RNA–Protein interactions for RNA: ENST00000569997.1

COX4I1-217, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

Gene COX4I1, Length 3,946 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-217ENST00000569997 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
COX4I1-217ENST00000569997 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
COX4I1-217ENST00000569997 TRIM52Q96A61 297 aa13.53□□□□□ -0.24
COX4I1-217ENST00000569997 FBLN2P98095 1184 aa13.52□□□□□ -0.25
COX4I1-217ENST00000569997 FHOD3Q2V2M9 1422 aa13.51□□□□□ -0.25
COX4I1-217ENST00000569997 DHX57Q6P158 1386 aaKnown RBP13.5□□□□□ -0.25
COX4I1-217ENST00000569997 NESP48681 1621 aa13.5□□□□□ -0.25
COX4I1-217ENST00000569997 RAB3GAP2Q9H2M9 1393 aa13.47□□□□□ -0.25
COX4I1-217ENST00000569997 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
COX4I1-217ENST00000569997 SETD5Q9C0A6 1442 aa13.46□□□□□ -0.25
COX4I1-217ENST00000569997 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
COX4I1-217ENST00000569997 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
COX4I1-217ENST00000569997 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
COX4I1-217ENST00000569997 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
COX4I1-217ENST00000569997 CDK11AQ9UQ88 783 aaPredicted RBP13.44□□□□□ -0.26
COX4I1-217ENST00000569997 CHIC2Q9UKJ5 165 aa13.44□□□□□ -0.26
COX4I1-217ENST00000569997 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
COX4I1-217ENST00000569997 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
COX4I1-217ENST00000569997 DNMBPQ6XZF7 1577 aa13.42□□□□□ -0.26
COX4I1-217ENST00000569997 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
COX4I1-217ENST00000569997 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.26
COX4I1-217ENST00000569997 CHMP7Q8WUX9 453 aaPredicted RBP13.39□□□□□ -0.27
COX4I1-217ENST00000569997 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
COX4I1-217ENST00000569997 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
COX4I1-217ENST00000569997 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
COX4I1-217ENST00000569997 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
COX4I1-217ENST00000569997 ANP32CO43423 234 aa13.37□□□□□ -0.27
COX4I1-217ENST00000569997 NEFLP07196 543 aa13.35□□□□□ -0.27
COX4I1-217ENST00000569997 TIAM1Q13009 1591 aa13.34□□□□□ -0.27
COX4I1-217ENST00000569997 ZNF777Q9ULD5 760 aaPredicted RBP13.34□□□□□ -0.27
COX4I1-217ENST00000569997 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
COX4I1-217ENST00000569997 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.27
COX4I1-217ENST00000569997 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
COX4I1-217ENST00000569997 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
COX4I1-217ENST00000569997 ERCC6Q03468 1493 aa13.32□□□□□ -0.28
COX4I1-217ENST00000569997 EFCAB5A4FU69 1503 aa13.31□□□□□ -0.28
COX4I1-217ENST00000569997 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
COX4I1-217ENST00000569997 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
COX4I1-217ENST00000569997 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
COX4I1-217ENST00000569997 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.28
COX4I1-217ENST00000569997 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.296e-9■■■■■ 43.9
COX4I1-217ENST00000569997 FGD6Q6ZV73 1430 aa13.26□□□□□ -0.29
COX4I1-217ENST00000569997 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
COX4I1-217ENST00000569997 CUL7Q14999 1698 aa13.25□□□□□ -0.29
COX4I1-217ENST00000569997 PCF11O94913 1555 aaKnown RBP13.24□□□□□ -0.29
COX4I1-217ENST00000569997 PPP1R15AO75807 674 aaPredicted RBP13.24□□□□□ -0.29
COX4I1-217ENST00000569997 ZNF326Q5BKZ1 582 aaKnown RBP13.23□□□□□ -0.29
COX4I1-217ENST00000569997 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
COX4I1-217ENST00000569997 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
COX4I1-217ENST00000569997 PLEKHD1A6NEE1 506 aa13.21□□□□□ -0.3
COX4I1-217ENST00000569997 MYOM3Q5VTT5 1437 aa13.2□□□□□ -0.3
COX4I1-217ENST00000569997 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
COX4I1-217ENST00000569997 GRIN2BQ13224 1484 aa13.19□□□□□ -0.3
COX4I1-217ENST00000569997 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
COX4I1-217ENST00000569997 NCOA2Q15596 1464 aa13.19□□□□□ -0.3
COX4I1-217ENST00000569997 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
COX4I1-217ENST00000569997 EIF4G2P78344 907 aaKnown RBP eCLIP13.18□□□□□ -0.3
COX4I1-217ENST00000569997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.18□□□□□ -0.3
COX4I1-217ENST00000569997 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
COX4I1-217ENST00000569997 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
COX4I1-217ENST00000569997 BCANQ96GW7 911 aa13.15□□□□□ -0.3
COX4I1-217ENST00000569997 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
COX4I1-217ENST00000569997 MPHOSPH9Q99550 1183 aa13.14□□□□□ -0.31
COX4I1-217ENST00000569997 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
COX4I1-217ENST00000569997 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
COX4I1-217ENST00000569997 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
COX4I1-217ENST00000569997 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
COX4I1-217ENST00000569997 FOXD1Q16676 465 aa13.12□□□□□ -0.31
COX4I1-217ENST00000569997 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
COX4I1-217ENST00000569997 HFM1A2PYH4 1435 aa13.1□□□□□ -0.31
COX4I1-217ENST00000569997 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
COX4I1-217ENST00000569997 FKBP8Q14318 412 aa13.08□□□□□ -0.32
COX4I1-217ENST00000569997 IQGAP2Q13576 1575 aa13.07□□□□□ -0.32
COX4I1-217ENST00000569997 CTTNBP2Q8WZ74 1663 aa13.07□□□□□ -0.32
COX4I1-217ENST00000569997 CCER2I3L3R5 266 aa13.06□□□□□ -0.32
COX4I1-217ENST00000569997 HSPA5P11021 654 aaKnown RBP13.06□□□□□ -0.32
COX4I1-217ENST00000569997 CFAP43Q8NDM7 1665 aa13.06□□□□□ -0.32
COX4I1-217ENST00000569997 KCNH8Q96L42 1107 aa13.06□□□□□ -0.32
COX4I1-217ENST00000569997 EPRSP07814 1512 aaKnown RBP13.05□□□□□ -0.32
COX4I1-217ENST00000569997 L3MBTL2Q969R5 705 aa13.05□□□□□ -0.32
COX4I1-217ENST00000569997 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
COX4I1-217ENST00000569997 SNAPC4Q5SXM2 1469 aa13.05□□□□□ -0.32
COX4I1-217ENST00000569997 ZNF644Q9H582 1327 aaPredicted RBP13.05□□□□□ -0.32
COX4I1-217ENST00000569997 NAIPQ13075 1403 aa13.05□□□□□ -0.32
COX4I1-217ENST00000569997 HECW1Q76N89 1606 aa13.05□□□□□ -0.32
COX4I1-217ENST00000569997 MAPKBP1O60336 1514 aa13.04□□□□□ -0.32
COX4I1-217ENST00000569997 KIAA0586Q9BVV6 1533 aa13.04□□□□□ -0.32
COX4I1-217ENST00000569997 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
COX4I1-217ENST00000569997 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
COX4I1-217ENST00000569997 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
COX4I1-217ENST00000569997 WDR97A6NE52 1622 aa13.02□□□□□ -0.32
COX4I1-217ENST00000569997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.32
COX4I1-217ENST00000569997 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.32
COX4I1-217ENST00000569997 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.32
COX4I1-217ENST00000569997 CDK13Q14004 1512 aaKnown RBP13.02□□□□□ -0.32
COX4I1-217ENST00000569997 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.33
COX4I1-217ENST00000569997 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
COX4I1-217ENST00000569997 FAM9BQ8IZU0 186 aa13.01□□□□□ -0.33
COX4I1-217ENST00000569997 PKD2Q13563 968 aa13.01□□□□□ -0.33
COX4I1-217ENST00000569997 ANKRD30AQ9BXX3 1397 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms