RNA–Protein interactions for RNA: ENST00000562617.1

AC104640.1-201, humanhuman

BASIC

Gene AC104640.1, Length 2,109 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104640.1-201ENST00000562617 TIMELESSQ9UNS1 1208 aa22.9■■□□□ 1.26
AC104640.1-201ENST00000562617 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
AC104640.1-201ENST00000562617 IGF1RP08069 1367 aa22.86■■□□□ 1.25
AC104640.1-201ENST00000562617 FHAD1B1AJZ9 1412 aa22.85■■□□□ 1.25
AC104640.1-201ENST00000562617 WDR97A6NE52 1622 aa22.84■■□□□ 1.25
AC104640.1-201ENST00000562617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.81■■□□□ 1.24
AC104640.1-201ENST00000562617 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
AC104640.1-201ENST00000562617 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
AC104640.1-201ENST00000562617 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
AC104640.1-201ENST00000562617 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
AC104640.1-201ENST00000562617 ANP32EQ9BTT0 268 aa22.75■■□□□ 1.23
AC104640.1-201ENST00000562617 ITGAEP38570 1179 aa22.74■■□□□ 1.23
AC104640.1-201ENST00000562617 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
AC104640.1-201ENST00000562617 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
AC104640.1-201ENST00000562617 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
AC104640.1-201ENST00000562617 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.23
AC104640.1-201ENST00000562617 FYCO1Q9BQS8 1478 aa22.72■■□□□ 1.23
AC104640.1-201ENST00000562617 EFCAB5A4FU69 1503 aa22.71■■□□□ 1.23
AC104640.1-201ENST00000562617 NESP48681 1621 aa22.69■■□□□ 1.22
AC104640.1-201ENST00000562617 FANCD2Q9BXW9 1451 aa22.68■■□□□ 1.22
AC104640.1-201ENST00000562617 DDX10Q13206 875 aaKnown RBP22.64■■□□□ 1.21
AC104640.1-201ENST00000562617 CASKIN1Q8WXD9 1431 aa22.63■■□□□ 1.21
AC104640.1-201ENST00000562617 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
AC104640.1-201ENST00000562617 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
AC104640.1-201ENST00000562617 LAMC3Q9Y6N6 1575 aa22.6■■□□□ 1.21
AC104640.1-201ENST00000562617 FKBP8Q14318 412 aa22.59■■□□□ 1.21
AC104640.1-201ENST00000562617 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.2
AC104640.1-201ENST00000562617 CUL7Q14999 1698 aa22.57■■□□□ 1.2
AC104640.1-201ENST00000562617 CTTNBP2Q8WZ74 1663 aa22.57■■□□□ 1.2
AC104640.1-201ENST00000562617 NEFLP07196 543 aa22.57■■□□□ 1.2
AC104640.1-201ENST00000562617 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
AC104640.1-201ENST00000562617 ANP32CO43423 234 aa22.55■■□□□ 1.2
AC104640.1-201ENST00000562617 ERCC6Q03468 1493 aa22.55■■□□□ 1.2
AC104640.1-201ENST00000562617 TOPBP1Q92547 1522 aa22.54■■□□□ 1.2
AC104640.1-201ENST00000562617 FGD6Q6ZV73 1430 aa22.53■■□□□ 1.2
AC104640.1-201ENST00000562617 HFM1A2PYH4 1435 aa22.52■■□□□ 1.2
AC104640.1-201ENST00000562617 UACAQ9BZF9 1416 aa22.52■■□□□ 1.19
AC104640.1-201ENST00000562617 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
AC104640.1-201ENST00000562617 FHOD3Q2V2M9 1422 aa22.5■■□□□ 1.19
AC104640.1-201ENST00000562617 CCDC18Q5T9S5 1454 aa22.5■■□□□ 1.19
AC104640.1-201ENST00000562617 FMN1Q68DA7 1419 aa22.49■■□□□ 1.19
AC104640.1-201ENST00000562617 RAD54L2Q9Y4B4 1467 aa22.49■■□□□ 1.19
AC104640.1-201ENST00000562617 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
AC104640.1-201ENST00000562617 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
AC104640.1-201ENST00000562617 TONSLQ96HA7 1378 aa22.47■■□□□ 1.19
AC104640.1-201ENST00000562617 BCANQ96GW7 911 aa22.47■■□□□ 1.19
AC104640.1-201ENST00000562617 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.19
AC104640.1-201ENST00000562617 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
AC104640.1-201ENST00000562617 RBM19Q9Y4C8 960 aaKnown RBP22.42■■□□□ 1.18
AC104640.1-201ENST00000562617 KDM5BQ9UGL1 1544 aa22.42■■□□□ 1.18
AC104640.1-201ENST00000562617 SAMD9Q5K651 1589 aa22.41■■□□□ 1.18
AC104640.1-201ENST00000562617 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
AC104640.1-201ENST00000562617 NAIPQ13075 1403 aa22.37■■□□□ 1.17
AC104640.1-201ENST00000562617 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
AC104640.1-201ENST00000562617 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
AC104640.1-201ENST00000562617 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
AC104640.1-201ENST00000562617 LRRIQ1Q96JM4 1722 aa22.36■■□□□ 1.17
AC104640.1-201ENST00000562617 URB2Q14146 1524 aaKnown RBP22.35■■□□□ 1.17
AC104640.1-201ENST00000562617 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
AC104640.1-201ENST00000562617 EHBP1L1Q8N3D4 1523 aa22.34■■□□□ 1.17
AC104640.1-201ENST00000562617 P3H3Q8IVL6 736 aa22.33■■□□□ 1.16
AC104640.1-201ENST00000562617 GCC2Q8IWJ2 1684 aa22.32■■□□□ 1.16
AC104640.1-201ENST00000562617 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
AC104640.1-201ENST00000562617 MTUS2Q5JR59 1369 aa22.32■■□□□ 1.16
AC104640.1-201ENST00000562617 HECW1Q76N89 1606 aa22.32■■□□□ 1.16
AC104640.1-201ENST00000562617 NCOA2Q15596 1464 aa22.32■■□□□ 1.16
AC104640.1-201ENST00000562617 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
AC104640.1-201ENST00000562617 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
AC104640.1-201ENST00000562617 ERICH6BQ5W0A0 696 aa22.3■■□□□ 1.16
AC104640.1-201ENST00000562617 HIRIP3Q9BW71 556 aaPredicted RBP22.3■■□□□ 1.16
AC104640.1-201ENST00000562617 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
AC104640.1-201ENST00000562617 ATP1B4Q9UN42 357 aaPredicted RBP22.28■■□□□ 1.16
AC104640.1-201ENST00000562617 UGGT2Q9NYU1 1516 aa22.28■■□□□ 1.16
AC104640.1-201ENST00000562617 TCOF1Q13428 1488 aaKnown RBP22.26■■□□□ 1.15
AC104640.1-201ENST00000562617 FANCIQ9NVI1 1328 aa22.25■■□□□ 1.15
AC104640.1-201ENST00000562617 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
AC104640.1-201ENST00000562617 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
AC104640.1-201ENST00000562617 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
AC104640.1-201ENST00000562617 BCL11AQ9H165 835 aa22.18■■□□□ 1.14
AC104640.1-201ENST00000562617 CNTLNQ9NXG0 1405 aa22.18■■□□□ 1.14
AC104640.1-201ENST00000562617 DENND4BO75064 1496 aaPredicted RBP22.17■■□□□ 1.14
AC104640.1-201ENST00000562617 HNRNPUQ00839 825 aaKnown RBP eCLIP22.16■■□□□ 1.14
AC104640.1-201ENST00000562617 WASHC2AQ641Q2 1341 aa22.16■■□□□ 1.14
AC104640.1-201ENST00000562617 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
AC104640.1-201ENST00000562617 WDR62O43379 1518 aa22.13■■□□□ 1.13
AC104640.1-201ENST00000562617 POLR1AO95602 1720 aaPredicted RBP22.13■■□□□ 1.13
AC104640.1-201ENST00000562617 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
AC104640.1-201ENST00000562617 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
AC104640.1-201ENST00000562617 MSH5O43196 834 aa22.11■■□□□ 1.13
AC104640.1-201ENST00000562617 HSPA5P11021 654 aaKnown RBP22.11■■□□□ 1.13
AC104640.1-201ENST00000562617 NCOA1Q15788 1441 aa22.1■■□□□ 1.13
AC104640.1-201ENST00000562617 MIA2Q96PC5 1412 aa22.1■■□□□ 1.13
AC104640.1-201ENST00000562617 EIF4G2P78344 907 aaKnown RBP eCLIP22.09■■□□□ 1.13
AC104640.1-201ENST00000562617 PPP4R2Q9NY27 417 aa22.07■■□□□ 1.12
AC104640.1-201ENST00000562617 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
AC104640.1-201ENST00000562617 KDM6BO15054 1643 aa22.04■■□□□ 1.12
AC104640.1-201ENST00000562617 CCDC7Q96M83 1385 aa22.03■■□□□ 1.12
AC104640.1-201ENST00000562617 ZBED9Q6R2W3 1325 aa22.02■■□□□ 1.12
AC104640.1-201ENST00000562617 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
AC104640.1-201ENST00000562617 PRKRIP1Q9H875 184 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms