RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KDM6BO15054 1643 aa16.55■□□□□ 0.24
VPS9D1-205ENST00000565452 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
VPS9D1-205ENST00000565452 ADAMTS12P58397 1594 aa16.5■□□□□ 0.23
VPS9D1-205ENST00000565452 DIP2BQ9P265 1576 aa16.48■□□□□ 0.23
VPS9D1-205ENST00000565452 FBXO41Q8TF61 875 aa16.48■□□□□ 0.23
VPS9D1-205ENST00000565452 ADGRL1O94910 1474 aa16.44■□□□□ 0.22
VPS9D1-205ENST00000565452 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
VPS9D1-205ENST00000565452 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
VPS9D1-205ENST00000565452 TSPOAP1O95153 1857 aa16.37■□□□□ 0.21
VPS9D1-205ENST00000565452 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
VPS9D1-205ENST00000565452 PTPRGP23470 1445 aa16.36■□□□□ 0.21
VPS9D1-205ENST00000565452 HECW2Q9P2P5 1572 aa16.36■□□□□ 0.21
VPS9D1-205ENST00000565452 PLB1Q6P1J6 1458 aa16.32■□□□□ 0.2
VPS9D1-205ENST00000565452 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
VPS9D1-205ENST00000565452 ASXL2Q76L83 1435 aa16.29■□□□□ 0.2
VPS9D1-205ENST00000565452 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
VPS9D1-205ENST00000565452 TOP2BQ02880 1626 aa16.27■□□□□ 0.19
VPS9D1-205ENST00000565452 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
VPS9D1-205ENST00000565452 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
VPS9D1-205ENST00000565452 ABCC2Q92887 1545 aa16.25■□□□□ 0.19
VPS9D1-205ENST00000565452 GLI2P10070 1586 aa16.25■□□□□ 0.19
VPS9D1-205ENST00000565452 CARMIL2Q6F5E8 1435 aa16.23■□□□□ 0.19
VPS9D1-205ENST00000565452 TEX14Q8IWB6 1497 aa16.22■□□□□ 0.19
VPS9D1-205ENST00000565452 IGF1RP08069 1367 aa16.21■□□□□ 0.19
VPS9D1-205ENST00000565452 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
VPS9D1-205ENST00000565452 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
VPS9D1-205ENST00000565452 UACAQ9BZF9 1416 aa16.17■□□□□ 0.18
VPS9D1-205ENST00000565452 EPRSP07814 1512 aaKnown RBP16.16■□□□□ 0.18
VPS9D1-205ENST00000565452 UHRF1BP1LA0JNW5 1464 aa16.16■□□□□ 0.18
VPS9D1-205ENST00000565452 LMTK3Q96Q04 1460 aa16.15■□□□□ 0.18
VPS9D1-205ENST00000565452 PPRC1Q5VV67 1664 aaKnown RBP16.14■□□□□ 0.18
VPS9D1-205ENST00000565452 KIF27Q86VH2 1401 aa16.1■□□□□ 0.17
VPS9D1-205ENST00000565452 SOCS7O14512 581 aa16.08■□□□□ 0.16
VPS9D1-205ENST00000565452 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
VPS9D1-205ENST00000565452 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
VPS9D1-205ENST00000565452 KDM5BQ9UGL1 1544 aa16.07■□□□□ 0.16
VPS9D1-205ENST00000565452 MAP3K4Q9Y6R4 1608 aa16.05■□□□□ 0.16
VPS9D1-205ENST00000565452 CD109Q6YHK3 1445 aa16.05■□□□□ 0.16
VPS9D1-205ENST00000565452 CUL7Q14999 1698 aa16.02■□□□□ 0.15
VPS9D1-205ENST00000565452 MAGI3Q5TCQ9 1506 aa16■□□□□ 0.15
VPS9D1-205ENST00000565452 CERKQ8TCT0 537 aa16■□□□□ 0.15
VPS9D1-205ENST00000565452 PTPRMP28827 1452 aa15.99■□□□□ 0.15
VPS9D1-205ENST00000565452 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
VPS9D1-205ENST00000565452 ILDR2Q71H61 639 aa15.99■□□□□ 0.15
VPS9D1-205ENST00000565452 DISP3Q9P2K9 1392 aa15.99■□□□□ 0.15
VPS9D1-205ENST00000565452 ARID4BQ4LE39 1312 aaPredicted RBP15.96■□□□□ 0.15
VPS9D1-205ENST00000565452 DISP1Q96F81 1524 aa15.96■□□□□ 0.15
VPS9D1-205ENST00000565452 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-205ENST00000565452 IQGAP2Q13576 1575 aa15.94■□□□□ 0.14
VPS9D1-205ENST00000565452 PHLDB1Q86UU1 1377 aa15.92■□□□□ 0.14
VPS9D1-205ENST00000565452 ZCCHC11Q5TAX3 1644 aaKnown RBP15.91■□□□□ 0.14
VPS9D1-205ENST00000565452 HSPA2P54652 639 aa15.9■□□□□ 0.14
VPS9D1-205ENST00000565452 ARAP3Q8WWN8 1544 aa15.89■□□□□ 0.13
VPS9D1-205ENST00000565452 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
VPS9D1-205ENST00000565452 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-205ENST00000565452 KIF21BO75037 1637 aa15.86■□□□□ 0.13
VPS9D1-205ENST00000565452 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
VPS9D1-205ENST00000565452 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
VPS9D1-205ENST00000565452 PLPPR3Q6T4P5 718 aa15.84■□□□□ 0.13
VPS9D1-205ENST00000565452 ADAMTSL3P82987 1691 aa15.83■□□□□ 0.13
VPS9D1-205ENST00000565452 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
VPS9D1-205ENST00000565452 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
VPS9D1-205ENST00000565452 KIAA0556O60303 1618 aa15.78■□□□□ 0.12
VPS9D1-205ENST00000565452 ARID3CA6NKF2 412 aa15.77■□□□□ 0.12
VPS9D1-205ENST00000565452 GOLGA3Q08378 1498 aa15.76■□□□□ 0.11
VPS9D1-205ENST00000565452 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
VPS9D1-205ENST00000565452 NEO1Q92859 1461 aa15.72■□□□□ 0.11
VPS9D1-205ENST00000565452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-205ENST00000565452 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-205ENST00000565452 MADDQ8WXG6 1647 aa15.72■□□□□ 0.11
VPS9D1-205ENST00000565452 BCORL1Q5H9F3 1711 aa15.71■□□□□ 0.11
VPS9D1-205ENST00000565452 ABCA8O94911 1581 aa15.71■□□□□ 0.11
VPS9D1-205ENST00000565452 MLECQ14165 292 aa15.69■□□□□ 0.1
VPS9D1-205ENST00000565452 ATP10BO94823 1461 aa15.69■□□□□ 0.1
VPS9D1-205ENST00000565452 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
VPS9D1-205ENST00000565452 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
VPS9D1-205ENST00000565452 AKNAQ7Z591 1439 aa15.65■□□□□ 0.1
VPS9D1-205ENST00000565452 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
VPS9D1-205ENST00000565452 RIMS1Q86UR5 1692 aaKnown RBP15.63■□□□□ 0.09
VPS9D1-205ENST00000565452 PLEKHD1A6NEE1 506 aa15.62■□□□□ 0.09
VPS9D1-205ENST00000565452 FANCAO15360 1455 aa15.62■□□□□ 0.09
VPS9D1-205ENST00000565452 ABCA9Q8IUA7 1624 aa15.61■□□□□ 0.09
VPS9D1-205ENST00000565452 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
VPS9D1-205ENST00000565452 CEBPAP49715 358 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-205ENST00000565452 SPATA31D1Q6ZQQ2 1576 aa15.59■□□□□ 0.09
VPS9D1-205ENST00000565452 FRMPD1Q5SYB0 1578 aa15.55■□□□□ 0.08
VPS9D1-205ENST00000565452 MAGI2Q86UL8 1455 aa15.54■□□□□ 0.08
VPS9D1-205ENST00000565452 ARHGEF40Q8TER5 1519 aa15.53■□□□□ 0.08
VPS9D1-205ENST00000565452 PTPRTO14522 1441 aa15.53■□□□□ 0.08
VPS9D1-205ENST00000565452 UHRF1BP1Q6BDS2 1440 aa15.51■□□□□ 0.07
VPS9D1-205ENST00000565452 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
VPS9D1-205ENST00000565452 ZFYVE16Q7Z3T8 1539 aa15.48■□□□□ 0.07
VPS9D1-205ENST00000565452 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
VPS9D1-205ENST00000565452 ESF1Q9H501 851 aaKnown RBP15.48■□□□□ 0.07
VPS9D1-205ENST00000565452 ATP10AO60312 1499 aa15.47■□□□□ 0.07
VPS9D1-205ENST00000565452 IQSEC2Q5JU85 1478 aa15.46■□□□□ 0.07
VPS9D1-205ENST00000565452 TTC37Q6PGP7 1564 aa15.46■□□□□ 0.07
VPS9D1-205ENST00000565452 SCAPERQ9BY12 1400 aa15.46■□□□□ 0.07
VPS9D1-205ENST00000565452 CTTNBP2Q8WZ74 1663 aa15.45■□□□□ 0.06
VPS9D1-205ENST00000565452 MYT1LQ9UL68 1186 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms