RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 NUP160Q12769 1436 aa12.97□□□□□ -0.33
HERPUD1-217ENST00000569429 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
HERPUD1-217ENST00000569429 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
HERPUD1-217ENST00000569429 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
HERPUD1-217ENST00000569429 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
HERPUD1-217ENST00000569429 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-217ENST00000569429 PPRC1Q5VV67 1664 aaKnown RBP12.87□□□□□ -0.35
HERPUD1-217ENST00000569429 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
HERPUD1-217ENST00000569429 CUX1P39880 1505 aa12.87□□□□□ -0.35
HERPUD1-217ENST00000569429 TOP2BQ02880 1626 aa12.86□□□□□ -0.35
HERPUD1-217ENST00000569429 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
HERPUD1-217ENST00000569429 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
HERPUD1-217ENST00000569429 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
HERPUD1-217ENST00000569429 COL17A1Q9UMD9 1497 aaPredicted RBP12.8□□□□□ -0.36
HERPUD1-217ENST00000569429 GLI2P10070 1586 aa12.78□□□□□ -0.36
HERPUD1-217ENST00000569429 FHAD1B1AJZ9 1412 aa12.78□□□□□ -0.36
HERPUD1-217ENST00000569429 SPATA31D1Q6ZQQ2 1576 aa12.71□□□□□ -0.37
HERPUD1-217ENST00000569429 RUSC2Q8N2Y8 1516 aa12.69□□□□□ -0.38
HERPUD1-217ENST00000569429 PLB1Q6P1J6 1458 aa12.69□□□□□ -0.38
HERPUD1-217ENST00000569429 TEX14Q8IWB6 1497 aa12.68□□□□□ -0.38
HERPUD1-217ENST00000569429 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
HERPUD1-217ENST00000569429 MAP3K4Q9Y6R4 1608 aa12.68□□□□□ -0.38
HERPUD1-217ENST00000569429 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
HERPUD1-217ENST00000569429 ASXL2Q76L83 1435 aa12.66□□□□□ -0.38
HERPUD1-217ENST00000569429 PCF11O94913 1555 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-217ENST00000569429 ABCC2Q92887 1545 aa12.64□□□□□ -0.39
HERPUD1-217ENST00000569429 PTPRMP28827 1452 aa12.63□□□□□ -0.39
HERPUD1-217ENST00000569429 KIF21BO75037 1637 aa12.62□□□□□ -0.39
HERPUD1-217ENST00000569429 ADAMTSL3P82987 1691 aa12.61□□□□□ -0.39
HERPUD1-217ENST00000569429 CUL7Q14999 1698 aa12.61□□□□□ -0.39
HERPUD1-217ENST00000569429 EPRSP07814 1512 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-217ENST00000569429 WRNQ14191 1432 aaPredicted RBP eCLIP12.6□□□□□ -0.39
HERPUD1-217ENST00000569429 KIAA0586Q9BVV6 1533 aa12.59□□□□□ -0.39
HERPUD1-217ENST00000569429 PTPRGP23470 1445 aa12.57□□□□□ -0.4
HERPUD1-217ENST00000569429 UHRF1BP1LA0JNW5 1464 aa12.53□□□□□ -0.4
HERPUD1-217ENST00000569429 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
HERPUD1-217ENST00000569429 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
HERPUD1-217ENST00000569429 BCORL1Q5H9F3 1711 aa12.48□□□□□ -0.41
HERPUD1-217ENST00000569429 KDM5BQ9UGL1 1544 aa12.48□□□□□ -0.41
HERPUD1-217ENST00000569429 HSPA2P54652 639 aa12.48□□□□□ -0.41
HERPUD1-217ENST00000569429 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
HERPUD1-217ENST00000569429 MADDQ8WXG6 1647 aa12.47□□□□□ -0.41
HERPUD1-217ENST00000569429 CFAP43Q8NDM7 1665 aa12.46□□□□□ -0.41
HERPUD1-217ENST00000569429 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
HERPUD1-217ENST00000569429 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
HERPUD1-217ENST00000569429 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-217ENST00000569429 CARMIL2Q6F5E8 1435 aa12.43□□□□□ -0.42
HERPUD1-217ENST00000569429 CD109Q6YHK3 1445 aa12.42□□□□□ -0.42
HERPUD1-217ENST00000569429 ARAP3Q8WWN8 1544 aa12.42□□□□□ -0.42
HERPUD1-217ENST00000569429 RIMS1Q86UR5 1692 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-217ENST00000569429 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.42
HERPUD1-217ENST00000569429 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
HERPUD1-217ENST00000569429 DMRT2Q9Y5R5 561 aa12.34□□□□□ -0.43
HERPUD1-217ENST00000569429 IQSEC2Q5JU85 1478 aa12.34□□□□□ -0.43
HERPUD1-217ENST00000569429 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
HERPUD1-217ENST00000569429 YEATS2Q9ULM3 1422 aa12.32□□□□□ -0.44
HERPUD1-217ENST00000569429 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
HERPUD1-217ENST00000569429 ARID4BQ4LE39 1312 aaPredicted RBP12.32□□□□□ -0.44
HERPUD1-217ENST00000569429 PHLDB1Q86UU1 1377 aa12.31□□□□□ -0.44
HERPUD1-217ENST00000569429 DISP1Q96F81 1524 aa12.3□□□□□ -0.44
HERPUD1-217ENST00000569429 IQGAP2Q13576 1575 aa12.29□□□□□ -0.44
HERPUD1-217ENST00000569429 PREX1Q8TCU6 1659 aa12.28□□□□□ -0.44
HERPUD1-217ENST00000569429 IGF1RP08069 1367 aa12.28□□□□□ -0.44
HERPUD1-217ENST00000569429 LTBP4Q8N2S1 1624 aa12.27□□□□□ -0.44
HERPUD1-217ENST00000569429 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
HERPUD1-217ENST00000569429 RAPGEF3O95398 923 aa12.25□□□□□ -0.45
HERPUD1-217ENST00000569429 PTPRTO14522 1441 aa12.24□□□□□ -0.45
HERPUD1-217ENST00000569429 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
HERPUD1-217ENST00000569429 FER1L4A9Z1Z3 1794 aa12.23□□□□□ -0.45
HERPUD1-217ENST00000569429 FRMPD1Q5SYB0 1578 aa12.23□□□□□ -0.45
HERPUD1-217ENST00000569429 TTC37Q6PGP7 1564 aa12.23□□□□□ -0.45
HERPUD1-217ENST00000569429 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-217ENST00000569429 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
HERPUD1-217ENST00000569429 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.45
HERPUD1-217ENST00000569429 UGGT2Q9NYU1 1516 aa12.2□□□□□ -0.46
HERPUD1-217ENST00000569429 NEO1Q92859 1461 aa12.2□□□□□ -0.46
HERPUD1-217ENST00000569429 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
HERPUD1-217ENST00000569429 FANCAO15360 1455 aa12.19□□□□□ -0.46
HERPUD1-217ENST00000569429 ABCA9Q8IUA7 1624 aa12.19□□□□□ -0.46
HERPUD1-217ENST00000569429 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
HERPUD1-217ENST00000569429 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
HERPUD1-217ENST00000569429 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
HERPUD1-217ENST00000569429 RICTORQ6R327 1708 aa12.16□□□□□ -0.46
HERPUD1-217ENST00000569429 ABCA8O94911 1581 aa12.15□□□□□ -0.46
HERPUD1-217ENST00000569429 UBAP1LF5GYI3 381 aa12.14□□□□□ -0.47
HERPUD1-217ENST00000569429 UHRF1BP1Q6BDS2 1440 aa12.12□□□□□ -0.47
HERPUD1-217ENST00000569429 AKNAQ7Z591 1439 aa12.12□□□□□ -0.47
HERPUD1-217ENST00000569429 ARHGEF12Q9NZN5 1544 aa12.1□□□□□ -0.47
HERPUD1-217ENST00000569429 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
HERPUD1-217ENST00000569429 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
HERPUD1-217ENST00000569429 DENND4BO75064 1496 aaPredicted RBP12.08□□□□□ -0.47
HERPUD1-217ENST00000569429 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
HERPUD1-217ENST00000569429 EFCAB5A4FU69 1503 aa12.07□□□□□ -0.48
HERPUD1-217ENST00000569429 HSPA1LP34931 641 aa12.07□□□□□ -0.48
HERPUD1-217ENST00000569429 CEBPAP49715 358 aaPredicted RBP12.07□□□□□ -0.48
HERPUD1-217ENST00000569429 MLECQ14165 292 aa12.07□□□□□ -0.48
HERPUD1-217ENST00000569429 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
HERPUD1-217ENST00000569429 MAGI2Q86UL8 1455 aa12.06□□□□□ -0.48
HERPUD1-217ENST00000569429 NCOA1Q15788 1441 aa12.04□□□□□ -0.48
HERPUD1-217ENST00000569429 ATP10BO94823 1461 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms