RNA–Protein interactions for RNA: ENST00000576924.5

SRRM2-230, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 3,314 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-230ENST00000576924 CUX1P39880 1505 aa23.79■■□□□ 1.4
SRRM2-230ENST00000576924 ANP32CO43423 234 aa23.79■■□□□ 1.4
SRRM2-230ENST00000576924 FHOD3Q2V2M9 1422 aa23.79■■□□□ 1.4
SRRM2-230ENST00000576924 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
SRRM2-230ENST00000576924 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
SRRM2-230ENST00000576924 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
SRRM2-230ENST00000576924 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
SRRM2-230ENST00000576924 FOXD1Q16676 465 aa23.74■■□□□ 1.39
SRRM2-230ENST00000576924 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
SRRM2-230ENST00000576924 TONSLQ96HA7 1378 aa23.72■■□□□ 1.39
SRRM2-230ENST00000576924 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
SRRM2-230ENST00000576924 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
SRRM2-230ENST00000576924 PHLDB1Q86UU1 1377 aa23.7■■□□□ 1.38
SRRM2-230ENST00000576924 ZNF777Q9ULD5 760 aaPredicted RBP23.7■■□□□ 1.38
SRRM2-230ENST00000576924 CADPSQ9ULU8 1353 aa23.69■■□□□ 1.38
SRRM2-230ENST00000576924 SETD5Q9C0A6 1442 aa23.64■■□□□ 1.38
SRRM2-230ENST00000576924 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
SRRM2-230ENST00000576924 FGD5Q6ZNL6 1462 aa23.63■■□□□ 1.37
SRRM2-230ENST00000576924 CLSPNQ9HAW4 1339 aa23.63■■□□□ 1.37
SRRM2-230ENST00000576924 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
SRRM2-230ENST00000576924 PEG3Q9GZU2 1588 aa23.59■■□□□ 1.37
SRRM2-230ENST00000576924 NESP48681 1621 aa23.58■■□□□ 1.37
SRRM2-230ENST00000576924 FAM9BQ8IZU0 186 aa23.58■■□□□ 1.36
SRRM2-230ENST00000576924 CFTRP13569 1480 aa23.56■■□□□ 1.36
SRRM2-230ENST00000576924 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
SRRM2-230ENST00000576924 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
SRRM2-230ENST00000576924 RRBP1Q9P2E9 1410 aaKnown RBP23.48■■□□□ 1.35
SRRM2-230ENST00000576924 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
SRRM2-230ENST00000576924 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
SRRM2-230ENST00000576924 LRRC9Q6ZRR7 1453 aa23.41■■□□□ 1.34
SRRM2-230ENST00000576924 TSHZ2Q9NRE2 1034 aa23.39■■□□□ 1.34
SRRM2-230ENST00000576924 SALL2Q9Y467 1007 aaPredicted RBP23.38■■□□□ 1.33
SRRM2-230ENST00000576924 KDM2AQ9Y2K7 1162 aa23.35■■□□□ 1.33
SRRM2-230ENST00000576924 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
SRRM2-230ENST00000576924 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
SRRM2-230ENST00000576924 HSPA5P11021 654 aaKnown RBP23.34■■□□□ 1.33
SRRM2-230ENST00000576924 ERICH6Q7L0X2 663 aa23.31■■□□□ 1.32
SRRM2-230ENST00000576924 BIVM-ERCC5R4GMW8 1640 aa23.31■■□□□ 1.32
SRRM2-230ENST00000576924 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
SRRM2-230ENST00000576924 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
SRRM2-230ENST00000576924 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
SRRM2-230ENST00000576924 EIF4G2P78344 907 aaKnown RBP eCLIP23.28■■□□□ 1.32
SRRM2-230ENST00000576924 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
SRRM2-230ENST00000576924 TIAM1Q13009 1591 aa23.25■■□□□ 1.31
SRRM2-230ENST00000576924 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
SRRM2-230ENST00000576924 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
SRRM2-230ENST00000576924 MPHOSPH9Q99550 1183 aa23.21■■□□□ 1.31
SRRM2-230ENST00000576924 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
SRRM2-230ENST00000576924 CHMP7Q8WUX9 453 aaPredicted RBP23.2■■□□□ 1.3
SRRM2-230ENST00000576924 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
SRRM2-230ENST00000576924 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
SRRM2-230ENST00000576924 PCF11O94913 1555 aaKnown RBP23.17■■□□□ 1.3
SRRM2-230ENST00000576924 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
SRRM2-230ENST00000576924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.17■■□□□ 1.33e-9■■□□□ 12.8
SRRM2-230ENST00000576924 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
SRRM2-230ENST00000576924 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.36e-9■■■■□ 24.4
SRRM2-230ENST00000576924 TOPBP1Q92547 1522 aa23.14■■□□□ 1.29
SRRM2-230ENST00000576924 CFDP1Q9UEE9 299 aaPredicted RBP23.13■■□□□ 1.29
SRRM2-230ENST00000576924 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
SRRM2-230ENST00000576924 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
SRRM2-230ENST00000576924 B4GALNT3Q6L9W6 998 aa23.12■■□□□ 1.29
SRRM2-230ENST00000576924 CDK11AQ9UQ88 783 aaPredicted RBP23.11■■□□□ 1.29
SRRM2-230ENST00000576924 PTPRKQ15262 1439 aa23.11■■□□□ 1.29
SRRM2-230ENST00000576924 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
SRRM2-230ENST00000576924 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
SRRM2-230ENST00000576924 GAPVD1Q14C86 1478 aa23.08■■□□□ 1.29
SRRM2-230ENST00000576924 MYT1Q01538 1121 aa23.08■■□□□ 1.28
SRRM2-230ENST00000576924 WASHC2AQ641Q2 1341 aa23.06■■□□□ 1.28
SRRM2-230ENST00000576924 CASKIN1Q8WXD9 1431 aa23.06■■□□□ 1.28
SRRM2-230ENST00000576924 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
SRRM2-230ENST00000576924 TIMELESSQ9UNS1 1208 aa23.05■■□□□ 1.28
SRRM2-230ENST00000576924 C11orf95C9JLR9 678 aaPredicted RBP23.05■■□□□ 1.28
SRRM2-230ENST00000576924 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
SRRM2-230ENST00000576924 PKD2Q13563 968 aa22.99■■□□□ 1.27
SRRM2-230ENST00000576924 NBPF8Q3BBV2 869 aa22.99■■□□□ 1.27
SRRM2-230ENST00000576924 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
SRRM2-230ENST00000576924 MYOM3Q5VTT5 1437 aa22.97■■□□□ 1.27
SRRM2-230ENST00000576924 TMC1Q8TDI8 760 aa22.95■■□□□ 1.26
SRRM2-230ENST00000576924 ANP32EQ9BTT0 268 aa22.94■■□□□ 1.26
SRRM2-230ENST00000576924 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
SRRM2-230ENST00000576924 NAIPQ13075 1403 aa22.94■■□□□ 1.26
SRRM2-230ENST00000576924 UACAQ9BZF9 1416 aa22.94■■□□□ 1.26
SRRM2-230ENST00000576924 URB2Q14146 1524 aaKnown RBP22.93■■□□□ 1.26
SRRM2-230ENST00000576924 CDK13Q14004 1512 aaKnown RBP22.91■■□□□ 1.26
SRRM2-230ENST00000576924 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
SRRM2-230ENST00000576924 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
SRRM2-230ENST00000576924 CARD11Q9BXL7 1154 aa22.91■■□□□ 1.26
SRRM2-230ENST00000576924 DCAF11Q8TEB1 546 aa22.9■■□□□ 1.26
SRRM2-230ENST00000576924 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
SRRM2-230ENST00000576924 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.26
SRRM2-230ENST00000576924 HNRNPMP52272 730 aaKnown RBP eCLIP22.89■■□□□ 1.258e-9■■■■■ 32.4
SRRM2-230ENST00000576924 NPM2Q86SE8 214 aaKnown RBP22.89■■□□□ 1.25
SRRM2-230ENST00000576924 PRKRIP1Q9H875 184 aaPredicted RBP22.88■■□□□ 1.25
SRRM2-230ENST00000576924 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
SRRM2-230ENST00000576924 HFM1A2PYH4 1435 aa22.85■■□□□ 1.25
SRRM2-230ENST00000576924 NBR1Q14596 966 aa22.83■■□□□ 1.25
SRRM2-230ENST00000576924 CCDC136Q96JN2 1154 aa22.82■■□□□ 1.24
SRRM2-230ENST00000576924 KIF7Q2M1P5 1343 aa22.8■■□□□ 1.24
SRRM2-230ENST00000576924 CC2D1BQ5T0F9 858 aaKnown RBP22.78■■□□□ 1.24
SRRM2-230ENST00000576924 JPH4Q96JJ6 628 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms