RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.18
ABR-218ENST00000572585 RAPGEF2Q9Y4G8 1499 aa16.14■□□□□ 0.17
ABR-218ENST00000572585 RAB3GAP2Q9H2M9 1393 aa16.14■□□□□ 0.17
ABR-218ENST00000572585 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
ABR-218ENST00000572585 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
ABR-218ENST00000572585 CUX2O14529 1486 aa16.08■□□□□ 0.16
ABR-218ENST00000572585 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
ABR-218ENST00000572585 SETD5Q9C0A6 1442 aa16.06■□□□□ 0.16
ABR-218ENST00000572585 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
ABR-218ENST00000572585 B4GALNT3Q6L9W6 998 aa16.05■□□□□ 0.16
ABR-218ENST00000572585 TONSLQ96HA7 1378 aa16.03■□□□□ 0.16
ABR-218ENST00000572585 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
ABR-218ENST00000572585 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
ABR-218ENST00000572585 SALL2Q9Y467 1007 aaPredicted RBP16.01■□□□□ 0.15
ABR-218ENST00000572585 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
ABR-218ENST00000572585 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
ABR-218ENST00000572585 MAPKBP1O60336 1514 aa15.97■□□□□ 0.15
ABR-218ENST00000572585 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
ABR-218ENST00000572585 ARAP1Q96P48 1450 aa15.96■□□□□ 0.15
ABR-218ENST00000572585 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
ABR-218ENST00000572585 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
ABR-218ENST00000572585 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
ABR-218ENST00000572585 FAM9BQ8IZU0 186 aa15.92■□□□□ 0.14
ABR-218ENST00000572585 IL27Q8NEV9 243 aa15.89■□□□□ 0.13
ABR-218ENST00000572585 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
ABR-218ENST00000572585 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.88■□□□□ 0.13
ABR-218ENST00000572585 ERICH3Q5RHP9 1530 aa15.87■□□□□ 0.13
ABR-218ENST00000572585 EIF5BO60841 1220 aaKnown RBP15.86■□□□□ 0.13
ABR-218ENST00000572585 NPM2Q86SE8 214 aaKnown RBP15.85■□□□□ 0.13
ABR-218ENST00000572585 NEFMP07197 916 aa15.85■□□□□ 0.13
ABR-218ENST00000572585 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
ABR-218ENST00000572585 ZBED9Q6R2W3 1325 aa15.83■□□□□ 0.12
ABR-218ENST00000572585 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
ABR-218ENST00000572585 PRXQ9BXM0 1461 aa15.82■□□□□ 0.12
ABR-218ENST00000572585 UBE2Q2Q8WVN8 375 aa15.81■□□□□ 0.12
ABR-218ENST00000572585 EIF4G2P78344 907 aaKnown RBP eCLIP15.79■□□□□ 0.12
ABR-218ENST00000572585 LAS1LQ9Y4W2 734 aaKnown RBP15.79■□□□□ 0.12
ABR-218ENST00000572585 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
ABR-218ENST00000572585 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
ABR-218ENST00000572585 HSPA5P11021 654 aaKnown RBP15.76■□□□□ 0.11
ABR-218ENST00000572585 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
ABR-218ENST00000572585 ARHGAP35Q9NRY4 1499 aa15.74■□□□□ 0.11
ABR-218ENST00000572585 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
ABR-218ENST00000572585 WASHC2AQ641Q2 1341 aa15.73■□□□□ 0.11
ABR-218ENST00000572585 PHLDB1Q86UU1 1377 aa15.73■□□□□ 0.11
ABR-218ENST00000572585 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
ABR-218ENST00000572585 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
ABR-218ENST00000572585 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
ABR-218ENST00000572585 CCDC184Q52MB2 194 aa15.69■□□□□ 0.1
ABR-218ENST00000572585 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
ABR-218ENST00000572585 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
ABR-218ENST00000572585 DDRGK1Q96HY6 314 aa15.69■□□□□ 0.1
ABR-218ENST00000572585 CNTLNQ9NXG0 1405 aa15.68■□□□□ 0.1
ABR-218ENST00000572585 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
ABR-218ENST00000572585 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
ABR-218ENST00000572585 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
ABR-218ENST00000572585 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
ABR-218ENST00000572585 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
ABR-218ENST00000572585 GSE1Q14687 1217 aa15.64■□□□□ 0.09
ABR-218ENST00000572585 SMG6Q86US8 1419 aaKnown RBP15.64■□□□□ 0.09
ABR-218ENST00000572585 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
ABR-218ENST00000572585 WASHC2CQ9Y4E1 1318 aa15.63■□□□□ 0.09
ABR-218ENST00000572585 GLIPR1L2Q4G1C9 344 aa15.62■□□□□ 0.09
ABR-218ENST00000572585 UACAQ9BZF9 1416 aa15.62■□□□□ 0.09
ABR-218ENST00000572585 CCDC18Q5T9S5 1454 aa15.62■□□□□ 0.09
ABR-218ENST00000572585 PDE4AP27815 886 aa15.61■□□□□ 0.09
ABR-218ENST00000572585 BRPF3Q9ULD4 1205 aa15.61■□□□□ 0.09
ABR-218ENST00000572585 AKNAQ7Z591 1439 aa15.61■□□□□ 0.09
ABR-218ENST00000572585 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
ABR-218ENST00000572585 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
ABR-218ENST00000572585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.59■□□□□ 0.09
ABR-218ENST00000572585 CCDC7Q96M83 1385 aa15.58■□□□□ 0.08
ABR-218ENST00000572585 MS4A1P11836 297 aa15.58■□□□□ 0.08
ABR-218ENST00000572585 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
ABR-218ENST00000572585 FBLN2P98095 1184 aa15.56■□□□□ 0.08
ABR-218ENST00000572585 TMC1Q8TDI8 760 aa15.55■□□□□ 0.08
ABR-218ENST00000572585 FMN1Q68DA7 1419 aa15.53■□□□□ 0.08
ABR-218ENST00000572585 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
ABR-218ENST00000572585 BACH2Q9BYV9 841 aa15.53■□□□□ 0.08
ABR-218ENST00000572585 RNF123Q5XPI4 1314 aa15.53■□□□□ 0.08
ABR-218ENST00000572585 NCOA2Q15596 1464 aa15.52■□□□□ 0.08
ABR-218ENST00000572585 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.07
ABR-218ENST00000572585 BIVM-ERCC5R4GMW8 1640 aa15.51■□□□□ 0.07
ABR-218ENST00000572585 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
ABR-218ENST00000572585 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
ABR-218ENST00000572585 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
ABR-218ENST00000572585 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
ABR-218ENST00000572585 FGD6Q6ZV73 1430 aa15.49■□□□□ 0.07
ABR-218ENST00000572585 RRP1P56182 461 aaKnown RBP15.48■□□□□ 0.07
ABR-218ENST00000572585 EXOC6Q8TAG9 804 aa15.48■□□□□ 0.07
ABR-218ENST00000572585 L3MBTL2Q969R5 705 aa15.48■□□□□ 0.07
ABR-218ENST00000572585 SENP3-EIF4A1A0A087X0R7 540 aa15.48■□□□□ 0.07
ABR-218ENST00000572585 NCOA1Q15788 1441 aa15.47■□□□□ 0.07
ABR-218ENST00000572585 RRP7BPQ9NSQ0 103 aa15.47■□□□□ 0.07
ABR-218ENST00000572585 FAM43AQ8N2R8 423 aa15.47■□□□□ 0.07
ABR-218ENST00000572585 PKNOX2Q96KN3 472 aa15.46■□□□□ 0.07
ABR-218ENST00000572585 KIF7Q2M1P5 1343 aa15.46■□□□□ 0.06
ABR-218ENST00000572585 RCAN3Q9UKA8 241 aa15.46■□□□□ 0.06
ABR-218ENST00000572585 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
ABR-218ENST00000572585 CHIC2Q9UKJ5 165 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms