RNA–Protein interactions for RNA: ENST00000576894.5

SRRM2-229, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,210 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-229ENST00000576894 LRRC9Q6ZRR7 1453 aa30.54■■■□□ 2.48
SRRM2-229ENST00000576894 URB2Q14146 1524 aaKnown RBP30.5■■■□□ 2.47
SRRM2-229ENST00000576894 EFCAB5A4FU69 1503 aa30.49■■■□□ 2.47
SRRM2-229ENST00000576894 WDR97A6NE52 1622 aa30.48■■■□□ 2.47
SRRM2-229ENST00000576894 NEUROD1Q13562 356 aa30.47■■■□□ 2.47
SRRM2-229ENST00000576894 PELP1Q8IZL8 1130 aaKnown RBP30.47■■■□□ 2.47
SRRM2-229ENST00000576894 CFAP43Q8NDM7 1665 aa30.47■■■□□ 2.47
SRRM2-229ENST00000576894 PCF11O94913 1555 aaKnown RBP30.46■■■□□ 2.47
SRRM2-229ENST00000576894 CENPBP07199 599 aaPredicted RBP30.45■■■□□ 2.47
SRRM2-229ENST00000576894 P3H3Q8IVL6 736 aa30.42■■■□□ 2.46
SRRM2-229ENST00000576894 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.466e-9■■■■□ 24.4
SRRM2-229ENST00000576894 CTTNBP2Q8WZ74 1663 aa30.4■■■□□ 2.46
SRRM2-229ENST00000576894 FYCO1Q9BQS8 1478 aa30.39■■■□□ 2.46
SRRM2-229ENST00000576894 PDS5BQ9NTI5 1447 aa30.39■■■□□ 2.46
SRRM2-229ENST00000576894 FHOD3Q2V2M9 1422 aa30.38■■■□□ 2.45
SRRM2-229ENST00000576894 PHLDB1Q86UU1 1377 aa30.38■■■□□ 2.45
SRRM2-229ENST00000576894 CASKIN1Q8WXD9 1431 aa30.37■■■□□ 2.45
SRRM2-229ENST00000576894 ABCA5Q8WWZ7 1642 aa30.37■■■□□ 2.45
SRRM2-229ENST00000576894 RAB3GAP2Q9H2M9 1393 aa30.31■■■□□ 2.44
SRRM2-229ENST00000576894 ITGAEP38570 1179 aa30.31■■■□□ 2.44
SRRM2-229ENST00000576894 MIER1Q8N108 512 aa30.29■■■□□ 2.44
SRRM2-229ENST00000576894 GAPVD1Q14C86 1478 aa30.28■■■□□ 2.44
SRRM2-229ENST00000576894 TDRD9Q8NDG6 1382 aaKnown RBP30.27■■■□□ 2.44
SRRM2-229ENST00000576894 FMN1Q68DA7 1419 aa30.26■■■□□ 2.43
SRRM2-229ENST00000576894 SETD5Q9C0A6 1442 aa30.26■■■□□ 2.43
SRRM2-229ENST00000576894 ATP1B4Q9UN42 357 aaPredicted RBP30.24■■■□□ 2.43
SRRM2-229ENST00000576894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.21■■■□□ 2.435e-15■■■□□ 16.5
SRRM2-229ENST00000576894 SNAPC4Q5SXM2 1469 aa30.21■■■□□ 2.43
SRRM2-229ENST00000576894 SAMD9Q5K651 1589 aa30.2■■■□□ 2.43
SRRM2-229ENST00000576894 KIF21AQ7Z4S6 1674 aa30.2■■■□□ 2.42
SRRM2-229ENST00000576894 MAPKBP1O60336 1514 aa30.19■■■□□ 2.42
SRRM2-229ENST00000576894 TARBP1Q13395 1621 aaKnown RBP30.16■■■□□ 2.42
SRRM2-229ENST00000576894 FAM50AQ14320 339 aaKnown RBP30.15■■■□□ 2.42
SRRM2-229ENST00000576894 GTF3C3Q9Y5Q9 886 aa30.11■■■□□ 2.41
SRRM2-229ENST00000576894 GRIN2BQ13224 1484 aa30.05■■■□□ 2.4
SRRM2-229ENST00000576894 THOC2Q8NI27 1593 aaKnown RBP30.05■■■□□ 2.4
SRRM2-229ENST00000576894 FGD6Q6ZV73 1430 aa30.03■■■□□ 2.4
SRRM2-229ENST00000576894 YTHDC1Q96MU7 727 aaKnown RBP30■■■□□ 2.39
SRRM2-229ENST00000576894 MTUS2Q5JR59 1369 aa29.99■■■□□ 2.39
SRRM2-229ENST00000576894 LRRIQ1Q96JM4 1722 aa29.98■■■□□ 2.39
SRRM2-229ENST00000576894 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
SRRM2-229ENST00000576894 MRC2Q9UBG0 1479 aa29.94■■■□□ 2.38
SRRM2-229ENST00000576894 TIMELESSQ9UNS1 1208 aa29.9■■■□□ 2.38
SRRM2-229ENST00000576894 NCOA2Q15596 1464 aa29.9■■■□□ 2.38
SRRM2-229ENST00000576894 EHBP1L1Q8N3D4 1523 aa29.9■■■□□ 2.38
SRRM2-229ENST00000576894 ADAMTS12P58397 1594 aa29.89■■■□□ 2.38
SRRM2-229ENST00000576894 MYOM3Q5VTT5 1437 aa29.88■■■□□ 2.37
SRRM2-229ENST00000576894 SUPT6HQ7KZ85 1726 aaKnown RBP29.86■■■□□ 2.37
SRRM2-229ENST00000576894 CCDC18Q5T9S5 1454 aa29.84■■■□□ 2.37
SRRM2-229ENST00000576894 SIN3AQ96ST3 1273 aa29.84■■■□□ 2.37
SRRM2-229ENST00000576894 IQGAP2Q13576 1575 aa29.84■■■□□ 2.37
SRRM2-229ENST00000576894 ARHGEF11O15085 1522 aa29.83■■■□□ 2.37
SRRM2-229ENST00000576894 HFM1A2PYH4 1435 aa29.83■■■□□ 2.37
SRRM2-229ENST00000576894 PTPRKQ15262 1439 aa29.82■■■□□ 2.36
SRRM2-229ENST00000576894 UGGT2Q9NYU1 1516 aa29.81■■■□□ 2.36
SRRM2-229ENST00000576894 MAGI3Q5TCQ9 1506 aa29.78■■■□□ 2.36
SRRM2-229ENST00000576894 HECW1Q76N89 1606 aa29.77■■■□□ 2.36
SRRM2-229ENST00000576894 PTPN23Q9H3S7 1636 aa29.76■■■□□ 2.35
SRRM2-229ENST00000576894 IFT140Q96RY7 1462 aa29.76■■■□□ 2.35
SRRM2-229ENST00000576894 UACAQ9BZF9 1416 aa29.73■■■□□ 2.35
SRRM2-229ENST00000576894 WDR62O43379 1518 aa29.72■■■□□ 2.35
SRRM2-229ENST00000576894 NAIPQ13075 1403 aa29.72■■■□□ 2.35
SRRM2-229ENST00000576894 TCOF1Q13428 1488 aaKnown RBP29.7■■■□□ 2.35
SRRM2-229ENST00000576894 EPRSP07814 1512 aaKnown RBP29.69■■■□□ 2.34
SRRM2-229ENST00000576894 PPP1R15AO75807 674 aaPredicted RBP29.68■■■□□ 2.34
SRRM2-229ENST00000576894 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
SRRM2-229ENST00000576894 KIAA0586Q9BVV6 1533 aa29.6■■■□□ 2.33
SRRM2-229ENST00000576894 MIA2Q96PC5 1412 aa29.59■■■□□ 2.33
SRRM2-229ENST00000576894 CDK13Q14004 1512 aaKnown RBP29.57■■■□□ 2.32
SRRM2-229ENST00000576894 AKNAQ7Z591 1439 aa29.56■■■□□ 2.32
SRRM2-229ENST00000576894 ARID3CA6NKF2 412 aa29.54■■■□□ 2.32
SRRM2-229ENST00000576894 DISP1Q96F81 1524 aa29.54■■■□□ 2.32
SRRM2-229ENST00000576894 TONSLQ96HA7 1378 aa29.53■■■□□ 2.32
SRRM2-229ENST00000576894 KIAA0556O60303 1618 aa29.53■■■□□ 2.32
SRRM2-229ENST00000576894 GCC2Q8IWJ2 1684 aa29.52■■■□□ 2.32
SRRM2-229ENST00000576894 GRIN2AQ12879 1464 aa29.5■■■□□ 2.31
SRRM2-229ENST00000576894 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
SRRM2-229ENST00000576894 DDX10Q13206 875 aaKnown RBP29.44■■■□□ 2.3
SRRM2-229ENST00000576894 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
SRRM2-229ENST00000576894 NUP153P49790 1475 aaKnown RBP29.42■■■□□ 2.3
SRRM2-229ENST00000576894 KDM5BQ9UGL1 1544 aa29.41■■■□□ 2.3
SRRM2-229ENST00000576894 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
SRRM2-229ENST00000576894 CHIC2Q9UKJ5 165 aa29.4■■■□□ 2.3
SRRM2-229ENST00000576894 RAPGEF6Q8TEU7 1601 aa29.39■■■□□ 2.3
SRRM2-229ENST00000576894 DENND4BO75064 1496 aaPredicted RBP29.38■■■□□ 2.29
SRRM2-229ENST00000576894 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
SRRM2-229ENST00000576894 KDM6BO15054 1643 aa29.36■■■□□ 2.29
SRRM2-229ENST00000576894 ROCK1Q13464 1354 aa29.34■■■□□ 2.29
SRRM2-229ENST00000576894 KCNH8Q96L42 1107 aa29.33■■■□□ 2.29
SRRM2-229ENST00000576894 SYNJ2O15056 1496 aa29.31■■■□□ 2.28
SRRM2-229ENST00000576894 DAPK1P53355 1430 aa29.31■■■□□ 2.28
SRRM2-229ENST00000576894 HIRIP3Q9BW71 556 aaPredicted RBP29.3■■■□□ 2.28
SRRM2-229ENST00000576894 CDK11AQ9UQ88 783 aaPredicted RBP29.29■■■□□ 2.28
SRRM2-229ENST00000576894 CEP170Q5SW79 1584 aa29.29■■■□□ 2.28
SRRM2-229ENST00000576894 DNMT1P26358 1616 aaKnown RBP29.28■■■□□ 2.28
SRRM2-229ENST00000576894 ABCC5O15440 1437 aa29.27■■■□□ 2.28
SRRM2-229ENST00000576894 TRIM52Q96A61 297 aa29.27■■■□□ 2.28
SRRM2-229ENST00000576894 MPHOSPH9Q99550 1183 aa29.25■■■□□ 2.27
SRRM2-229ENST00000576894 CCER2I3L3R5 266 aa29.24■■■□□ 2.27
SRRM2-229ENST00000576894 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms