RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 RAD54L2Q9Y4B4 1467 aa12.75□□□□□ -0.37
SIN3A-207ENST00000566640 SOGA1O94964 1423 aa12.73□□□□□ -0.37
SIN3A-207ENST00000566640 TDRD9Q8NDG6 1382 aaKnown RBP12.72□□□□□ -0.37
SIN3A-207ENST00000566640 FGD5Q6ZNL6 1462 aa12.71□□□□□ -0.38
SIN3A-207ENST00000566640 CUX1P39880 1505 aa12.7□□□□□ -0.38
SIN3A-207ENST00000566640 WDR97A6NE52 1622 aa12.68□□□□□ -0.38
SIN3A-207ENST00000566640 SNAPC4Q5SXM2 1469 aa12.67□□□□□ -0.38
SIN3A-207ENST00000566640 ARAP1Q96P48 1450 aa12.67□□□□□ -0.38
SIN3A-207ENST00000566640 FBLN2P98095 1184 aa12.67□□□□□ -0.38
SIN3A-207ENST00000566640 CHD1O14646 1710 aa12.66□□□□□ -0.38
SIN3A-207ENST00000566640 CYB5RLQ6IPT4 315 aa12.66□□□□□ -0.38
SIN3A-207ENST00000566640 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-207ENST00000566640 GRIN2BQ13224 1484 aa12.64□□□□□ -0.39
SIN3A-207ENST00000566640 CLASP1Q7Z460 1538 aa12.62□□□□□ -0.39
SIN3A-207ENST00000566640 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
SIN3A-207ENST00000566640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
SIN3A-207ENST00000566640 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
SIN3A-207ENST00000566640 SYNJ2O15056 1496 aa12.6□□□□□ -0.39
SIN3A-207ENST00000566640 CHMP7Q8WUX9 453 aaPredicted RBP12.6□□□□□ -0.39
SIN3A-207ENST00000566640 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
SIN3A-207ENST00000566640 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.4
SIN3A-207ENST00000566640 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
SIN3A-207ENST00000566640 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
SIN3A-207ENST00000566640 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
SIN3A-207ENST00000566640 SP7Q8TDD2 431 aaPredicted RBP12.53□□□□□ -0.4
SIN3A-207ENST00000566640 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
SIN3A-207ENST00000566640 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
SIN3A-207ENST00000566640 WRNQ14191 1432 aaPredicted RBP eCLIP12.51□□□□□ -0.41
SIN3A-207ENST00000566640 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
SIN3A-207ENST00000566640 ABCB7O75027 752 aa12.49□□□□□ -0.41
SIN3A-207ENST00000566640 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
SIN3A-207ENST00000566640 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
SIN3A-207ENST00000566640 NUP160Q12769 1436 aa12.47□□□□□ -0.41
SIN3A-207ENST00000566640 TOP2BQ02880 1626 aa12.47□□□□□ -0.41
SIN3A-207ENST00000566640 APLP2Q06481 763 aa12.46□□□□□ -0.41
SIN3A-207ENST00000566640 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
SIN3A-207ENST00000566640 ADAMTS12P58397 1594 aa12.45□□□□□ -0.42
SIN3A-207ENST00000566640 FHAD1B1AJZ9 1412 aa12.44□□□□□ -0.42
SIN3A-207ENST00000566640 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
SIN3A-207ENST00000566640 CEP170Q5SW79 1584 aa12.42□□□□□ -0.42
SIN3A-207ENST00000566640 ERCC6L2Q5T890 1561 aa12.41□□□□□ -0.42
SIN3A-207ENST00000566640 ERICH3Q5RHP9 1530 aa12.41□□□□□ -0.42
SIN3A-207ENST00000566640 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
SIN3A-207ENST00000566640 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
SIN3A-207ENST00000566640 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
SIN3A-207ENST00000566640 JPH4Q96JJ6 628 aa12.31□□□□□ -0.44
SIN3A-207ENST00000566640 PRG4Q92954 1404 aaPredicted RBP12.3□□□□□ -0.44
SIN3A-207ENST00000566640 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.44
SIN3A-207ENST00000566640 IGF1RP08069 1367 aa12.27□□□□□ -0.45
SIN3A-207ENST00000566640 KIF27Q86VH2 1401 aa12.24□□□□□ -0.45
SIN3A-207ENST00000566640 KIAA0586Q9BVV6 1533 aa12.23□□□□□ -0.45
SIN3A-207ENST00000566640 ABCC10Q5T3U5 1492 aa12.19□□□□□ -0.46
SIN3A-207ENST00000566640 MAPKBP1O60336 1514 aa12.18□□□□□ -0.46
SIN3A-207ENST00000566640 CUL7Q14999 1698 aa12.17□□□□□ -0.46
SIN3A-207ENST00000566640 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
SIN3A-207ENST00000566640 ADCY10Q96PN6 1610 aa12.16□□□□□ -0.46
SIN3A-207ENST00000566640 FAM69CQ0P6D2 419 aa12.14□□□□□ -0.47
SIN3A-207ENST00000566640 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
SIN3A-207ENST00000566640 KIF13AQ9H1H9 1805 aa12.13□□□□□ -0.47
SIN3A-207ENST00000566640 DIP2BQ9P265 1576 aa12.12□□□□□ -0.47
SIN3A-207ENST00000566640 PTPRGP23470 1445 aa12.11□□□□□ -0.47
SIN3A-207ENST00000566640 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
SIN3A-207ENST00000566640 POLA2Q14181 598 aa12.07□□□□□ -0.48
SIN3A-207ENST00000566640 CARMIL2Q6F5E8 1435 aa12.07□□□□□ -0.48
SIN3A-207ENST00000566640 ABCC2Q92887 1545 aa12.06□□□□□ -0.48
SIN3A-207ENST00000566640 IQGAP2Q13576 1575 aa12.06□□□□□ -0.48
SIN3A-207ENST00000566640 DISP1Q96F81 1524 aa12.06□□□□□ -0.48
SIN3A-207ENST00000566640 UHRF1BP1LA0JNW5 1464 aa12.05□□□□□ -0.48
SIN3A-207ENST00000566640 RAPGEF2Q9Y4G8 1499 aa12.04□□□□□ -0.48
SIN3A-207ENST00000566640 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
SIN3A-207ENST00000566640 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
SIN3A-207ENST00000566640 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
SIN3A-207ENST00000566640 UGGT2Q9NYU1 1516 aa12.02□□□□□ -0.48
SIN3A-207ENST00000566640 HAX1O00165 279 aa12.02□□□□□ -0.49
SIN3A-207ENST00000566640 PLB1Q6P1J6 1458 aa12.01□□□□□ -0.49
SIN3A-207ENST00000566640 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
SIN3A-207ENST00000566640 KDM5BQ9UGL1 1544 aa12□□□□□ -0.49
SIN3A-207ENST00000566640 GLI2P10070 1586 aa11.99□□□□□ -0.49
SIN3A-207ENST00000566640 KDM6BO15054 1643 aa11.99□□□□□ -0.49
SIN3A-207ENST00000566640 KIAA0556O60303 1618 aa11.97□□□□□ -0.49
SIN3A-207ENST00000566640 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
SIN3A-207ENST00000566640 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.5
SIN3A-207ENST00000566640 PRXQ9BXM0 1461 aa11.95□□□□□ -0.5
SIN3A-207ENST00000566640 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
SIN3A-207ENST00000566640 COL17A1Q9UMD9 1497 aaPredicted RBP11.93□□□□□ -0.5
SIN3A-207ENST00000566640 PPRC1Q5VV67 1664 aaKnown RBP11.93□□□□□ -0.5
SIN3A-207ENST00000566640 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
SIN3A-207ENST00000566640 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
SIN3A-207ENST00000566640 MAP3K4Q9Y6R4 1608 aa11.89□□□□□ -0.51
SIN3A-207ENST00000566640 GOLGA3Q08378 1498 aa11.89□□□□□ -0.51
SIN3A-207ENST00000566640 WDR7Q9Y4E6 1490 aa11.89□□□□□ -0.51
SIN3A-207ENST00000566640 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
SIN3A-207ENST00000566640 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
SIN3A-207ENST00000566640 ABCA8O94911 1581 aa11.88□□□□□ -0.51
SIN3A-207ENST00000566640 EVX2Q03828 476 aa11.88□□□□□ -0.51
SIN3A-207ENST00000566640 TEX14Q8IWB6 1497 aa11.87□□□□□ -0.51
SIN3A-207ENST00000566640 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
SIN3A-207ENST00000566640 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
SIN3A-207ENST00000566640 FKBP8Q14318 412 aa11.84□□□□□ -0.51
SIN3A-207ENST00000566640 MAGI3Q5TCQ9 1506 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms