RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 ZNF777Q9ULD5 760 aaPredicted RBP17.9■□□□□ 0.46
TMEM170A-205ENST00000568559 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
TMEM170A-205ENST00000568559 ABCA10Q8WWZ4 1543 aa17.9■□□□□ 0.46
TMEM170A-205ENST00000568559 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
TMEM170A-205ENST00000568559 KIF21BO75037 1637 aa17.87■□□□□ 0.45
TMEM170A-205ENST00000568559 FHOD3Q2V2M9 1422 aa17.86■□□□□ 0.45
TMEM170A-205ENST00000568559 JPH4Q96JJ6 628 aa17.84■□□□□ 0.45
TMEM170A-205ENST00000568559 YTHDC1Q96MU7 727 aaKnown RBP17.84■□□□□ 0.45
TMEM170A-205ENST00000568559 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.44
TMEM170A-205ENST00000568559 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.44
TMEM170A-205ENST00000568559 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
TMEM170A-205ENST00000568559 PLEKHD1A6NEE1 506 aa17.8■□□□□ 0.44
TMEM170A-205ENST00000568559 CARMIL2Q6F5E8 1435 aa17.79■□□□□ 0.44
TMEM170A-205ENST00000568559 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
TMEM170A-205ENST00000568559 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
TMEM170A-205ENST00000568559 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
TMEM170A-205ENST00000568559 ZNF608Q9ULD9 1512 aaPredicted RBP17.76■□□□□ 0.43
TMEM170A-205ENST00000568559 KCNH8Q96L42 1107 aa17.76■□□□□ 0.43
TMEM170A-205ENST00000568559 SNAPC4Q5SXM2 1469 aa17.74■□□□□ 0.43
TMEM170A-205ENST00000568559 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
TMEM170A-205ENST00000568559 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
TMEM170A-205ENST00000568559 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
TMEM170A-205ENST00000568559 ARHGAP35Q9NRY4 1499 aa17.67■□□□□ 0.42
TMEM170A-205ENST00000568559 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
TMEM170A-205ENST00000568559 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
TMEM170A-205ENST00000568559 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
TMEM170A-205ENST00000568559 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
TMEM170A-205ENST00000568559 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
TMEM170A-205ENST00000568559 CUL7Q14999 1698 aa17.6■□□□□ 0.41
TMEM170A-205ENST00000568559 WDR62O43379 1518 aa17.58■□□□□ 0.41
TMEM170A-205ENST00000568559 PTPRGP23470 1445 aa17.58■□□□□ 0.41
TMEM170A-205ENST00000568559 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.41
TMEM170A-205ENST00000568559 TSPY4P0CV99 314 aa17.58■□□□□ 0.4
TMEM170A-205ENST00000568559 TSPY10P0CW01 314 aa17.58■□□□□ 0.4
TMEM170A-205ENST00000568559 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
TMEM170A-205ENST00000568559 MAGI1Q96QZ7 1491 aaPredicted RBP17.55■□□□□ 0.4
TMEM170A-205ENST00000568559 GRIN2AQ12879 1464 aa17.53■□□□□ 0.4
TMEM170A-205ENST00000568559 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
TMEM170A-205ENST00000568559 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
TMEM170A-205ENST00000568559 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
TMEM170A-205ENST00000568559 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
TMEM170A-205ENST00000568559 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
TMEM170A-205ENST00000568559 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
TMEM170A-205ENST00000568559 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
TMEM170A-205ENST00000568559 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
TMEM170A-205ENST00000568559 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
TMEM170A-205ENST00000568559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.38
TMEM170A-205ENST00000568559 FYCO1Q9BQS8 1478 aa17.41■□□□□ 0.38
TMEM170A-205ENST00000568559 ABCA5Q8WWZ7 1642 aa17.41■□□□□ 0.38
TMEM170A-205ENST00000568559 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
TMEM170A-205ENST00000568559 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
TMEM170A-205ENST00000568559 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
TMEM170A-205ENST00000568559 ZNF326Q5BKZ1 582 aaKnown RBP17.37■□□□□ 0.37
TMEM170A-205ENST00000568559 PHLDB1Q86UU1 1377 aa17.36■□□□□ 0.37
TMEM170A-205ENST00000568559 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
TMEM170A-205ENST00000568559 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
TMEM170A-205ENST00000568559 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.36
TMEM170A-205ENST00000568559 PBRM1Q86U86 1689 aa17.32■□□□□ 0.36
TMEM170A-205ENST00000568559 EFCAB2Q5VUJ9 269 aa17.31■□□□□ 0.36
TMEM170A-205ENST00000568559 SETD5Q9C0A6 1442 aa17.31■□□□□ 0.36
TMEM170A-205ENST00000568559 HNRNPMP52272 730 aaKnown RBP eCLIP17.3■□□□□ 0.36
TMEM170A-205ENST00000568559 PCF11O94913 1555 aaKnown RBP17.3■□□□□ 0.36
TMEM170A-205ENST00000568559 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
TMEM170A-205ENST00000568559 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
TMEM170A-205ENST00000568559 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
TMEM170A-205ENST00000568559 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
TMEM170A-205ENST00000568559 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
TMEM170A-205ENST00000568559 RAB3GAP2Q9H2M9 1393 aa17.27■□□□□ 0.36
TMEM170A-205ENST00000568559 ZNF644Q9H582 1327 aaPredicted RBP17.26■□□□□ 0.35
TMEM170A-205ENST00000568559 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
TMEM170A-205ENST00000568559 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
TMEM170A-205ENST00000568559 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
TMEM170A-205ENST00000568559 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
TMEM170A-205ENST00000568559 EPRSP07814 1512 aaKnown RBP17.25■□□□□ 0.35
TMEM170A-205ENST00000568559 HECW1Q76N89 1606 aa17.24■□□□□ 0.35
TMEM170A-205ENST00000568559 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
TMEM170A-205ENST00000568559 DIEXFQ68CQ4 756 aaKnown RBP17.24■□□□□ 0.35
TMEM170A-205ENST00000568559 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
TMEM170A-205ENST00000568559 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
TMEM170A-205ENST00000568559 UACAQ9BZF9 1416 aa17.22■□□□□ 0.35
TMEM170A-205ENST00000568559 NUP160Q12769 1436 aa17.21■□□□□ 0.35
TMEM170A-205ENST00000568559 UGGT2Q9NYU1 1516 aa17.19■□□□□ 0.34
TMEM170A-205ENST00000568559 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
TMEM170A-205ENST00000568559 TROQ12816 1431 aaPredicted RBP17.18■□□□□ 0.34
TMEM170A-205ENST00000568559 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
TMEM170A-205ENST00000568559 RRBP1Q9P2E9 1410 aaKnown RBP17.18■□□□□ 0.34
TMEM170A-205ENST00000568559 EHBP1L1Q8N3D4 1523 aa17.17■□□□□ 0.34
TMEM170A-205ENST00000568559 ANKRD30AQ9BXX3 1397 aa17.17■□□□□ 0.34
TMEM170A-205ENST00000568559 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
TMEM170A-205ENST00000568559 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
TMEM170A-205ENST00000568559 RSPH4AQ5TD94 716 aa17.16■□□□□ 0.34
TMEM170A-205ENST00000568559 CLSPNQ9HAW4 1339 aa17.15■□□□□ 0.34
TMEM170A-205ENST00000568559 MAP3K1Q13233 1512 aa17.15■□□□□ 0.34
TMEM170A-205ENST00000568559 FOXD1Q16676 465 aa17.13■□□□□ 0.33
TMEM170A-205ENST00000568559 KDM2AQ9Y2K7 1162 aa17.13■□□□□ 0.33
TMEM170A-205ENST00000568559 CEP170Q5SW79 1584 aa17.13■□□□□ 0.33
TMEM170A-205ENST00000568559 KIAA0556O60303 1618 aa17.12■□□□□ 0.33
TMEM170A-205ENST00000568559 DISP1Q96F81 1524 aa17.12■□□□□ 0.33
TMEM170A-205ENST00000568559 CENPBP07199 599 aaPredicted RBP17.12■□□□□ 0.33
TMEM170A-205ENST00000568559 SPAG9O60271 1321 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms