RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
FANCA-209ENST00000562424 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
FANCA-209ENST00000562424 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
FANCA-209ENST00000562424 NUP160Q12769 1436 aa19.77■□□□□ 0.76
FANCA-209ENST00000562424 CEP170Q5SW79 1584 aa19.77■□□□□ 0.76
FANCA-209ENST00000562424 IGF1RP08069 1367 aa19.73■□□□□ 0.75
FANCA-209ENST00000562424 CUL7Q14999 1698 aa19.72■□□□□ 0.75
FANCA-209ENST00000562424 PPP4R3CPQ6ZMV5 832 aa19.72■□□□□ 0.75
FANCA-209ENST00000562424 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
FANCA-209ENST00000562424 RUSC2Q8N2Y8 1516 aa19.62■□□□□ 0.73
FANCA-209ENST00000562424 CARMIL1Q5VZK9 1371 aa19.61■□□□□ 0.73
FANCA-209ENST00000562424 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
FANCA-209ENST00000562424 KIAA0586Q9BVV6 1533 aa19.55■□□□□ 0.72
FANCA-209ENST00000562424 JPH4Q96JJ6 628 aa19.54■□□□□ 0.72
FANCA-209ENST00000562424 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.72
FANCA-209ENST00000562424 KCNA4P22459 653 aa19.51■□□□□ 0.71
FANCA-209ENST00000562424 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
FANCA-209ENST00000562424 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
FANCA-209ENST00000562424 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
FANCA-209ENST00000562424 PRXQ9BXM0 1461 aa19.39■□□□□ 0.69
FANCA-209ENST00000562424 CTTNBP2Q8WZ74 1663 aa19.36■□□□□ 0.69
FANCA-209ENST00000562424 EEA1Q15075 1411 aa19.34■□□□□ 0.69
FANCA-209ENST00000562424 CARMIL2Q6F5E8 1435 aa19.33■□□□□ 0.68
FANCA-209ENST00000562424 UGGT2Q9NYU1 1516 aa19.32■□□□□ 0.68
FANCA-209ENST00000562424 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
FANCA-209ENST00000562424 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
FANCA-209ENST00000562424 DISP1Q96F81 1524 aa19.3■□□□□ 0.68
FANCA-209ENST00000562424 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
FANCA-209ENST00000562424 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
FANCA-209ENST00000562424 PTPRGP23470 1445 aa19.27■□□□□ 0.68
FANCA-209ENST00000562424 KIAA0556O60303 1618 aa19.25■□□□□ 0.67
FANCA-209ENST00000562424 KIF13AQ9H1H9 1805 aa19.21■□□□□ 0.67
FANCA-209ENST00000562424 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
FANCA-209ENST00000562424 FAM69CQ0P6D2 419 aa19.19■□□□□ 0.66
FANCA-209ENST00000562424 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
FANCA-209ENST00000562424 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
FANCA-209ENST00000562424 TTBK1Q5TCY1 1321 aaPredicted RBP19.19■□□□□ 0.66
FANCA-209ENST00000562424 MAPKBP1O60336 1514 aa19.18■□□□□ 0.66
FANCA-209ENST00000562424 KIF21BO75037 1637 aa19.17■□□□□ 0.66
FANCA-209ENST00000562424 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
FANCA-209ENST00000562424 MAPK8IP2Q13387 824 aaPredicted RBP19.16■□□□□ 0.66
FANCA-209ENST00000562424 UHRF1BP1LA0JNW5 1464 aa19.16■□□□□ 0.66
FANCA-209ENST00000562424 UACAQ9BZF9 1416 aa19.15■□□□□ 0.66
FANCA-209ENST00000562424 ABCC2Q92887 1545 aa19.14■□□□□ 0.65
FANCA-209ENST00000562424 CNKSR2Q8WXI2 1034 aa19.12■□□□□ 0.65
FANCA-209ENST00000562424 SAMD9Q5K651 1589 aa19.08■□□□□ 0.65
FANCA-209ENST00000562424 DIP2BQ9P265 1576 aa19.08■□□□□ 0.65
FANCA-209ENST00000562424 KDM5BQ9UGL1 1544 aa19.07■□□□□ 0.64
FANCA-209ENST00000562424 PLB1Q6P1J6 1458 aa19.05■□□□□ 0.64
FANCA-209ENST00000562424 ABCA8O94911 1581 aa19.05■□□□□ 0.64
FANCA-209ENST00000562424 ZCCHC11Q5TAX3 1644 aaKnown RBP19.04■□□□□ 0.64
FANCA-209ENST00000562424 ASXL2Q76L83 1435 aa19.02■□□□□ 0.64
FANCA-209ENST00000562424 P3H3Q8IVL6 736 aa19■□□□□ 0.63
FANCA-209ENST00000562424 KDM4FA0A1W2PPD8 638 aa18.98■□□□□ 0.63
FANCA-209ENST00000562424 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
FANCA-209ENST00000562424 EFCAB5A4FU69 1503 aa18.96■□□□□ 0.63
FANCA-209ENST00000562424 TSPOAP1O95153 1857 aa18.96■□□□□ 0.63
FANCA-209ENST00000562424 GLI2P10070 1586 aa18.95■□□□□ 0.62
FANCA-209ENST00000562424 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
FANCA-209ENST00000562424 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
FANCA-209ENST00000562424 KDM6BO15054 1643 aa18.94■□□□□ 0.62
FANCA-209ENST00000562424 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
FANCA-209ENST00000562424 FHOD3Q2V2M9 1422 aa18.93■□□□□ 0.62
FANCA-209ENST00000562424 RAPGEF6Q8TEU7 1601 aa18.92■□□□□ 0.62
FANCA-209ENST00000562424 EPRSP07814 1512 aaKnown RBP18.92■□□□□ 0.62
FANCA-209ENST00000562424 WDR7Q9Y4E6 1490 aa18.91■□□□□ 0.62
FANCA-209ENST00000562424 ATP10BO94823 1461 aa18.87■□□□□ 0.61
FANCA-209ENST00000562424 PPRC1Q5VV67 1664 aaKnown RBP18.87■□□□□ 0.61
FANCA-209ENST00000562424 MAP3K4Q9Y6R4 1608 aa18.87■□□□□ 0.61
FANCA-209ENST00000562424 DMRT2Q9Y5R5 561 aa18.84■□□□□ 0.61
FANCA-209ENST00000562424 NUP153P49790 1475 aaKnown RBP18.84■□□□□ 0.61
FANCA-209ENST00000562424 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
FANCA-209ENST00000562424 ARID3CA6NKF2 412 aa18.82■□□□□ 0.6
FANCA-209ENST00000562424 CFAP43Q8NDM7 1665 aa18.81■□□□□ 0.6
FANCA-209ENST00000562424 KCNH8Q96L42 1107 aa18.78■□□□□ 0.6
FANCA-209ENST00000562424 FMN1Q68DA7 1419 aa18.77■□□□□ 0.6
FANCA-209ENST00000562424 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.59
FANCA-209ENST00000562424 COL17A1Q9UMD9 1497 aaPredicted RBP18.75■□□□□ 0.59
FANCA-209ENST00000562424 CD109Q6YHK3 1445 aa18.74■□□□□ 0.59
FANCA-209ENST00000562424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
FANCA-209ENST00000562424 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
FANCA-209ENST00000562424 MAGI3Q5TCQ9 1506 aa18.73■□□□□ 0.59
FANCA-209ENST00000562424 HECW1Q76N89 1606 aa18.72■□□□□ 0.59
FANCA-209ENST00000562424 ABCA9Q8IUA7 1624 aa18.72■□□□□ 0.59
FANCA-209ENST00000562424 CDK13Q14004 1512 aaKnown RBP18.69■□□□□ 0.58
FANCA-209ENST00000562424 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
FANCA-209ENST00000562424 PLEKHD1A6NEE1 506 aa18.68■□□□□ 0.58
FANCA-209ENST00000562424 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
FANCA-209ENST00000562424 CLIP1P30622 1438 aa18.66■□□□□ 0.58
FANCA-209ENST00000562424 ILDR1Q86SU0 546 aaPredicted RBP18.65■□□□□ 0.58
FANCA-209ENST00000562424 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
FANCA-209ENST00000562424 LRRIQ1Q96JM4 1722 aa18.65■□□□□ 0.58
FANCA-209ENST00000562424 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
FANCA-209ENST00000562424 PCF11O94913 1555 aaKnown RBP18.62■□□□□ 0.57
FANCA-209ENST00000562424 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
FANCA-209ENST00000562424 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.6■□□□□ 0.57
FANCA-209ENST00000562424 TTC37Q6PGP7 1564 aa18.58■□□□□ 0.56
FANCA-209ENST00000562424 ARAP3Q8WWN8 1544 aa18.58■□□□□ 0.56
FANCA-209ENST00000562424 PHLDB1Q86UU1 1377 aa18.57■□□□□ 0.56
FANCA-209ENST00000562424 CDK11AQ9UQ88 783 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms