RNA–Protein interactions for RNA: ENST00000567869.1

HERC2-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 3,523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-209ENST00000567869 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
HERC2-209ENST00000567869 NESP48681 1621 aa12.56□□□□□ -0.4
HERC2-209ENST00000567869 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
HERC2-209ENST00000567869 DAXXQ9UER7 740 aaPredicted RBP12.54□□□□□ -0.4
HERC2-209ENST00000567869 PKNOX2Q96KN3 472 aa12.53□□□□□ -0.4
HERC2-209ENST00000567869 CUX2O14529 1486 aa12.53□□□□□ -0.4
HERC2-209ENST00000567869 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
HERC2-209ENST00000567869 KCNH8Q96L42 1107 aa12.53□□□□□ -0.4
HERC2-209ENST00000567869 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
HERC2-209ENST00000567869 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
HERC2-209ENST00000567869 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
HERC2-209ENST00000567869 ITGAEP38570 1179 aa12.49□□□□□ -0.41
HERC2-209ENST00000567869 VPS8Q8N3P4 1428 aa12.49□□□□□ -0.41
HERC2-209ENST00000567869 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
HERC2-209ENST00000567869 IGF1RP08069 1367 aa12.47□□□□□ -0.41
HERC2-209ENST00000567869 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
HERC2-209ENST00000567869 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
HERC2-209ENST00000567869 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
HERC2-209ENST00000567869 C11orf95C9JLR9 678 aaPredicted RBP12.44□□□□□ -0.42
HERC2-209ENST00000567869 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
HERC2-209ENST00000567869 WASHC2AQ641Q2 1341 aa12.43□□□□□ -0.42
HERC2-209ENST00000567869 NEFLP07196 543 aa12.41□□□□□ -0.42
HERC2-209ENST00000567869 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
HERC2-209ENST00000567869 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
HERC2-209ENST00000567869 P3H3Q8IVL6 736 aa12.4□□□□□ -0.43
HERC2-209ENST00000567869 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
HERC2-209ENST00000567869 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
HERC2-209ENST00000567869 KANK4Q5T7N3 995 aaPredicted RBP12.39□□□□□ -0.43
HERC2-209ENST00000567869 WASHC2CQ9Y4E1 1318 aa12.38□□□□□ -0.43
HERC2-209ENST00000567869 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
HERC2-209ENST00000567869 DHX57Q6P158 1386 aaKnown RBP12.36□□□□□ -0.43
HERC2-209ENST00000567869 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
HERC2-209ENST00000567869 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
HERC2-209ENST00000567869 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
HERC2-209ENST00000567869 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
HERC2-209ENST00000567869 ARHGAP35Q9NRY4 1499 aa12.35□□□□□ -0.43
HERC2-209ENST00000567869 ATP1B4Q9UN42 357 aaPredicted RBP12.35□□□□□ -0.43
HERC2-209ENST00000567869 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
HERC2-209ENST00000567869 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
HERC2-209ENST00000567869 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
HERC2-209ENST00000567869 TRIM52Q96A61 297 aa12.31□□□□□ -0.44
HERC2-209ENST00000567869 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
HERC2-209ENST00000567869 CDK11AQ9UQ88 783 aaPredicted RBP12.29□□□□□ -0.44
HERC2-209ENST00000567869 NBR1Q14596 966 aa12.28□□□□□ -0.44
HERC2-209ENST00000567869 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
HERC2-209ENST00000567869 KIF21AQ7Z4S6 1674 aa12.27□□□□□ -0.45
HERC2-209ENST00000567869 DDX10Q13206 875 aaKnown RBP12.25□□□□□ -0.45
HERC2-209ENST00000567869 GAPVD1Q14C86 1478 aa12.23□□□□□ -0.45
HERC2-209ENST00000567869 FHOD3Q2V2M9 1422 aa12.23□□□□□ -0.45
HERC2-209ENST00000567869 PPP1R15AO75807 674 aaPredicted RBP12.22□□□□□ -0.45
HERC2-209ENST00000567869 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
HERC2-209ENST00000567869 CCER2I3L3R5 266 aa12.22□□□□□ -0.45
HERC2-209ENST00000567869 ZMYND15Q9H091 742 aa12.21□□□□□ -0.45
HERC2-209ENST00000567869 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.46
HERC2-209ENST00000567869 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
HERC2-209ENST00000567869 CUL7Q14999 1698 aa12.16□□□□□ -0.46
HERC2-209ENST00000567869 WDR97A6NE52 1622 aa12.16□□□□□ -0.46
HERC2-209ENST00000567869 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
HERC2-209ENST00000567869 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
HERC2-209ENST00000567869 FHAD1B1AJZ9 1412 aa12.16□□□□□ -0.46
HERC2-209ENST00000567869 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
HERC2-209ENST00000567869 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
HERC2-209ENST00000567869 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
HERC2-209ENST00000567869 PPP4R2Q9NY27 417 aa12.15□□□□□ -0.47
HERC2-209ENST00000567869 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.47
HERC2-209ENST00000567869 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
HERC2-209ENST00000567869 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
HERC2-209ENST00000567869 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
HERC2-209ENST00000567869 RRBP1Q9P2E9 1410 aaKnown RBP12.13□□□□□ -0.47
HERC2-209ENST00000567869 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
HERC2-209ENST00000567869 PCF11O94913 1555 aaKnown RBP12.12□□□□□ -0.47
HERC2-209ENST00000567869 LRRC9Q6ZRR7 1453 aa12.12□□□□□ -0.47
HERC2-209ENST00000567869 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
HERC2-209ENST00000567869 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
HERC2-209ENST00000567869 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
HERC2-209ENST00000567869 ZNF608Q9ULD9 1512 aaPredicted RBP12.1□□□□□ -0.47
HERC2-209ENST00000567869 ARID3CA6NKF2 412 aa12.1□□□□□ -0.47
HERC2-209ENST00000567869 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
HERC2-209ENST00000567869 EFCAB5A4FU69 1503 aa12.08□□□□□ -0.48
HERC2-209ENST00000567869 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
HERC2-209ENST00000567869 ANP32CO43423 234 aa12.07□□□□□ -0.48
HERC2-209ENST00000567869 CASKIN1Q8WXD9 1431 aa12.07□□□□□ -0.48
HERC2-209ENST00000567869 FMN1Q68DA7 1419 aa12.06□□□□□ -0.48
HERC2-209ENST00000567869 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
HERC2-209ENST00000567869 FBLN2P98095 1184 aa12.06□□□□□ -0.48
HERC2-209ENST00000567869 FAM43AQ8N2R8 423 aa12.06□□□□□ -0.48
HERC2-209ENST00000567869 HNRNPUQ00839 825 aaKnown RBP eCLIP12.05□□□□□ -0.48
HERC2-209ENST00000567869 GRIN2BQ13224 1484 aa12.04□□□□□ -0.48
HERC2-209ENST00000567869 FYCO1Q9BQS8 1478 aa12.04□□□□□ -0.48
HERC2-209ENST00000567869 MTUS2Q5JR59 1369 aa12.04□□□□□ -0.48
HERC2-209ENST00000567869 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
HERC2-209ENST00000567869 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
HERC2-209ENST00000567869 VSIG10Q8N0Z9 540 aa12.03□□□□□ -0.48
HERC2-209ENST00000567869 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
HERC2-209ENST00000567869 RAB3GAP2Q9H2M9 1393 aa12.01□□□□□ -0.49
HERC2-209ENST00000567869 SNAPC4Q5SXM2 1469 aa12.01□□□□□ -0.49
HERC2-209ENST00000567869 WDR62O43379 1518 aa12.01□□□□□ -0.49
HERC2-209ENST00000567869 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
HERC2-209ENST00000567869 AAMPQ13685 434 aa12□□□□□ -0.49
HERC2-209ENST00000567869 CFAP43Q8NDM7 1665 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms