RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
SMG6-211ENST00000572369 MAPKBP1O60336 1514 aa13.41□□□□□ -0.26
SMG6-211ENST00000572369 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
SMG6-211ENST00000572369 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
SMG6-211ENST00000572369 TSPOAP1O95153 1857 aa13.38□□□□□ -0.27
SMG6-211ENST00000572369 PBRM1Q86U86 1689 aa13.36□□□□□ -0.27
SMG6-211ENST00000572369 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
SMG6-211ENST00000572369 SHROOM2Q13796 1616 aa13.31□□□□□ -0.28
SMG6-211ENST00000572369 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
SMG6-211ENST00000572369 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMG6-211ENST00000572369 NUP160Q12769 1436 aa13.23□□□□□ -0.29
SMG6-211ENST00000572369 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
SMG6-211ENST00000572369 PPRC1Q5VV67 1664 aaKnown RBP13.21□□□□□ -0.29
SMG6-211ENST00000572369 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.29
SMG6-211ENST00000572369 CERKQ8TCT0 537 aa13.21□□□□□ -0.29
SMG6-211ENST00000572369 ERICH3Q5RHP9 1530 aa13.21□□□□□ -0.29
SMG6-211ENST00000572369 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
SMG6-211ENST00000572369 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
SMG6-211ENST00000572369 COL17A1Q9UMD9 1497 aaPredicted RBP13.19□□□□□ -0.3
SMG6-211ENST00000572369 FHAD1B1AJZ9 1412 aa13.17□□□□□ -0.3
SMG6-211ENST00000572369 PRG4Q92954 1404 aaPredicted RBP13.17□□□□□ -0.3
SMG6-211ENST00000572369 PCF11O94913 1555 aaKnown RBP13.14□□□□□ -0.31
SMG6-211ENST00000572369 CUL7Q14999 1698 aa13.13□□□□□ -0.31
SMG6-211ENST00000572369 IGF1RP08069 1367 aa13.09□□□□□ -0.31
SMG6-211ENST00000572369 GLI2P10070 1586 aa13.09□□□□□ -0.31
SMG6-211ENST00000572369 PTPRMP28827 1452 aa13.07□□□□□ -0.32
SMG6-211ENST00000572369 CARMIL1Q5VZK9 1371 aa13.06□□□□□ -0.32
SMG6-211ENST00000572369 RUSC2Q8N2Y8 1516 aa13.05□□□□□ -0.32
SMG6-211ENST00000572369 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
SMG6-211ENST00000572369 TEX14Q8IWB6 1497 aa13.03□□□□□ -0.32
SMG6-211ENST00000572369 KIF21BO75037 1637 aa13.02□□□□□ -0.32
SMG6-211ENST00000572369 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
SMG6-211ENST00000572369 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
SMG6-211ENST00000572369 PLB1Q6P1J6 1458 aa12.98□□□□□ -0.33
SMG6-211ENST00000572369 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
SMG6-211ENST00000572369 ASXL2Q76L83 1435 aa12.98□□□□□ -0.33
SMG6-211ENST00000572369 ADAMTSL3P82987 1691 aa12.98□□□□□ -0.33
SMG6-211ENST00000572369 KIAA0586Q9BVV6 1533 aa12.96□□□□□ -0.33
SMG6-211ENST00000572369 HSPA2P54652 639 aa12.95□□□□□ -0.34
SMG6-211ENST00000572369 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
SMG6-211ENST00000572369 CTTNBP2Q8WZ74 1663 aa12.93□□□□□ -0.34
SMG6-211ENST00000572369 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
SMG6-211ENST00000572369 EEA1Q15075 1411 aa12.93□□□□□ -0.34
SMG6-211ENST00000572369 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
SMG6-211ENST00000572369 IQGAP2Q13576 1575 aa12.92□□□□□ -0.34
SMG6-211ENST00000572369 EPRSP07814 1512 aaKnown RBP12.9□□□□□ -0.34
SMG6-211ENST00000572369 PRXQ9BXM0 1461 aa12.89□□□□□ -0.35
SMG6-211ENST00000572369 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
SMG6-211ENST00000572369 TTBK1Q5TCY1 1321 aaPredicted RBP12.88□□□□□ -0.35
SMG6-211ENST00000572369 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
SMG6-211ENST00000572369 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
SMG6-211ENST00000572369 BCORL1Q5H9F3 1711 aa12.82□□□□□ -0.36
SMG6-211ENST00000572369 UGGT2Q9NYU1 1516 aa12.81□□□□□ -0.36
SMG6-211ENST00000572369 PTPRGP23470 1445 aa12.8□□□□□ -0.36
SMG6-211ENST00000572369 MED1Q15648 1581 aaPredicted RBP12.8□□□□□ -0.36
SMG6-211ENST00000572369 TNIKQ9UKE5 1360 aa12.8□□□□□ -0.36
SMG6-211ENST00000572369 KIAA0556O60303 1618 aa12.79□□□□□ -0.36
SMG6-211ENST00000572369 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
SMG6-211ENST00000572369 RIMS1Q86UR5 1692 aaKnown RBP12.78□□□□□ -0.36
SMG6-211ENST00000572369 DISP1Q96F81 1524 aa12.78□□□□□ -0.36
SMG6-211ENST00000572369 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
SMG6-211ENST00000572369 UHRF1BP1LA0JNW5 1464 aa12.77□□□□□ -0.37
SMG6-211ENST00000572369 IQSEC2Q5JU85 1478 aa12.77□□□□□ -0.37
SMG6-211ENST00000572369 MAGI3Q5TCQ9 1506 aa12.77□□□□□ -0.37
SMG6-211ENST00000572369 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
SMG6-211ENST00000572369 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
SMG6-211ENST00000572369 DMRT2Q9Y5R5 561 aa12.73□□□□□ -0.37
SMG6-211ENST00000572369 YEATS2Q9ULM3 1422 aa12.72□□□□□ -0.37
SMG6-211ENST00000572369 KDM5BQ9UGL1 1544 aa12.72□□□□□ -0.37
SMG6-211ENST00000572369 CD109Q6YHK3 1445 aa12.71□□□□□ -0.38
SMG6-211ENST00000572369 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
SMG6-211ENST00000572369 UACAQ9BZF9 1416 aa12.7□□□□□ -0.38
SMG6-211ENST00000572369 ZCCHC11Q5TAX3 1644 aaKnown RBP12.7□□□□□ -0.38
SMG6-211ENST00000572369 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
SMG6-211ENST00000572369 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
SMG6-211ENST00000572369 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
SMG6-211ENST00000572369 ARAP3Q8WWN8 1544 aa12.69□□□□□ -0.38
SMG6-211ENST00000572369 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
SMG6-211ENST00000572369 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
SMG6-211ENST00000572369 WDR7Q9Y4E6 1490 aa12.67□□□□□ -0.38
SMG6-211ENST00000572369 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
SMG6-211ENST00000572369 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
SMG6-211ENST00000572369 PREX1Q8TCU6 1659 aa12.64□□□□□ -0.39
SMG6-211ENST00000572369 PTPRTO14522 1441 aa12.62□□□□□ -0.39
SMG6-211ENST00000572369 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
SMG6-211ENST00000572369 ABCA8O94911 1581 aa12.62□□□□□ -0.39
SMG6-211ENST00000572369 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
SMG6-211ENST00000572369 RAPGEF6Q8TEU7 1601 aa12.61□□□□□ -0.39
SMG6-211ENST00000572369 ARID3CA6NKF2 412 aa12.59□□□□□ -0.39
SMG6-211ENST00000572369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
SMG6-211ENST00000572369 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
SMG6-211ENST00000572369 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
SMG6-211ENST00000572369 ATP1B4Q9UN42 357 aaPredicted RBP12.56□□□□□ -0.4
SMG6-211ENST00000572369 ARHGAP35Q9NRY4 1499 aa12.56□□□□□ -0.4
SMG6-211ENST00000572369 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
SMG6-211ENST00000572369 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
SMG6-211ENST00000572369 HSPA1LP34931 641 aa12.55□□□□□ -0.4
SMG6-211ENST00000572369 FRMPD1Q5SYB0 1578 aa12.54□□□□□ -0.4
SMG6-211ENST00000572369 FMN1Q68DA7 1419 aa12.54□□□□□ -0.4
SMG6-211ENST00000572369 POGZQ7Z3K3 1410 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms