00000578199 PPP1R15AO75807 674 aaPredicted RBP25.22■■□□□ 1.63
ERBB2-205ENST00000578199 UACAQ9BZF9 1416 aa25.2■■□□□ 1.62
ERBB2-205ENST00000578199 KIAA0586Q9BVV6 1533 aa25.2■■□□□ 1.62
ERBB2-205ENST00000578199 DISP1Q96F81 1524 aa25.2■■□□□ 1.62
ERBB2-205ENST00000578199 FBLN2P98095 1184 aa25.19■■□□□ 1.62
ERBB2-205ENST00000578199 GRIN2AQ12879 1464 aa25.19■■□□□ 1.62
ERBB2-205ENST00000578199 TIMELESSQ9UNS1 1208 aa25.18■■□□□ 1.62
ERBB2-205ENST00000578199 DDX10Q13206 875 aaKnown RBP25.16■■□□□ 1.62
ERBB2-205ENST00000578199 KIAA0556O60303 1618 aa25.15■■□□□ 1.62
ERBB2-205ENST00000578199 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
ERBB2-205ENST00000578199 TONSLQ96HA7 1378 aa25.13■■□□□ 1.61
ERBB2-205ENST00000578199 TCOF1Q13428 1488 aaKnown RBP25.13■■□□□ 1.61
ERBB2-205ENST00000578199 KCNH8Q96L42 1107 aa25.13■■□□□ 1.61
ERBB2-205ENST00000578199 TRIM52Q96A61 297 aa25.1■■□□□ 1.61
ERBB2-205ENST00000578199 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
ERBB2-205ENST00000578199 KDM6BO15054 1643 aa25.08■■□□□ 1.61
ERBB2-205ENST00000578199 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
ERBB2-205ENST00000578199 MIA2Q96PC5 1412 aa25.06■■□□□ 1.6
ERBB2-205ENST00000578199 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
ERBB2-205ENST00000578199 RAPGEF6Q8TEU7 1601 aa25.04■■□□□ 1.6
ERBB2-205ENST00000578199 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
ERBB2-205ENST00000578199 SYNJ2O15056 1496 aa25.01■■□□□ 1.59
ERBB2-205ENST00000578199 DENND4BO75064 1496 aaPredicted RBP25.01■■□□□ 1.59
ERBB2-205ENST00000578199 GCC2Q8IWJ2 1684 aa25■■□□□ 1.59
ERBB2-205ENST00000578199 PLB1Q6P1J6 1458 aa25■■□□□ 1.59
ERBB2-205ENST00000578199 FOXD1Q16676 465 aa25■■□□□ 1.59
ERBB2-205ENST00000578199 MYT1Q01538 1121 aa24.99■■□□□ 1.59
ERBB2-205ENST00000578199 PRG4Q92954 1404 aaPredicted RBP24.98■■□□□ 1.59
ERBB2-205ENST00000578199 JPH4Q96JJ6 628 aa24.97■■□□□ 1.59
ERBB2-205ENST00000578199 CDK11AQ9UQ88 783 aaPredicted RBP24.97■■□□□ 1.59
ERBB2-205ENST00000578199 MPHOSPH9Q99550 1183 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms