RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
FANCA-209ENST00000562424 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
FANCA-209ENST00000562424 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
FANCA-209ENST00000562424 CCDC180Q9P1Z9 1646 aa25.19■■□□□ 1.62
FANCA-209ENST00000562424 ABCC9O60706 1549 aa24.85■■□□□ 1.57
FANCA-209ENST00000562424 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
FANCA-209ENST00000562424 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
FANCA-209ENST00000562424 NACADO15069 1562 aa23.69■■□□□ 1.38
FANCA-209ENST00000562424 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
FANCA-209ENST00000562424 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
FANCA-209ENST00000562424 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
FANCA-209ENST00000562424 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
FANCA-209ENST00000562424 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
FANCA-209ENST00000562424 DCAF1Q9Y4B6 1507 aa23.36■■□□□ 1.33
FANCA-209ENST00000562424 UNC13AQ9UPW8 1703 aa23.26■■□□□ 1.31
FANCA-209ENST00000562424 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.32e-7■■■■■ 28
FANCA-209ENST00000562424 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
FANCA-209ENST00000562424 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
FANCA-209ENST00000562424 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
FANCA-209ENST00000562424 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
FANCA-209ENST00000562424 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
FANCA-209ENST00000562424 CC2D2AQ9P2K1 1620 aa22.42■■□□□ 1.18
FANCA-209ENST00000562424 PLPPR3Q6T4P5 718 aa22.36■■□□□ 1.17
FANCA-209ENST00000562424 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
FANCA-209ENST00000562424 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
FANCA-209ENST00000562424 DNAJC5Q9H3Z4 198 aa21.88■■□□□ 1.09
FANCA-209ENST00000562424 NCAPD3P42695 1498 aa21.84■■□□□ 1.09
FANCA-209ENST00000562424 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.08
FANCA-209ENST00000562424 FOXD1Q16676 465 aa21.82■■□□□ 1.08
FANCA-209ENST00000562424 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
FANCA-209ENST00000562424 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
FANCA-209ENST00000562424 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
FANCA-209ENST00000562424 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
FANCA-209ENST00000562424 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
FANCA-209ENST00000562424 WIZO95785 1651 aa21.52■■□□□ 1.04
FANCA-209ENST00000562424 CUX2O14529 1486 aa21.52■■□□□ 1.03
FANCA-209ENST00000562424 ERCC6Q03468 1493 aa21.45■■□□□ 1.02
FANCA-209ENST00000562424 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
FANCA-209ENST00000562424 NESP48681 1621 aa21.35■■□□□ 1.01
FANCA-209ENST00000562424 LAMC3Q9Y6N6 1575 aa21.3■■□□□ 1
FANCA-209ENST00000562424 TOP2AP11388 1531 aaKnown RBP21.27■■□□□ 1
FANCA-209ENST00000562424 ADRA2BP18089 450 aa21.18■□□□□ 0.98
FANCA-209ENST00000562424 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
FANCA-209ENST00000562424 CADPSQ9ULU8 1353 aa21.18■□□□□ 0.98
FANCA-209ENST00000562424 PDS5BQ9NTI5 1447 aa21.13■□□□□ 0.97
FANCA-209ENST00000562424 KIF21AQ7Z4S6 1674 aa21.13■□□□□ 0.97
FANCA-209ENST00000562424 THOC2Q8NI27 1593 aaKnown RBP21.09■□□□□ 0.97
FANCA-209ENST00000562424 CFTRP13569 1480 aa21.04■□□□□ 0.96
FANCA-209ENST00000562424 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
FANCA-209ENST00000562424 PRDM2Q13029 1718 aa20.95■□□□□ 0.94
FANCA-209ENST00000562424 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
FANCA-209ENST00000562424 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
FANCA-209ENST00000562424 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
FANCA-209ENST00000562424 WDR62O43379 1518 aa20.88■□□□□ 0.93
FANCA-209ENST00000562424 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
FANCA-209ENST00000562424 SUPT5HO00267 1087 aaKnown RBP20.75■□□□□ 0.91
FANCA-209ENST00000562424 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
FANCA-209ENST00000562424 PIAS4Q8N2W9 510 aaPredicted RBP20.65■□□□□ 0.9
FANCA-209ENST00000562424 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
FANCA-209ENST00000562424 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
FANCA-209ENST00000562424 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
FANCA-209ENST00000562424 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
FANCA-209ENST00000562424 IFT140Q96RY7 1462 aa20.5■□□□□ 0.87
FANCA-209ENST00000562424 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
FANCA-209ENST00000562424 ZNF608Q9ULD9 1512 aaPredicted RBP20.42■□□□□ 0.86
FANCA-209ENST00000562424 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
FANCA-209ENST00000562424 CUX1P39880 1505 aa20.4■□□□□ 0.86
FANCA-209ENST00000562424 EIF4G3O43432 1585 aaKnown RBP20.35■□□□□ 0.85
FANCA-209ENST00000562424 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
FANCA-209ENST00000562424 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
FANCA-209ENST00000562424 SOGA1O94964 1423 aa20.32■□□□□ 0.84
FANCA-209ENST00000562424 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.84
FANCA-209ENST00000562424 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
FANCA-209ENST00000562424 RIMBP3CA6NJZ7 1639 aa20.22■□□□□ 0.83
FANCA-209ENST00000562424 RIMBP3BA6NNM3 1639 aa20.22■□□□□ 0.83
FANCA-209ENST00000562424 RIMBP3Q9UFD9 1639 aa20.22■□□□□ 0.83
FANCA-209ENST00000562424 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
FANCA-209ENST00000562424 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
FANCA-209ENST00000562424 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
FANCA-209ENST00000562424 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
FANCA-209ENST00000562424 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
FANCA-209ENST00000562424 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
FANCA-209ENST00000562424 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
FANCA-209ENST00000562424 CHD1O14646 1710 aa20.15■□□□□ 0.82
FANCA-209ENST00000562424 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
FANCA-209ENST00000562424 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
FANCA-209ENST00000562424 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
FANCA-209ENST00000562424 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
FANCA-209ENST00000562424 SNAPC4Q5SXM2 1469 aa20.1■□□□□ 0.81
FANCA-209ENST00000562424 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
FANCA-209ENST00000562424 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
FANCA-209ENST00000562424 MSH5O43196 834 aa20.05■□□□□ 0.8
FANCA-209ENST00000562424 FBLN2P98095 1184 aa20.03■□□□□ 0.8
FANCA-209ENST00000562424 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
FANCA-209ENST00000562424 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
FANCA-209ENST00000562424 ARAP1Q96P48 1450 aa19.95■□□□□ 0.78
FANCA-209ENST00000562424 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
FANCA-209ENST00000562424 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
FANCA-209ENST00000562424 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
FANCA-209ENST00000562424 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms