RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 TOPBP1Q92547 1522 aa12.97□□□□□ -0.33
CLUHP3-206ENST00000562354 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
CLUHP3-206ENST00000562354 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
CLUHP3-206ENST00000562354 FAM50AQ14320 339 aaKnown RBP12.95□□□□□ -0.34
CLUHP3-206ENST00000562354 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
CLUHP3-206ENST00000562354 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
CLUHP3-206ENST00000562354 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.35
CLUHP3-206ENST00000562354 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
CLUHP3-206ENST00000562354 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
CLUHP3-206ENST00000562354 ARID3CA6NKF2 412 aa12.85□□□□□ -0.35
CLUHP3-206ENST00000562354 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
CLUHP3-206ENST00000562354 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
CLUHP3-206ENST00000562354 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
CLUHP3-206ENST00000562354 PRKCSHP14314 528 aaPredicted RBP12.84□□□□□ -0.35
CLUHP3-206ENST00000562354 PRDM2Q13029 1718 aa12.84□□□□□ -0.35
CLUHP3-206ENST00000562354 MTUS2Q5JR59 1369 aa12.83□□□□□ -0.36
CLUHP3-206ENST00000562354 MIER1Q8N108 512 aa12.81□□□□□ -0.36
CLUHP3-206ENST00000562354 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
CLUHP3-206ENST00000562354 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
CLUHP3-206ENST00000562354 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
CLUHP3-206ENST00000562354 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
CLUHP3-206ENST00000562354 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLUHP3-206ENST00000562354 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
CLUHP3-206ENST00000562354 ANP32CO43423 234 aa12.78□□□□□ -0.36
CLUHP3-206ENST00000562354 CCNB3Q8WWL7 1395 aa12.76□□□□□ -0.37
CLUHP3-206ENST00000562354 IFT140Q96RY7 1462 aa12.74□□□□□ -0.37
CLUHP3-206ENST00000562354 GRIN2BQ13224 1484 aa12.74□□□□□ -0.37
CLUHP3-206ENST00000562354 CUL7Q14999 1698 aa12.71□□□□□ -0.37
CLUHP3-206ENST00000562354 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.37
CLUHP3-206ENST00000562354 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
CLUHP3-206ENST00000562354 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
CLUHP3-206ENST00000562354 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
CLUHP3-206ENST00000562354 BCANQ96GW7 911 aa12.64□□□□□ -0.39
CLUHP3-206ENST00000562354 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
CLUHP3-206ENST00000562354 CARMIL2Q6F5E8 1435 aa12.63□□□□□ -0.39
CLUHP3-206ENST00000562354 ZNF777Q9ULD5 760 aaPredicted RBP12.63□□□□□ -0.39
CLUHP3-206ENST00000562354 LRRC9Q6ZRR7 1453 aa12.62□□□□□ -0.39
CLUHP3-206ENST00000562354 SNAPC4Q5SXM2 1469 aa12.62□□□□□ -0.39
CLUHP3-206ENST00000562354 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
CLUHP3-206ENST00000562354 FKBP8Q14318 412 aa12.61□□□□□ -0.39
CLUHP3-206ENST00000562354 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
CLUHP3-206ENST00000562354 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
CLUHP3-206ENST00000562354 CHIC2Q9UKJ5 165 aa12.61□□□□□ -0.39
CLUHP3-206ENST00000562354 JPH4Q96JJ6 628 aa12.6□□□□□ -0.39
CLUHP3-206ENST00000562354 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
CLUHP3-206ENST00000562354 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
CLUHP3-206ENST00000562354 TIAM1Q13009 1591 aa12.58□□□□□ -0.4
CLUHP3-206ENST00000562354 SUPT16HQ9Y5B9 1047 aaKnown RBP12.57□□□□□ -0.4
CLUHP3-206ENST00000562354 RRBP1Q9P2E9 1410 aaKnown RBP12.56□□□□□ -0.4
CLUHP3-206ENST00000562354 ABCA5Q8WWZ7 1642 aa12.56□□□□□ -0.4
CLUHP3-206ENST00000562354 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
CLUHP3-206ENST00000562354 SETD5Q9C0A6 1442 aa12.56□□□□□ -0.4
CLUHP3-206ENST00000562354 WDR62O43379 1518 aa12.55□□□□□ -0.4
CLUHP3-206ENST00000562354 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
CLUHP3-206ENST00000562354 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
CLUHP3-206ENST00000562354 TONSLQ96HA7 1378 aa12.55□□□□□ -0.4
CLUHP3-206ENST00000562354 RRP7BPQ9NSQ0 103 aa12.55□□□□□ -0.4
CLUHP3-206ENST00000562354 MAP3K1Q13233 1512 aa12.54□□□□□ -0.4
CLUHP3-206ENST00000562354 IQGAP2Q13576 1575 aa12.54□□□□□ -0.4
CLUHP3-206ENST00000562354 RAB3GAP2Q9H2M9 1393 aa12.54□□□□□ -0.4
CLUHP3-206ENST00000562354 KIAA0586Q9BVV6 1533 aa12.54□□□□□ -0.4
CLUHP3-206ENST00000562354 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
CLUHP3-206ENST00000562354 CCDC18Q5T9S5 1454 aa12.52□□□□□ -0.4
CLUHP3-206ENST00000562354 MAGI1Q96QZ7 1491 aaPredicted RBP12.52□□□□□ -0.4
CLUHP3-206ENST00000562354 DDX10Q13206 875 aaKnown RBP12.52□□□□□ -0.4
CLUHP3-206ENST00000562354 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.41
CLUHP3-206ENST00000562354 GRIN2AQ12879 1464 aa12.51□□□□□ -0.41
CLUHP3-206ENST00000562354 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
CLUHP3-206ENST00000562354 CTTNBP2Q8WZ74 1663 aa12.5□□□□□ -0.41
CLUHP3-206ENST00000562354 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
CLUHP3-206ENST00000562354 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
CLUHP3-206ENST00000562354 FGD6Q6ZV73 1430 aa12.49□□□□□ -0.41
CLUHP3-206ENST00000562354 DHX57Q6P158 1386 aaKnown RBP12.48□□□□□ -0.41
CLUHP3-206ENST00000562354 NCOA2Q15596 1464 aa12.47□□□□□ -0.41
CLUHP3-206ENST00000562354 TSPY4P0CV99 314 aa12.47□□□□□ -0.41
CLUHP3-206ENST00000562354 TSPY10P0CW01 314 aa12.47□□□□□ -0.41
CLUHP3-206ENST00000562354 MYOM3Q5VTT5 1437 aa12.47□□□□□ -0.41
CLUHP3-206ENST00000562354 CCER2I3L3R5 266 aa12.46□□□□□ -0.42
CLUHP3-206ENST00000562354 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
CLUHP3-206ENST00000562354 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
CLUHP3-206ENST00000562354 PTPRGP23470 1445 aa12.45□□□□□ -0.42
CLUHP3-206ENST00000562354 HECW1Q76N89 1606 aa12.45□□□□□ -0.42
CLUHP3-206ENST00000562354 EIF4G3O43432 1585 aaKnown RBP12.44□□□□□ -0.42
CLUHP3-206ENST00000562354 EHBP1L1Q8N3D4 1523 aa12.44□□□□□ -0.42
CLUHP3-206ENST00000562354 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
CLUHP3-206ENST00000562354 KCNH8Q96L42 1107 aa12.44□□□□□ -0.42
CLUHP3-206ENST00000562354 HNRNPUQ00839 825 aaKnown RBP eCLIP12.43□□□□□ -0.42
CLUHP3-206ENST00000562354 SIN3AQ96ST3 1273 aa12.43□□□□□ -0.42
CLUHP3-206ENST00000562354 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
CLUHP3-206ENST00000562354 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLUHP3-206ENST00000562354 PRG4Q92954 1404 aaPredicted RBP12.4□□□□□ -0.42
CLUHP3-206ENST00000562354 CDK13Q14004 1512 aaKnown RBP12.39□□□□□ -0.43
CLUHP3-206ENST00000562354 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
CLUHP3-206ENST00000562354 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
CLUHP3-206ENST00000562354 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
CLUHP3-206ENST00000562354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLUHP3-206ENST00000562354 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
CLUHP3-206ENST00000562354 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
CLUHP3-206ENST00000562354 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
CLUHP3-206ENST00000562354 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms