RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
AC010542.3-202ENST00000561728 SPATA31D1Q6ZQQ2 1576 aa18.6■□□□□ 0.57
AC010542.3-202ENST00000561728 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
AC010542.3-202ENST00000561728 SHROOM2Q13796 1616 aa18.59■□□□□ 0.57
AC010542.3-202ENST00000561728 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
AC010542.3-202ENST00000561728 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
AC010542.3-202ENST00000561728 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
AC010542.3-202ENST00000561728 NUP160Q12769 1436 aa18.55■□□□□ 0.56
AC010542.3-202ENST00000561728 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.56
AC010542.3-202ENST00000561728 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
AC010542.3-202ENST00000561728 ADCY10Q96PN6 1610 aa18.46■□□□□ 0.55
AC010542.3-202ENST00000561728 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
AC010542.3-202ENST00000561728 COL17A1Q9UMD9 1497 aaPredicted RBP18.41■□□□□ 0.54
AC010542.3-202ENST00000561728 PPRC1Q5VV67 1664 aaKnown RBP18.41■□□□□ 0.54
AC010542.3-202ENST00000561728 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
AC010542.3-202ENST00000561728 ABCA5Q8WWZ7 1642 aa18.36■□□□□ 0.53
AC010542.3-202ENST00000561728 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
AC010542.3-202ENST00000561728 PCF11O94913 1555 aaKnown RBP18.31■□□□□ 0.52
AC010542.3-202ENST00000561728 CUX1P39880 1505 aa18.31■□□□□ 0.52
AC010542.3-202ENST00000561728 GLI2P10070 1586 aa18.3■□□□□ 0.52
AC010542.3-202ENST00000561728 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
AC010542.3-202ENST00000561728 TEX14Q8IWB6 1497 aa18.27■□□□□ 0.52
AC010542.3-202ENST00000561728 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.52
AC010542.3-202ENST00000561728 PTPRMP28827 1452 aa18.26■□□□□ 0.51
AC010542.3-202ENST00000561728 PLB1Q6P1J6 1458 aa18.24■□□□□ 0.51
AC010542.3-202ENST00000561728 ASXL2Q76L83 1435 aa18.22■□□□□ 0.51
AC010542.3-202ENST00000561728 KIF21BO75037 1637 aa18.18■□□□□ 0.5
AC010542.3-202ENST00000561728 HSPA2P54652 639 aa18.15■□□□□ 0.5
AC010542.3-202ENST00000561728 MAP3K4Q9Y6R4 1608 aa18.15■□□□□ 0.5
AC010542.3-202ENST00000561728 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
AC010542.3-202ENST00000561728 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
AC010542.3-202ENST00000561728 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
AC010542.3-202ENST00000561728 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.49
AC010542.3-202ENST00000561728 KIAA0586Q9BVV6 1533 aa18.07■□□□□ 0.48
AC010542.3-202ENST00000561728 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
AC010542.3-202ENST00000561728 PTPRGP23470 1445 aa18.05■□□□□ 0.48
AC010542.3-202ENST00000561728 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
AC010542.3-202ENST00000561728 CUL7Q14999 1698 aa18.02■□□□□ 0.47
AC010542.3-202ENST00000561728 MADDQ8WXG6 1647 aa17.97■□□□□ 0.47
AC010542.3-202ENST00000561728 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
AC010542.3-202ENST00000561728 ARID4BQ4LE39 1312 aaPredicted RBP17.93■□□□□ 0.46
AC010542.3-202ENST00000561728 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
AC010542.3-202ENST00000561728 BCORL1Q5H9F3 1711 aa17.92■□□□□ 0.46
AC010542.3-202ENST00000561728 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
AC010542.3-202ENST00000561728 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
AC010542.3-202ENST00000561728 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
AC010542.3-202ENST00000561728 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
AC010542.3-202ENST00000561728 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
AC010542.3-202ENST00000561728 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
AC010542.3-202ENST00000561728 UACAQ9BZF9 1416 aa17.85■□□□□ 0.45
AC010542.3-202ENST00000561728 KDM5BQ9UGL1 1544 aa17.83■□□□□ 0.45
AC010542.3-202ENST00000561728 CARMIL2Q6F5E8 1435 aa17.82■□□□□ 0.44
AC010542.3-202ENST00000561728 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
AC010542.3-202ENST00000561728 WDR7Q9Y4E6 1490 aa17.81■□□□□ 0.44
AC010542.3-202ENST00000561728 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
AC010542.3-202ENST00000561728 ZCCHC11Q5TAX3 1644 aaKnown RBP17.8■□□□□ 0.44
AC010542.3-202ENST00000561728 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
AC010542.3-202ENST00000561728 CFAP43Q8NDM7 1665 aa17.79■□□□□ 0.44
AC010542.3-202ENST00000561728 ARAP3Q8WWN8 1544 aa17.78■□□□□ 0.44
AC010542.3-202ENST00000561728 UBAP1LF5GYI3 381 aa17.71■□□□□ 0.43
AC010542.3-202ENST00000561728 KCNH8Q96L42 1107 aa17.71■□□□□ 0.43
AC010542.3-202ENST00000561728 STRCQ7RTU9 1775 aa17.69■□□□□ 0.42
AC010542.3-202ENST00000561728 LTBP4Q8N2S1 1624 aa17.68■□□□□ 0.42
AC010542.3-202ENST00000561728 PTPRTO14522 1441 aa17.66■□□□□ 0.42
AC010542.3-202ENST00000561728 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
AC010542.3-202ENST00000561728 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.42
AC010542.3-202ENST00000561728 POGZQ7Z3K3 1410 aa17.64■□□□□ 0.42
AC010542.3-202ENST00000561728 PHLDB1Q86UU1 1377 aa17.63■□□□□ 0.41
AC010542.3-202ENST00000561728 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
AC010542.3-202ENST00000561728 FANCAO15360 1455 aa17.57■□□□□ 0.4
AC010542.3-202ENST00000561728 HSPA1LP34931 641 aa17.57■□□□□ 0.4
AC010542.3-202ENST00000561728 ARHGEF40Q8TER5 1519 aa17.56■□□□□ 0.4
AC010542.3-202ENST00000561728 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
AC010542.3-202ENST00000561728 UHRF1BP1Q6BDS2 1440 aa17.55■□□□□ 0.4
AC010542.3-202ENST00000561728 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
AC010542.3-202ENST00000561728 FER1L4A9Z1Z3 1794 aa17.53■□□□□ 0.4
AC010542.3-202ENST00000561728 MLECQ14165 292 aa17.53■□□□□ 0.4
AC010542.3-202ENST00000561728 IQGAP2Q13576 1575 aa17.52■□□□□ 0.39
AC010542.3-202ENST00000561728 DISP1Q96F81 1524 aa17.52■□□□□ 0.39
AC010542.3-202ENST00000561728 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
AC010542.3-202ENST00000561728 NEO1Q92859 1461 aa17.47■□□□□ 0.39
AC010542.3-202ENST00000561728 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
AC010542.3-202ENST00000561728 CEBPAP49715 358 aaPredicted RBP17.45■□□□□ 0.38
AC010542.3-202ENST00000561728 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
AC010542.3-202ENST00000561728 IGF1RP08069 1367 aa17.44■□□□□ 0.38
AC010542.3-202ENST00000561728 ZNF335Q9H4Z2 1342 aaPredicted RBP17.41■□□□□ 0.38
AC010542.3-202ENST00000561728 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
AC010542.3-202ENST00000561728 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
AC010542.3-202ENST00000561728 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
AC010542.3-202ENST00000561728 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
AC010542.3-202ENST00000561728 SIGLEC1Q9BZZ2 1709 aa17.36■□□□□ 0.37
AC010542.3-202ENST00000561728 TOM1O60784 492 aa17.36■□□□□ 0.37
AC010542.3-202ENST00000561728 NCOA1Q15788 1441 aa17.36■□□□□ 0.37
AC010542.3-202ENST00000561728 ZFYVE16Q7Z3T8 1539 aa17.35■□□□□ 0.37
AC010542.3-202ENST00000561728 ARHGEF12Q9NZN5 1544 aa17.35■□□□□ 0.37
AC010542.3-202ENST00000561728 EFCAB5A4FU69 1503 aa17.33■□□□□ 0.37
AC010542.3-202ENST00000561728 UGGT2Q9NYU1 1516 aa17.33■□□□□ 0.37
AC010542.3-202ENST00000561728 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.36
AC010542.3-202ENST00000561728 RICTORQ6R327 1708 aa17.31■□□□□ 0.36
AC010542.3-202ENST00000561728 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms