RNA–Protein interactions for RNA: ENST00000562617.1

AC104640.1-201, humanhuman

BASIC

Gene AC104640.1, Length 2,109 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104640.1-201ENST00000562617 NISCHQ9Y2I1 1504 aa32.14■■■□□ 2.74
AC104640.1-201ENST00000562617 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
AC104640.1-201ENST00000562617 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
AC104640.1-201ENST00000562617 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
AC104640.1-201ENST00000562617 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
AC104640.1-201ENST00000562617 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
AC104640.1-201ENST00000562617 HRCP23327 699 aa26.69■■□□□ 1.86
AC104640.1-201ENST00000562617 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
AC104640.1-201ENST00000562617 DCAF1Q9Y4B6 1507 aa26.57■■□□□ 1.84
AC104640.1-201ENST00000562617 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
AC104640.1-201ENST00000562617 ABCC9O60706 1549 aa26.18■■□□□ 1.78
AC104640.1-201ENST00000562617 PCGF6Q9BYE7 350 aa26.17■■□□□ 1.78
AC104640.1-201ENST00000562617 PPARGC1BQ86YN6 1023 aaKnown RBP25.79■■□□□ 1.72
AC104640.1-201ENST00000562617 TRIM26Q12899 539 aaPredicted RBP25.76■■□□□ 1.71
AC104640.1-201ENST00000562617 LOC105371045A0A1W2PR82 267 aa25.72■■□□□ 1.71
AC104640.1-201ENST00000562617 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
AC104640.1-201ENST00000562617 SCRIBQ14160 1630 aa25.53■■□□□ 1.68
AC104640.1-201ENST00000562617 ZEB1P37275 1124 aaPredicted RBP25.52■■□□□ 1.68
AC104640.1-201ENST00000562617 RB1CC1Q8TDY2 1594 aa25.45■■□□□ 1.66
AC104640.1-201ENST00000562617 NACADO15069 1562 aa25.33■■□□□ 1.65
AC104640.1-201ENST00000562617 TRIM41Q8WV44 630 aa25.25■■□□□ 1.63
AC104640.1-201ENST00000562617 PELP1Q8IZL8 1130 aaKnown RBP25.1■■□□□ 1.61
AC104640.1-201ENST00000562617 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
AC104640.1-201ENST00000562617 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
AC104640.1-201ENST00000562617 EIF4G1Q04637 1599 aaKnown RBP24.88■■□□□ 1.57
AC104640.1-201ENST00000562617 FAM9AQ8IZU1 332 aaPredicted RBP24.86■■□□□ 1.57
AC104640.1-201ENST00000562617 BAZ1AQ9NRL2 1556 aaPredicted RBP24.86■■□□□ 1.57
AC104640.1-201ENST00000562617 WIZO95785 1651 aa24.82■■□□□ 1.56
AC104640.1-201ENST00000562617 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
AC104640.1-201ENST00000562617 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
AC104640.1-201ENST00000562617 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
AC104640.1-201ENST00000562617 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
AC104640.1-201ENST00000562617 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
AC104640.1-201ENST00000562617 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
AC104640.1-201ENST00000562617 ACIN1Q9UKV3 1341 aaKnown RBP24.47■■□□□ 1.51
AC104640.1-201ENST00000562617 EHMT2Q96KQ7 1210 aa24.47■■□□□ 1.51
AC104640.1-201ENST00000562617 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
AC104640.1-201ENST00000562617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.44■■□□□ 1.5
AC104640.1-201ENST00000562617 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
AC104640.1-201ENST00000562617 EEA1Q15075 1411 aa24.42■■□□□ 1.5
AC104640.1-201ENST00000562617 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
AC104640.1-201ENST00000562617 CEP162Q5TB80 1403 aa24.39■■□□□ 1.49
AC104640.1-201ENST00000562617 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
AC104640.1-201ENST00000562617 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
AC104640.1-201ENST00000562617 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
AC104640.1-201ENST00000562617 DIEXFQ68CQ4 756 aaKnown RBP24.3■■□□□ 1.48
AC104640.1-201ENST00000562617 CENPBP07199 599 aaPredicted RBP24.29■■□□□ 1.48
AC104640.1-201ENST00000562617 NEUROD1Q13562 356 aa24.29■■□□□ 1.48
AC104640.1-201ENST00000562617 SOGA1O94964 1423 aa24.2■■□□□ 1.46
AC104640.1-201ENST00000562617 GOLGA3Q08378 1498 aa24.17■■□□□ 1.46
AC104640.1-201ENST00000562617 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
AC104640.1-201ENST00000562617 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
AC104640.1-201ENST00000562617 KIF21BO75037 1637 aa24.07■■□□□ 1.44
AC104640.1-201ENST00000562617 ZNF316A6NFI3 1004 aaPredicted RBP24.05■■□□□ 1.44
AC104640.1-201ENST00000562617 MYT1Q01538 1121 aa24.05■■□□□ 1.44
AC104640.1-201ENST00000562617 PEG3Q9GZU2 1588 aa24.05■■□□□ 1.44
AC104640.1-201ENST00000562617 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
AC104640.1-201ENST00000562617 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
AC104640.1-201ENST00000562617 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
AC104640.1-201ENST00000562617 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
AC104640.1-201ENST00000562617 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
AC104640.1-201ENST00000562617 TTBK1Q5TCY1 1321 aaPredicted RBP23.87■■□□□ 1.41
AC104640.1-201ENST00000562617 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
AC104640.1-201ENST00000562617 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
AC104640.1-201ENST00000562617 CLIP1P30622 1438 aa23.83■■□□□ 1.41
AC104640.1-201ENST00000562617 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
AC104640.1-201ENST00000562617 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
AC104640.1-201ENST00000562617 MIER1Q8N108 512 aa23.66■■□□□ 1.38
AC104640.1-201ENST00000562617 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
AC104640.1-201ENST00000562617 RAPGEF2Q9Y4G8 1499 aa23.64■■□□□ 1.37
AC104640.1-201ENST00000562617 TOP2BQ02880 1626 aa23.63■■□□□ 1.37
AC104640.1-201ENST00000562617 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
AC104640.1-201ENST00000562617 ERICH3Q5RHP9 1530 aa23.61■■□□□ 1.37
AC104640.1-201ENST00000562617 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
AC104640.1-201ENST00000562617 APLP2Q06481 763 aa23.58■■□□□ 1.37
AC104640.1-201ENST00000562617 YTHDC1Q96MU7 727 aaKnown RBP23.56■■□□□ 1.36
AC104640.1-201ENST00000562617 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
AC104640.1-201ENST00000562617 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
AC104640.1-201ENST00000562617 CUX2O14529 1486 aa23.45■■□□□ 1.34
AC104640.1-201ENST00000562617 ARAP1Q96P48 1450 aa23.44■■□□□ 1.34
AC104640.1-201ENST00000562617 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
AC104640.1-201ENST00000562617 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
AC104640.1-201ENST00000562617 NCAPD3P42695 1498 aa23.39■■□□□ 1.33
AC104640.1-201ENST00000562617 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
AC104640.1-201ENST00000562617 CUX1P39880 1505 aa23.2■■□□□ 1.3
AC104640.1-201ENST00000562617 KANK4Q5T7N3 995 aaPredicted RBP23.19■■□□□ 1.3
AC104640.1-201ENST00000562617 CCNB3Q8WWL7 1395 aa23.19■■□□□ 1.3
AC104640.1-201ENST00000562617 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
AC104640.1-201ENST00000562617 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
AC104640.1-201ENST00000562617 CFTRP13569 1480 aa23.17■■□□□ 1.3
AC104640.1-201ENST00000562617 ARHGAP35Q9NRY4 1499 aa23.15■■□□□ 1.3
AC104640.1-201ENST00000562617 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
AC104640.1-201ENST00000562617 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
AC104640.1-201ENST00000562617 MAPKBP1O60336 1514 aa23.07■■□□□ 1.28
AC104640.1-201ENST00000562617 TIAM1Q13009 1591 aa23.06■■□□□ 1.28
AC104640.1-201ENST00000562617 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
AC104640.1-201ENST00000562617 CFAP43Q8NDM7 1665 aa22.94■■□□□ 1.26
AC104640.1-201ENST00000562617 SETD5Q9C0A6 1442 aa22.94■■□□□ 1.26
AC104640.1-201ENST00000562617 LRRC9Q6ZRR7 1453 aa22.92■■□□□ 1.26
AC104640.1-201ENST00000562617 TSHZ2Q9NRE2 1034 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms