RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 NESP48681 1621 aa23.04■■□□□ 1.28
RAB40B-206ENST00000571995 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
RAB40B-206ENST00000571995 KCNH8Q96L42 1107 aa23.02■■□□□ 1.28
RAB40B-206ENST00000571995 CUX1P39880 1505 aa23.01■■□□□ 1.27
RAB40B-206ENST00000571995 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
RAB40B-206ENST00000571995 FOXD1Q16676 465 aa22.97■■□□□ 1.27
RAB40B-206ENST00000571995 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
RAB40B-206ENST00000571995 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
RAB40B-206ENST00000571995 DHX57Q6P158 1386 aaKnown RBP22.95■■□□□ 1.26
RAB40B-206ENST00000571995 NEFLP07196 543 aa22.94■■□□□ 1.26
RAB40B-206ENST00000571995 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
RAB40B-206ENST00000571995 FANCD2Q9BXW9 1451 aa22.93■■□□□ 1.26
RAB40B-206ENST00000571995 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
RAB40B-206ENST00000571995 ANP32CO43423 234 aa22.89■■□□□ 1.26
RAB40B-206ENST00000571995 CFTRP13569 1480 aa22.89■■□□□ 1.25
RAB40B-206ENST00000571995 PRXQ9BXM0 1461 aa22.86■■□□□ 1.25
RAB40B-206ENST00000571995 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
RAB40B-206ENST00000571995 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
RAB40B-206ENST00000571995 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
RAB40B-206ENST00000571995 IRX6P78412 446 aaPredicted RBP22.79■■□□□ 1.24
RAB40B-206ENST00000571995 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
RAB40B-206ENST00000571995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.24
RAB40B-206ENST00000571995 FKBP8Q14318 412 aa22.77■■□□□ 1.24
RAB40B-206ENST00000571995 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
RAB40B-206ENST00000571995 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
RAB40B-206ENST00000571995 SETD5Q9C0A6 1442 aa22.75■■□□□ 1.23
RAB40B-206ENST00000571995 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
RAB40B-206ENST00000571995 CC2D2AQ9P2K1 1620 aa22.72■■□□□ 1.23
RAB40B-206ENST00000571995 FAM9BQ8IZU0 186 aa22.7■■□□□ 1.22
RAB40B-206ENST00000571995 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
RAB40B-206ENST00000571995 CDK11AQ9UQ88 783 aaPredicted RBP22.69■■□□□ 1.22
RAB40B-206ENST00000571995 HNRNPUQ00839 825 aaKnown RBP eCLIP22.68■■□□□ 1.22
RAB40B-206ENST00000571995 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
RAB40B-206ENST00000571995 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.21
RAB40B-206ENST00000571995 HMGXB3Q12766 1538 aa22.63■■□□□ 1.21
RAB40B-206ENST00000571995 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
RAB40B-206ENST00000571995 CFDP1Q9UEE9 299 aaPredicted RBP22.62■■□□□ 1.21
RAB40B-206ENST00000571995 CLSPNQ9HAW4 1339 aa22.61■■□□□ 1.21
RAB40B-206ENST00000571995 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
RAB40B-206ENST00000571995 ZNF644Q9H582 1327 aaPredicted RBP22.59■■□□□ 1.21
RAB40B-206ENST00000571995 PDS5BQ9NTI5 1447 aa22.59■■□□□ 1.21
RAB40B-206ENST00000571995 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.21
RAB40B-206ENST00000571995 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
RAB40B-206ENST00000571995 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
RAB40B-206ENST00000571995 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
RAB40B-206ENST00000571995 SUPT16HQ9Y5B9 1047 aaKnown RBP22.52■■□□□ 1.19
RAB40B-206ENST00000571995 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
RAB40B-206ENST00000571995 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
RAB40B-206ENST00000571995 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
RAB40B-206ENST00000571995 FMN1Q68DA7 1419 aa22.48■■□□□ 1.19
RAB40B-206ENST00000571995 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
RAB40B-206ENST00000571995 TSPY4P0CV99 314 aa22.48■■□□□ 1.19
RAB40B-206ENST00000571995 TSPY10P0CW01 314 aa22.48■■□□□ 1.19
RAB40B-206ENST00000571995 EIF4G2P78344 907 aaKnown RBP eCLIP22.47■■□□□ 1.191e-6■■■■■ 29.4
RAB40B-206ENST00000571995 HSPA5P11021 654 aaKnown RBP22.45■■□□□ 1.18
RAB40B-206ENST00000571995 MPHOSPH9Q99550 1183 aa22.44■■□□□ 1.18
RAB40B-206ENST00000571995 MRS2Q9HD23 443 aa22.44■■□□□ 1.18
RAB40B-206ENST00000571995 L3MBTL2Q969R5 705 aa22.43■■□□□ 1.18
RAB40B-206ENST00000571995 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
RAB40B-206ENST00000571995 CHGAP10645 457 aaKnown RBP22.37■■□□□ 1.17
RAB40B-206ENST00000571995 FGD6Q6ZV73 1430 aa22.35■■□□□ 1.17
RAB40B-206ENST00000571995 ERICH6Q7L0X2 663 aa22.34■■□□□ 1.17
RAB40B-206ENST00000571995 JPH4Q96JJ6 628 aa22.34■■□□□ 1.17
RAB40B-206ENST00000571995 HNRNPMP52272 730 aaKnown RBP eCLIP22.33■■□□□ 1.17
RAB40B-206ENST00000571995 TIAM1Q13009 1591 aa22.32■■□□□ 1.16
RAB40B-206ENST00000571995 PKD2Q13563 968 aa22.32■■□□□ 1.16
RAB40B-206ENST00000571995 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
RAB40B-206ENST00000571995 CCDC18Q5T9S5 1454 aa22.3■■□□□ 1.16
RAB40B-206ENST00000571995 PCF11O94913 1555 aaKnown RBP22.29■■□□□ 1.16
RAB40B-206ENST00000571995 CASKIN1Q8WXD9 1431 aa22.27■■□□□ 1.16
RAB40B-206ENST00000571995 NCOA2Q15596 1464 aa22.26■■□□□ 1.15
RAB40B-206ENST00000571995 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
RAB40B-206ENST00000571995 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
RAB40B-206ENST00000571995 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
RAB40B-206ENST00000571995 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
RAB40B-206ENST00000571995 CARD11Q9BXL7 1154 aa22.21■■□□□ 1.15
RAB40B-206ENST00000571995 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
RAB40B-206ENST00000571995 MYOM3Q5VTT5 1437 aa22.19■■□□□ 1.14
RAB40B-206ENST00000571995 TMC1Q8TDI8 760 aa22.19■■□□□ 1.14
RAB40B-206ENST00000571995 PTPRKQ15262 1439 aa22.19■■□□□ 1.14
RAB40B-206ENST00000571995 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
RAB40B-206ENST00000571995 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
RAB40B-206ENST00000571995 CCDC184Q52MB2 194 aa22.14■■□□□ 1.14
RAB40B-206ENST00000571995 TIMELESSQ9UNS1 1208 aa22.13■■□□□ 1.13
RAB40B-206ENST00000571995 FYCO1Q9BQS8 1478 aa22.13■■□□□ 1.13
RAB40B-206ENST00000571995 NUP155O75694 1391 aa22.12■■□□□ 1.13
RAB40B-206ENST00000571995 NBPF8Q3BBV2 869 aa22.1■■□□□ 1.13
RAB40B-206ENST00000571995 WASHC2AQ641Q2 1341 aa22.09■■□□□ 1.13
RAB40B-206ENST00000571995 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
RAB40B-206ENST00000571995 B4GALNT3Q6L9W6 998 aa22.07■■□□□ 1.12
RAB40B-206ENST00000571995 MAPKBP1O60336 1514 aa22.07■■□□□ 1.12
RAB40B-206ENST00000571995 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
RAB40B-206ENST00000571995 CC2D1BQ5T0F9 858 aaKnown RBP22.06■■□□□ 1.12
RAB40B-206ENST00000571995 NAIPQ13075 1403 aa22.05■■□□□ 1.12
RAB40B-206ENST00000571995 BCL11AQ9H165 835 aa22.05■■□□□ 1.12
RAB40B-206ENST00000571995 UACAQ9BZF9 1416 aa22.05■■□□□ 1.12
RAB40B-206ENST00000571995 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
RAB40B-206ENST00000571995 TSHZ2Q9NRE2 1034 aa22.03■■□□□ 1.12
RAB40B-206ENST00000571995 CCER2I3L3R5 266 aa22■■□□□ 1.11
RAB40B-206ENST00000571995 GRIN2BQ13224 1484 aa21.99■■□□□ 1.11
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