RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
HCFC1R1-206ENST00000574151 NUP160Q12769 1436 aa18.21■□□□□ 0.51
HCFC1R1-206ENST00000574151 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
HCFC1R1-206ENST00000574151 ABCA5Q8WWZ7 1642 aa18.19■□□□□ 0.5
HCFC1R1-206ENST00000574151 ADCY10Q96PN6 1610 aa18.13■□□□□ 0.49
HCFC1R1-206ENST00000574151 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
HCFC1R1-206ENST00000574151 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
HCFC1R1-206ENST00000574151 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
HCFC1R1-206ENST00000574151 ILDR2Q71H61 639 aa18.08■□□□□ 0.48
HCFC1R1-206ENST00000574151 SOCS7O14512 581 aa18.07■□□□□ 0.48
HCFC1R1-206ENST00000574151 PPRC1Q5VV67 1664 aaKnown RBP18.04■□□□□ 0.48
HCFC1R1-206ENST00000574151 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
HCFC1R1-206ENST00000574151 COL17A1Q9UMD9 1497 aaPredicted RBP17.99■□□□□ 0.47
HCFC1R1-206ENST00000574151 DISP3Q9P2K9 1392 aa17.96■□□□□ 0.47
HCFC1R1-206ENST00000574151 TOP2BQ02880 1626 aa17.93■□□□□ 0.46
HCFC1R1-206ENST00000574151 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
HCFC1R1-206ENST00000574151 RUSC2Q8N2Y8 1516 aa17.89■□□□□ 0.45
HCFC1R1-206ENST00000574151 GLI2P10070 1586 aa17.86■□□□□ 0.45
HCFC1R1-206ENST00000574151 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
HCFC1R1-206ENST00000574151 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
HCFC1R1-206ENST00000574151 ASXL2Q76L83 1435 aa17.85■□□□□ 0.45
HCFC1R1-206ENST00000574151 CUL7Q14999 1698 aa17.82■□□□□ 0.44
HCFC1R1-206ENST00000574151 PLB1Q6P1J6 1458 aa17.8■□□□□ 0.44
HCFC1R1-206ENST00000574151 MAP3K4Q9Y6R4 1608 aa17.78■□□□□ 0.44
HCFC1R1-206ENST00000574151 PTPRGP23470 1445 aa17.77■□□□□ 0.44
HCFC1R1-206ENST00000574151 ABCC2Q92887 1545 aa17.77■□□□□ 0.43
HCFC1R1-206ENST00000574151 KIF21BO75037 1637 aa17.76■□□□□ 0.43
HCFC1R1-206ENST00000574151 TEX14Q8IWB6 1497 aa17.76■□□□□ 0.43
HCFC1R1-206ENST00000574151 CERKQ8TCT0 537 aa17.73■□□□□ 0.43
HCFC1R1-206ENST00000574151 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
HCFC1R1-206ENST00000574151 PTPRMP28827 1452 aa17.69■□□□□ 0.42
HCFC1R1-206ENST00000574151 KIAA0586Q9BVV6 1533 aa17.68■□□□□ 0.42
HCFC1R1-206ENST00000574151 BIVM-ERCC5R4GMW8 1640 aa17.68■□□□□ 0.42
HCFC1R1-206ENST00000574151 SPATA31D1Q6ZQQ2 1576 aa17.66■□□□□ 0.42
HCFC1R1-206ENST00000574151 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
HCFC1R1-206ENST00000574151 HSPA2P54652 639 aa17.63■□□□□ 0.41
HCFC1R1-206ENST00000574151 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
HCFC1R1-206ENST00000574151 ADAMTSL3P82987 1691 aa17.61■□□□□ 0.41
HCFC1R1-206ENST00000574151 ZCCHC11Q5TAX3 1644 aaKnown RBP17.58■□□□□ 0.41
HCFC1R1-206ENST00000574151 UACAQ9BZF9 1416 aa17.58■□□□□ 0.41
HCFC1R1-206ENST00000574151 UHRF1BP1LA0JNW5 1464 aa17.57■□□□□ 0.4
HCFC1R1-206ENST00000574151 CARMIL2Q6F5E8 1435 aa17.56■□□□□ 0.4
HCFC1R1-206ENST00000574151 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
HCFC1R1-206ENST00000574151 KDM5BQ9UGL1 1544 aa17.53■□□□□ 0.4
HCFC1R1-206ENST00000574151 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
HCFC1R1-206ENST00000574151 MADDQ8WXG6 1647 aa17.52■□□□□ 0.4
HCFC1R1-206ENST00000574151 CD109Q6YHK3 1445 aa17.52■□□□□ 0.4
HCFC1R1-206ENST00000574151 ARID4BQ4LE39 1312 aaPredicted RBP17.49■□□□□ 0.39
HCFC1R1-206ENST00000574151 CFAP43Q8NDM7 1665 aa17.49■□□□□ 0.39
HCFC1R1-206ENST00000574151 BCORL1Q5H9F3 1711 aa17.49■□□□□ 0.39
HCFC1R1-206ENST00000574151 MAGI3Q5TCQ9 1506 aa17.48■□□□□ 0.39
HCFC1R1-206ENST00000574151 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
HCFC1R1-206ENST00000574151 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
HCFC1R1-206ENST00000574151 IGF1RP08069 1367 aa17.43■□□□□ 0.38
HCFC1R1-206ENST00000574151 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
HCFC1R1-206ENST00000574151 ARAP3Q8WWN8 1544 aa17.39■□□□□ 0.37
HCFC1R1-206ENST00000574151 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
HCFC1R1-206ENST00000574151 RAPGEF3O95398 923 aa17.38■□□□□ 0.37
HCFC1R1-206ENST00000574151 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
HCFC1R1-206ENST00000574151 STRCQ7RTU9 1775 aa17.28■□□□□ 0.36
HCFC1R1-206ENST00000574151 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
HCFC1R1-206ENST00000574151 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
HCFC1R1-206ENST00000574151 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
HCFC1R1-206ENST00000574151 MLECQ14165 292 aa17.23■□□□□ 0.35
HCFC1R1-206ENST00000574151 YEATS2Q9ULM3 1422 aa17.22■□□□□ 0.35
HCFC1R1-206ENST00000574151 ARID3CA6NKF2 412 aa17.22■□□□□ 0.35
HCFC1R1-206ENST00000574151 SUPT5HO00267 1087 aaKnown RBP17.22■□□□□ 0.35
HCFC1R1-206ENST00000574151 FRMPD1Q5SYB0 1578 aa17.21■□□□□ 0.35
HCFC1R1-206ENST00000574151 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.34
HCFC1R1-206ENST00000574151 FER1L4A9Z1Z3 1794 aa17.2■□□□□ 0.34
HCFC1R1-206ENST00000574151 PHLDB1Q86UU1 1377 aa17.2■□□□□ 0.34
HCFC1R1-206ENST00000574151 PREX1Q8TCU6 1659 aa17.2■□□□□ 0.34
HCFC1R1-206ENST00000574151 SIGLEC1Q9BZZ2 1709 aa17.17■□□□□ 0.34
HCFC1R1-206ENST00000574151 ABCA8O94911 1581 aa17.15■□□□□ 0.34
HCFC1R1-206ENST00000574151 POGZQ7Z3K3 1410 aa17.15■□□□□ 0.34
HCFC1R1-206ENST00000574151 ARHGEF40Q8TER5 1519 aa17.15■□□□□ 0.34
HCFC1R1-206ENST00000574151 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
HCFC1R1-206ENST00000574151 CEBPAP49715 358 aaPredicted RBP17.14■□□□□ 0.33
HCFC1R1-206ENST00000574151 FANCAO15360 1455 aa17.12■□□□□ 0.33
HCFC1R1-206ENST00000574151 NEO1Q92859 1461 aa17.12■□□□□ 0.33
HCFC1R1-206ENST00000574151 LTBP4Q8N2S1 1624 aa17.12■□□□□ 0.33
HCFC1R1-206ENST00000574151 TTC37Q6PGP7 1564 aa17.11■□□□□ 0.33
HCFC1R1-206ENST00000574151 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
HCFC1R1-206ENST00000574151 RICTORQ6R327 1708 aa17.1■□□□□ 0.33
HCFC1R1-206ENST00000574151 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
HCFC1R1-206ENST00000574151 IQSEC2Q5JU85 1478 aa17.06■□□□□ 0.32
HCFC1R1-206ENST00000574151 PTPRTO14522 1441 aa17.06■□□□□ 0.32
HCFC1R1-206ENST00000574151 AKNAQ7Z591 1439 aa17.06■□□□□ 0.32
HCFC1R1-206ENST00000574151 MED1Q15648 1581 aaPredicted RBP17.06■□□□□ 0.32
HCFC1R1-206ENST00000574151 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
HCFC1R1-206ENST00000574151 ATP10BO94823 1461 aa17.04■□□□□ 0.32
HCFC1R1-206ENST00000574151 UHRF1BP1Q6BDS2 1440 aa17.03■□□□□ 0.32
HCFC1R1-206ENST00000574151 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
HCFC1R1-206ENST00000574151 ZFYVE16Q7Z3T8 1539 aa17.01■□□□□ 0.31
HCFC1R1-206ENST00000574151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
HCFC1R1-206ENST00000574151 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
HCFC1R1-206ENST00000574151 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
HCFC1R1-206ENST00000574151 CTTNBP2Q8WZ74 1663 aa17■□□□□ 0.31
HCFC1R1-206ENST00000574151 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
HCFC1R1-206ENST00000574151 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms