RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
SKA2-203ENST00000578105 SOGA1O94964 1423 aa13□□□□□ -0.33
SKA2-203ENST00000578105 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
SKA2-203ENST00000578105 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
SKA2-203ENST00000578105 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
SKA2-203ENST00000578105 CADPSQ9ULU8 1353 aa12.92□□□□□ -0.34
SKA2-203ENST00000578105 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
SKA2-203ENST00000578105 RUSC2Q8N2Y8 1516 aa12.89□□□□□ -0.35
SKA2-203ENST00000578105 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
SKA2-203ENST00000578105 CUX1P39880 1505 aa12.87□□□□□ -0.35
SKA2-203ENST00000578105 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
SKA2-203ENST00000578105 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
SKA2-203ENST00000578105 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
SKA2-203ENST00000578105 PRXQ9BXM0 1461 aa12.83□□□□□ -0.36
SKA2-203ENST00000578105 LAMC3Q9Y6N6 1575 aa12.78□□□□□ -0.36
SKA2-203ENST00000578105 CLIP1P30622 1438 aa12.78□□□□□ -0.36
SKA2-203ENST00000578105 POTEMA6NI47 508 aa12.77□□□□□ -0.37
SKA2-203ENST00000578105 RAPGEF2Q9Y4G8 1499 aa12.76□□□□□ -0.37
SKA2-203ENST00000578105 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
SKA2-203ENST00000578105 VPS8Q8N3P4 1428 aa12.75□□□□□ -0.37
SKA2-203ENST00000578105 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
SKA2-203ENST00000578105 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
SKA2-203ENST00000578105 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
SKA2-203ENST00000578105 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
SKA2-203ENST00000578105 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
SKA2-203ENST00000578105 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
SKA2-203ENST00000578105 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
SKA2-203ENST00000578105 CUX2O14529 1486 aa12.66□□□□□ -0.38
SKA2-203ENST00000578105 PDS5BQ9NTI5 1447 aa12.66□□□□□ -0.38
SKA2-203ENST00000578105 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
SKA2-203ENST00000578105 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
SKA2-203ENST00000578105 IGF1RP08069 1367 aa12.64□□□□□ -0.39
SKA2-203ENST00000578105 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
SKA2-203ENST00000578105 CUL7Q14999 1698 aa12.62□□□□□ -0.39
SKA2-203ENST00000578105 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
SKA2-203ENST00000578105 CARMIL1Q5VZK9 1371 aa12.59□□□□□ -0.39
SKA2-203ENST00000578105 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
SKA2-203ENST00000578105 MAP3K1Q13233 1512 aa12.58□□□□□ -0.4
SKA2-203ENST00000578105 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
SKA2-203ENST00000578105 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
SKA2-203ENST00000578105 NESP48681 1621 aa12.54□□□□□ -0.4
SKA2-203ENST00000578105 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
SKA2-203ENST00000578105 EFCAB5A4FU69 1503 aa12.53□□□□□ -0.4
SKA2-203ENST00000578105 OTUD5Q96G74 571 aa12.53□□□□□ -0.4
SKA2-203ENST00000578105 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.4
SKA2-203ENST00000578105 FHAD1B1AJZ9 1412 aa12.52□□□□□ -0.41
SKA2-203ENST00000578105 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
SKA2-203ENST00000578105 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
SKA2-203ENST00000578105 CTTNBP2Q8WZ74 1663 aa12.48□□□□□ -0.41
SKA2-203ENST00000578105 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
SKA2-203ENST00000578105 CCER1Q8TC90 406 aaPredicted RBP12.47□□□□□ -0.41
SKA2-203ENST00000578105 AQRO60306 1485 aaKnown RBP eCLIP12.46□□□□□ -0.41
SKA2-203ENST00000578105 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
SKA2-203ENST00000578105 GAPVD1Q14C86 1478 aa12.44□□□□□ -0.42
SKA2-203ENST00000578105 MRC2Q9UBG0 1479 aa12.44□□□□□ -0.42
SKA2-203ENST00000578105 RRBP1Q9P2E9 1410 aaKnown RBP12.44□□□□□ -0.42
SKA2-203ENST00000578105 TARBP1Q13395 1621 aaKnown RBP12.43□□□□□ -0.42
SKA2-203ENST00000578105 CLSPNQ9HAW4 1339 aa12.42□□□□□ -0.42
SKA2-203ENST00000578105 TIAM1Q13009 1591 aa12.42□□□□□ -0.42
SKA2-203ENST00000578105 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
SKA2-203ENST00000578105 FMN1Q68DA7 1419 aa12.4□□□□□ -0.42
SKA2-203ENST00000578105 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
SKA2-203ENST00000578105 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
SKA2-203ENST00000578105 WDR62O43379 1518 aa12.37□□□□□ -0.43
SKA2-203ENST00000578105 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
SKA2-203ENST00000578105 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
SKA2-203ENST00000578105 THOC2Q8NI27 1593 aaKnown RBP12.37□□□□□ -0.43
SKA2-203ENST00000578105 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
SKA2-203ENST00000578105 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
SKA2-203ENST00000578105 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
SKA2-203ENST00000578105 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
SKA2-203ENST00000578105 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
SKA2-203ENST00000578105 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
SKA2-203ENST00000578105 CCNB3Q8WWL7 1395 aa12.33□□□□□ -0.44
SKA2-203ENST00000578105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.444e-8■■■■■ 44
SKA2-203ENST00000578105 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
SKA2-203ENST00000578105 TTBK1Q5TCY1 1321 aaPredicted RBP12.33□□□□□ -0.44
SKA2-203ENST00000578105 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
SKA2-203ENST00000578105 PCF11O94913 1555 aaKnown RBP12.32□□□□□ -0.44
SKA2-203ENST00000578105 ADAMTS12P58397 1594 aa12.31□□□□□ -0.44
SKA2-203ENST00000578105 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
SKA2-203ENST00000578105 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
SKA2-203ENST00000578105 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
SKA2-203ENST00000578105 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
SKA2-203ENST00000578105 FHOD3Q2V2M9 1422 aa12.27□□□□□ -0.45
SKA2-203ENST00000578105 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.45
SKA2-203ENST00000578105 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.45
SKA2-203ENST00000578105 CLCN6P51797 869 aa12.26□□□□□ -0.45
SKA2-203ENST00000578105 IQGAP2Q13576 1575 aa12.26□□□□□ -0.45
SKA2-203ENST00000578105 UGGT2Q9NYU1 1516 aa12.24□□□□□ -0.45
SKA2-203ENST00000578105 ATF5Q9Y2D1 282 aaPredicted RBP12.23□□□□□ -0.45
SKA2-203ENST00000578105 MAGI1Q96QZ7 1491 aaPredicted RBP12.22□□□□□ -0.45
SKA2-203ENST00000578105 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
SKA2-203ENST00000578105 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.45
SKA2-203ENST00000578105 ERCC6Q03468 1493 aa12.21□□□□□ -0.45
SKA2-203ENST00000578105 HECW1Q76N89 1606 aa12.21□□□□□ -0.46
SKA2-203ENST00000578105 KIAA0586Q9BVV6 1533 aa12.21□□□□□ -0.46
SKA2-203ENST00000578105 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
SKA2-203ENST00000578105 SUPT6HQ7KZ85 1726 aaKnown RBP12.18□□□□□ -0.46
SKA2-203ENST00000578105 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms