RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 CLASP1Q7Z460 1538 aa25.78■■□□□ 1.72
IFT20-206ENST00000578122 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
IFT20-206ENST00000578122 NUP160Q12769 1436 aa25.75■■□□□ 1.71
IFT20-206ENST00000578122 EEA1Q15075 1411 aa25.71■■□□□ 1.71
IFT20-206ENST00000578122 RAPGEF2Q9Y4G8 1499 aa25.67■■□□□ 1.7
IFT20-206ENST00000578122 CSRNP3Q8WYN3 585 aa25.66■■□□□ 1.7
IFT20-206ENST00000578122 FAM9AQ8IZU1 332 aaPredicted RBP25.63■■□□□ 1.69
IFT20-206ENST00000578122 RIMBP3CA6NJZ7 1639 aa25.63■■□□□ 1.69
IFT20-206ENST00000578122 RIMBP3BA6NNM3 1639 aa25.63■■□□□ 1.69
IFT20-206ENST00000578122 RIMBP3Q9UFD9 1639 aa25.63■■□□□ 1.69
IFT20-206ENST00000578122 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
IFT20-206ENST00000578122 PRXQ9BXM0 1461 aa25.61■■□□□ 1.69
IFT20-206ENST00000578122 KIAA0586Q9BVV6 1533 aa25.57■■□□□ 1.68
IFT20-206ENST00000578122 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
IFT20-206ENST00000578122 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
IFT20-206ENST00000578122 IQGAP2Q13576 1575 aa25.45■■□□□ 1.66
IFT20-206ENST00000578122 ERCC6L2Q5T890 1561 aa25.45■■□□□ 1.66
IFT20-206ENST00000578122 CTTNBP2Q8WZ74 1663 aa25.45■■□□□ 1.66
IFT20-206ENST00000578122 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.66
IFT20-206ENST00000578122 KIF21BO75037 1637 aa25.44■■□□□ 1.66
IFT20-206ENST00000578122 ARAP1Q96P48 1450 aa25.43■■□□□ 1.66
IFT20-206ENST00000578122 CYB5RLQ6IPT4 315 aa25.4■■□□□ 1.66
IFT20-206ENST00000578122 UGGT2Q9NYU1 1516 aa25.32■■□□□ 1.64
IFT20-206ENST00000578122 CARMIL2Q6F5E8 1435 aa25.29■■□□□ 1.64
IFT20-206ENST00000578122 GOLGA3Q08378 1498 aa25.29■■□□□ 1.64
IFT20-206ENST00000578122 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
IFT20-206ENST00000578122 DISP1Q96F81 1524 aa25.25■■□□□ 1.63
IFT20-206ENST00000578122 UBTFP17480 764 aaKnown RBP25.24■■□□□ 1.63
IFT20-206ENST00000578122 KIAA0556O60303 1618 aa25.2■■□□□ 1.62
IFT20-206ENST00000578122 TNIKQ9UKE5 1360 aa25.19■■□□□ 1.62
IFT20-206ENST00000578122 PTPRGP23470 1445 aa25.17■■□□□ 1.62
IFT20-206ENST00000578122 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
IFT20-206ENST00000578122 RANGAP1P46060 587 aaPredicted RBP25.13■■□□□ 1.61
IFT20-206ENST00000578122 SAMD9Q5K651 1589 aa25.1■■□□□ 1.61
IFT20-206ENST00000578122 P3H3Q8IVL6 736 aa25.07■■□□□ 1.6
IFT20-206ENST00000578122 ADCY10Q96PN6 1610 aa25.04■■□□□ 1.6
IFT20-206ENST00000578122 EFCAB5A4FU69 1503 aa25.02■■□□□ 1.6
IFT20-206ENST00000578122 UACAQ9BZF9 1416 aa25■■□□□ 1.59
IFT20-206ENST00000578122 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
IFT20-206ENST00000578122 FHOD3Q2V2M9 1422 aa24.96■■□□□ 1.59
IFT20-206ENST00000578122 NPM1P06748 294 aaKnown RBP eCLIP24.96■■□□□ 1.59
IFT20-206ENST00000578122 ABCC2Q92887 1545 aa24.95■■□□□ 1.58
IFT20-206ENST00000578122 PLB1Q6P1J6 1458 aa24.94■■□□□ 1.58
IFT20-206ENST00000578122 ABCA8O94911 1581 aa24.93■■□□□ 1.58
IFT20-206ENST00000578122 LOC105371045A0A1W2PR82 267 aa24.93■■□□□ 1.58
IFT20-206ENST00000578122 ARHGAP35Q9NRY4 1499 aa24.93■■□□□ 1.58
IFT20-206ENST00000578122 CLIP1P30622 1438 aa24.85■■□□□ 1.57
IFT20-206ENST00000578122 RAPGEF6Q8TEU7 1601 aa24.84■■□□□ 1.57
IFT20-206ENST00000578122 KDM5BQ9UGL1 1544 aa24.84■■□□□ 1.57
IFT20-206ENST00000578122 MAPKBP1O60336 1514 aa24.82■■□□□ 1.56
IFT20-206ENST00000578122 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
IFT20-206ENST00000578122 ZCCHC11Q5TAX3 1644 aaKnown RBP24.82■■□□□ 1.56
IFT20-206ENST00000578122 FMN1Q68DA7 1419 aa24.78■■□□□ 1.56
IFT20-206ENST00000578122 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
IFT20-206ENST00000578122 ARID3CA6NKF2 412 aa24.74■■□□□ 1.55
IFT20-206ENST00000578122 ASXL2Q76L83 1435 aa24.74■■□□□ 1.55
IFT20-206ENST00000578122 NUP153P49790 1475 aaKnown RBP24.73■■□□□ 1.55
IFT20-206ENST00000578122 ATP10BO94823 1461 aa24.72■■□□□ 1.55
IFT20-206ENST00000578122 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.54
IFT20-206ENST00000578122 ABCC10Q5T3U5 1492 aa24.69■■□□□ 1.54
IFT20-206ENST00000578122 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
IFT20-206ENST00000578122 DIP2BQ9P265 1576 aa24.67■■□□□ 1.54
IFT20-206ENST00000578122 HECW1Q76N89 1606 aa24.66■■□□□ 1.54
IFT20-206ENST00000578122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
IFT20-206ENST00000578122 FAM69CQ0P6D2 419 aa24.65■■□□□ 1.54
IFT20-206ENST00000578122 HNRNPUL2Q1KMD3 747 aaKnown RBP24.65■■□□□ 1.54
IFT20-206ENST00000578122 WDR7Q9Y4E6 1490 aa24.64■■□□□ 1.53
IFT20-206ENST00000578122 PCF11O94913 1555 aaKnown RBP24.63■■□□□ 1.53
IFT20-206ENST00000578122 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
IFT20-206ENST00000578122 MAPK8IP2Q13387 824 aaPredicted RBP24.6■■□□□ 1.53
IFT20-206ENST00000578122 EPRSP07814 1512 aaKnown RBP24.59■■□□□ 1.53
IFT20-206ENST00000578122 CDK13Q14004 1512 aaKnown RBP24.59■■□□□ 1.53
IFT20-206ENST00000578122 GLI2P10070 1586 aa24.58■■□□□ 1.52
IFT20-206ENST00000578122 SCAF1Q9H7N4 1312 aaKnown RBP24.58■■□□□ 1.52
IFT20-206ENST00000578122 LRRIQ1Q96JM4 1722 aa24.57■■□□□ 1.52
IFT20-206ENST00000578122 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
IFT20-206ENST00000578122 KCNH8Q96L42 1107 aa24.56■■□□□ 1.52
IFT20-206ENST00000578122 PLEKHD1A6NEE1 506 aa24.54■■□□□ 1.52
IFT20-206ENST00000578122 TSPOAP1O95153 1857 aa24.51■■□□□ 1.51
IFT20-206ENST00000578122 CCDC18Q5T9S5 1454 aa24.5■■□□□ 1.51
IFT20-206ENST00000578122 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
IFT20-206ENST00000578122 MAP3K4Q9Y6R4 1608 aa24.46■■□□□ 1.51
IFT20-206ENST00000578122 VPS8Q8N3P4 1428 aa24.46■■□□□ 1.51
IFT20-206ENST00000578122 CFAP43Q8NDM7 1665 aa24.44■■□□□ 1.5
IFT20-206ENST00000578122 DMRT2Q9Y5R5 561 aa24.41■■□□□ 1.5
IFT20-206ENST00000578122 ABCA9Q8IUA7 1624 aa24.41■■□□□ 1.5
IFT20-206ENST00000578122 PPRC1Q5VV67 1664 aaKnown RBP24.4■■□□□ 1.5
IFT20-206ENST00000578122 CD109Q6YHK3 1445 aa24.4■■□□□ 1.5
IFT20-206ENST00000578122 TROQ12816 1431 aaPredicted RBP24.39■■□□□ 1.5
IFT20-206ENST00000578122 MAGI3Q5TCQ9 1506 aa24.35■■□□□ 1.49
IFT20-206ENST00000578122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.35■■□□□ 1.49
IFT20-206ENST00000578122 TEX14Q8IWB6 1497 aa24.34■■□□□ 1.49
IFT20-206ENST00000578122 KIF14Q15058 1648 aa24.33■■□□□ 1.49
IFT20-206ENST00000578122 TTC37Q6PGP7 1564 aa24.31■■□□□ 1.48
IFT20-206ENST00000578122 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
IFT20-206ENST00000578122 MTUS2Q5JR59 1369 aa24.28■■□□□ 1.48
IFT20-206ENST00000578122 MAP3K1Q13233 1512 aa24.24■■□□□ 1.47
IFT20-206ENST00000578122 MYO5CQ9NQX4 1742 aa24.24■■□□□ 1.47
IFT20-206ENST00000578122 EHBP1L1Q8N3D4 1523 aa24.23■■□□□ 1.47
IFT20-206ENST00000578122 KDM6BO15054 1643 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms