RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
DENND4A-206ENST00000564674 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
DENND4A-206ENST00000564674 PPP1R15AO75807 674 aaPredicted RBP25.93■■□□□ 1.74
DENND4A-206ENST00000564674 CNGB1Q14028 1251 aaPredicted RBP25.91■■□□□ 1.74
DENND4A-206ENST00000564674 PHLDB1Q86UU1 1377 aa25.89■■□□□ 1.74
DENND4A-206ENST00000564674 HNRNPUQ00839 825 aaKnown RBP eCLIP25.89■■□□□ 1.73
DENND4A-206ENST00000564674 MAPKBP1O60336 1514 aa25.88■■□□□ 1.73
DENND4A-206ENST00000564674 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
DENND4A-206ENST00000564674 CUX1P39880 1505 aa25.83■■□□□ 1.72
DENND4A-206ENST00000564674 ERICH3Q5RHP9 1530 aa25.82■■□□□ 1.72
DENND4A-206ENST00000564674 CUX2O14529 1486 aa25.78■■□□□ 1.72
DENND4A-206ENST00000564674 TONSLQ96HA7 1378 aa25.76■■□□□ 1.72
DENND4A-206ENST00000564674 ERICH6Q7L0X2 663 aa25.76■■□□□ 1.72
DENND4A-206ENST00000564674 MSH5O43196 834 aa25.76■■□□□ 1.71
DENND4A-206ENST00000564674 SENP3-EIF4A1A0A087X0R7 540 aa25.74■■□□□ 1.71
DENND4A-206ENST00000564674 IGF1RP08069 1367 aa25.72■■□□□ 1.71
DENND4A-206ENST00000564674 CARMIL1Q5VZK9 1371 aa25.71■■□□□ 1.71
DENND4A-206ENST00000564674 CHIC2Q9UKJ5 165 aa25.69■■□□□ 1.7
DENND4A-206ENST00000564674 CCER2I3L3R5 266 aa25.68■■□□□ 1.7
DENND4A-206ENST00000564674 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
DENND4A-206ENST00000564674 CDK11AQ9UQ88 783 aaPredicted RBP25.66■■□□□ 1.7
DENND4A-206ENST00000564674 LRRC9Q6ZRR7 1453 aa25.65■■□□□ 1.7
DENND4A-206ENST00000564674 FAM9BQ8IZU0 186 aa25.65■■□□□ 1.7
DENND4A-206ENST00000564674 ARID3CA6NKF2 412 aa25.64■■□□□ 1.7
DENND4A-206ENST00000564674 BIVM-ERCC5R4GMW8 1640 aa25.63■■□□□ 1.69
DENND4A-206ENST00000564674 FHOD3Q2V2M9 1422 aa25.63■■□□□ 1.69
DENND4A-206ENST00000564674 RRP7BPQ9NSQ0 103 aa25.61■■□□□ 1.69
DENND4A-206ENST00000564674 CCDC184Q52MB2 194 aa25.59■■□□□ 1.69
DENND4A-206ENST00000564674 TIAM1Q13009 1591 aa25.59■■□□□ 1.69
DENND4A-206ENST00000564674 B4GALNT3Q6L9W6 998 aa25.56■■□□□ 1.68
DENND4A-206ENST00000564674 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
DENND4A-206ENST00000564674 FOXD1Q16676 465 aa25.53■■□□□ 1.68
DENND4A-206ENST00000564674 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
DENND4A-206ENST00000564674 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
DENND4A-206ENST00000564674 MTUS2Q5JR59 1369 aa25.47■■□□□ 1.67
DENND4A-206ENST00000564674 FHAD1B1AJZ9 1412 aa25.44■■□□□ 1.66
DENND4A-206ENST00000564674 WASHC2AQ641Q2 1341 aa25.43■■□□□ 1.66
DENND4A-206ENST00000564674 MRS2Q9HD23 443 aa25.42■■□□□ 1.66
DENND4A-206ENST00000564674 CFTRP13569 1480 aa25.42■■□□□ 1.66
DENND4A-206ENST00000564674 NBR1Q14596 966 aa25.41■■□□□ 1.66
DENND4A-206ENST00000564674 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.66
DENND4A-206ENST00000564674 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
DENND4A-206ENST00000564674 CCDC18Q5T9S5 1454 aa25.38■■□□□ 1.65
DENND4A-206ENST00000564674 PTPRKQ15262 1439 aa25.37■■□□□ 1.65
DENND4A-206ENST00000564674 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
DENND4A-206ENST00000564674 C11orf95C9JLR9 678 aaPredicted RBP25.35■■□□□ 1.65
DENND4A-206ENST00000564674 EIF4G2P78344 907 aaKnown RBP eCLIP25.34■■□□□ 1.65
DENND4A-206ENST00000564674 RAD54L2Q9Y4B4 1467 aa25.33■■□□□ 1.65
DENND4A-206ENST00000564674 AQRO60306 1485 aaKnown RBP eCLIP25.32■■□□□ 1.64
DENND4A-206ENST00000564674 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
DENND4A-206ENST00000564674 PPP4R2Q9NY27 417 aa25.32■■□□□ 1.64
DENND4A-206ENST00000564674 FGD6Q6ZV73 1430 aa25.31■■□□□ 1.64
DENND4A-206ENST00000564674 L3MBTL2Q969R5 705 aa25.28■■□□□ 1.64
DENND4A-206ENST00000564674 FANCIQ9NVI1 1328 aa25.27■■□□□ 1.64
DENND4A-206ENST00000564674 CADPSQ9ULU8 1353 aa25.24■■□□□ 1.63
DENND4A-206ENST00000564674 MAP3K1Q13233 1512 aa25.22■■□□□ 1.63
DENND4A-206ENST00000564674 UACAQ9BZF9 1416 aa25.22■■□□□ 1.63
DENND4A-206ENST00000564674 PRKRIP1Q9H875 184 aaPredicted RBP25.21■■□□□ 1.63
DENND4A-206ENST00000564674 DEKP35659 375 aaKnown RBP25.2■■□□□ 1.62
DENND4A-206ENST00000564674 PAK3O75914 559 aaPredicted RBP25.18■■□□□ 1.62
DENND4A-206ENST00000564674 NAIPQ13075 1403 aa25.18■■□□□ 1.62
DENND4A-206ENST00000564674 MPHOSPH9Q99550 1183 aa25.16■■□□□ 1.62
DENND4A-206ENST00000564674 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
DENND4A-206ENST00000564674 SALL2Q9Y467 1007 aaPredicted RBP25.16■■□□□ 1.62
DENND4A-206ENST00000564674 CASKIN1Q8WXD9 1431 aa25.15■■□□□ 1.62
DENND4A-206ENST00000564674 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
DENND4A-206ENST00000564674 HFM1A2PYH4 1435 aa25.13■■□□□ 1.61
DENND4A-206ENST00000564674 NBPF8Q3BBV2 869 aa25.13■■□□□ 1.61
DENND4A-206ENST00000564674 FMN1Q68DA7 1419 aa25.1■■□□□ 1.61
DENND4A-206ENST00000564674 CCDC136Q96JN2 1154 aa25.1■■□□□ 1.61
DENND4A-206ENST00000564674 FYCO1Q9BQS8 1478 aa25.1■■□□□ 1.61
DENND4A-206ENST00000564674 NPM2Q86SE8 214 aaKnown RBP25.09■■□□□ 1.61
DENND4A-206ENST00000564674 NCOA2Q15596 1464 aa25.08■■□□□ 1.61
DENND4A-206ENST00000564674 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
DENND4A-206ENST00000564674 NOP58Q9Y2X3 529 aaKnown RBP25.07■■□□□ 1.6
DENND4A-206ENST00000564674 AKNAQ7Z591 1439 aa25.05■■□□□ 1.6
DENND4A-206ENST00000564674 CFAP43Q8NDM7 1665 aa25.04■■□□□ 1.6
DENND4A-206ENST00000564674 PTPN23Q9H3S7 1636 aa25.04■■□□□ 1.6
DENND4A-206ENST00000564674 SLC4A1APQ9BWU0 796 aaKnown RBP25.04■■□□□ 1.6
DENND4A-206ENST00000564674 CCDC7Q96M83 1385 aa25.04■■□□□ 1.6
DENND4A-206ENST00000564674 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
DENND4A-206ENST00000564674 MYOM3Q5VTT5 1437 aa25.03■■□□□ 1.6
DENND4A-206ENST00000564674 CNTLNQ9NXG0 1405 aa25.03■■□□□ 1.6
DENND4A-206ENST00000564674 KIF7Q2M1P5 1343 aa25.02■■□□□ 1.6
DENND4A-206ENST00000564674 ZBED9Q6R2W3 1325 aa25■■□□□ 1.59
DENND4A-206ENST00000564674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25■■□□□ 1.596e-7■■■■■ 31.9
DENND4A-206ENST00000564674 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
DENND4A-206ENST00000564674 NESP48681 1621 aa24.97■■□□□ 1.59
DENND4A-206ENST00000564674 ZNF777Q9ULD5 760 aaPredicted RBP24.95■■□□□ 1.58
DENND4A-206ENST00000564674 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
DENND4A-206ENST00000564674 KDM5BQ9UGL1 1544 aa24.94■■□□□ 1.58
DENND4A-206ENST00000564674 ANP32AP39687 249 aaKnown RBP24.93■■□□□ 1.58
DENND4A-206ENST00000564674 ERICH6BQ5W0A0 696 aa24.93■■□□□ 1.58
DENND4A-206ENST00000564674 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
DENND4A-206ENST00000564674 KDM2AQ9Y2K7 1162 aa24.9■■□□□ 1.58
DENND4A-206ENST00000564674 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.58
DENND4A-206ENST00000564674 ZBTB47Q9UFB7 747 aaPredicted RBP24.89■■□□□ 1.58
DENND4A-206ENST00000564674 RTL5Q5HYW3 569 aaPredicted RBP24.89■■□□□ 1.57
DENND4A-206ENST00000564674 RTN4Q9NQC3 1192 aaKnown RBP24.87■■□□□ 1.57
DENND4A-206ENST00000564674 DENND4BO75064 1496 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms