RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
RORA-212ENST00000560004 IQGAP2Q13576 1575 aa18.82■□□□□ 0.6
RORA-212ENST00000560004 KIAA0586Q9BVV6 1533 aa18.82■□□□□ 0.6
RORA-212ENST00000560004 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
RORA-212ENST00000560004 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
RORA-212ENST00000560004 UGGT2Q9NYU1 1516 aa18.74■□□□□ 0.59
RORA-212ENST00000560004 SAMD9Q5K651 1589 aa18.7■□□□□ 0.58
RORA-212ENST00000560004 ERCC6L2Q5T890 1561 aa18.7■□□□□ 0.58
RORA-212ENST00000560004 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
RORA-212ENST00000560004 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
RORA-212ENST00000560004 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
RORA-212ENST00000560004 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
RORA-212ENST00000560004 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
RORA-212ENST00000560004 ARHGEF11O15085 1522 aa18.64■□□□□ 0.58
RORA-212ENST00000560004 PRG4Q92954 1404 aaPredicted RBP18.63■□□□□ 0.57
RORA-212ENST00000560004 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
RORA-212ENST00000560004 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
RORA-212ENST00000560004 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
RORA-212ENST00000560004 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
RORA-212ENST00000560004 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
RORA-212ENST00000560004 ARHGAP35Q9NRY4 1499 aa18.59■□□□□ 0.57
RORA-212ENST00000560004 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
RORA-212ENST00000560004 ARAP1Q96P48 1450 aa18.54■□□□□ 0.56
RORA-212ENST00000560004 CLIP1P30622 1438 aa18.54■□□□□ 0.56
RORA-212ENST00000560004 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
RORA-212ENST00000560004 FHOD3Q2V2M9 1422 aa18.52■□□□□ 0.56
RORA-212ENST00000560004 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
RORA-212ENST00000560004 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
RORA-212ENST00000560004 P3H3Q8IVL6 736 aa18.44■□□□□ 0.54
RORA-212ENST00000560004 ABCA8O94911 1581 aa18.43■□□□□ 0.54
RORA-212ENST00000560004 PTPRGP23470 1445 aa18.41■□□□□ 0.54
RORA-212ENST00000560004 PCF11O94913 1555 aaKnown RBP18.41■□□□□ 0.54
RORA-212ENST00000560004 ADCY10Q96PN6 1610 aa18.41■□□□□ 0.54
RORA-212ENST00000560004 RAPGEF6Q8TEU7 1601 aa18.4■□□□□ 0.54
RORA-212ENST00000560004 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.54
RORA-212ENST00000560004 ABCC2Q92887 1545 aa18.38■□□□□ 0.53
RORA-212ENST00000560004 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
RORA-212ENST00000560004 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
RORA-212ENST00000560004 LRRIQ1Q96JM4 1722 aa18.36■□□□□ 0.53
RORA-212ENST00000560004 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
RORA-212ENST00000560004 UACAQ9BZF9 1416 aa18.35■□□□□ 0.53
RORA-212ENST00000560004 HECW1Q76N89 1606 aa18.34■□□□□ 0.53
RORA-212ENST00000560004 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.53
RORA-212ENST00000560004 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.53
RORA-212ENST00000560004 NUP153P49790 1475 aaKnown RBP18.33■□□□□ 0.52
RORA-212ENST00000560004 FYCO1Q9BQS8 1478 aa18.32■□□□□ 0.52
RORA-212ENST00000560004 CASKIN1Q8WXD9 1431 aa18.31■□□□□ 0.52
RORA-212ENST00000560004 CYB5RLQ6IPT4 315 aa18.29■□□□□ 0.52
RORA-212ENST00000560004 ZCCHC11Q5TAX3 1644 aaKnown RBP18.29■□□□□ 0.52
RORA-212ENST00000560004 KDM5BQ9UGL1 1544 aa18.27■□□□□ 0.51
RORA-212ENST00000560004 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
RORA-212ENST00000560004 CDK13Q14004 1512 aaKnown RBP18.24■□□□□ 0.51
RORA-212ENST00000560004 EPRSP07814 1512 aaKnown RBP18.23■□□□□ 0.51
RORA-212ENST00000560004 ATP10BO94823 1461 aa18.21■□□□□ 0.51
RORA-212ENST00000560004 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
RORA-212ENST00000560004 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
RORA-212ENST00000560004 MAPKBP1O60336 1514 aa18.18■□□□□ 0.5
RORA-212ENST00000560004 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
RORA-212ENST00000560004 MAGI3Q5TCQ9 1506 aa18.16■□□□□ 0.5
RORA-212ENST00000560004 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
RORA-212ENST00000560004 ARID3CA6NKF2 412 aa18.13■□□□□ 0.49
RORA-212ENST00000560004 ASXL2Q76L83 1435 aa18.11■□□□□ 0.49
RORA-212ENST00000560004 WDR7Q9Y4E6 1490 aa18.1■□□□□ 0.49
RORA-212ENST00000560004 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
RORA-212ENST00000560004 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.48
RORA-212ENST00000560004 DIP2BQ9P265 1576 aa18.07■□□□□ 0.48
RORA-212ENST00000560004 KIF14Q15058 1648 aa18.06■□□□□ 0.48
RORA-212ENST00000560004 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
RORA-212ENST00000560004 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
RORA-212ENST00000560004 LRRC9Q6ZRR7 1453 aa18.04■□□□□ 0.48
RORA-212ENST00000560004 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
RORA-212ENST00000560004 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
RORA-212ENST00000560004 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
RORA-212ENST00000560004 GLI2P10070 1586 aa18■□□□□ 0.47
RORA-212ENST00000560004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
RORA-212ENST00000560004 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
RORA-212ENST00000560004 ABCA9Q8IUA7 1624 aa18■□□□□ 0.47
RORA-212ENST00000560004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.99■□□□□ 0.47
RORA-212ENST00000560004 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
RORA-212ENST00000560004 KANK4Q5T7N3 995 aaPredicted RBP17.98■□□□□ 0.47
RORA-212ENST00000560004 MAP3K4Q9Y6R4 1608 aa17.98■□□□□ 0.47
RORA-212ENST00000560004 MTUS2Q5JR59 1369 aa17.97■□□□□ 0.47
RORA-212ENST00000560004 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
RORA-212ENST00000560004 CDK11AQ9UQ88 783 aaPredicted RBP17.94■□□□□ 0.46
RORA-212ENST00000560004 PPRC1Q5VV67 1664 aaKnown RBP17.93■□□□□ 0.46
RORA-212ENST00000560004 CDC42BPAQ5VT25 1732 aa17.93■□□□□ 0.46
RORA-212ENST00000560004 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
RORA-212ENST00000560004 MYO5CQ9NQX4 1742 aa17.92■□□□□ 0.46
RORA-212ENST00000560004 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
RORA-212ENST00000560004 APLP2Q06481 763 aa17.9■□□□□ 0.46
RORA-212ENST00000560004 CDC42BPBQ9Y5S2 1711 aa17.89■□□□□ 0.46
RORA-212ENST00000560004 ITSN2Q9NZM3 1697 aa17.89■□□□□ 0.45
RORA-212ENST00000560004 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
RORA-212ENST00000560004 ARAP3Q8WWN8 1544 aa17.86■□□□□ 0.45
RORA-212ENST00000560004 GPATCH8Q9UKJ3 1502 aaKnown RBP17.86■□□□□ 0.45
RORA-212ENST00000560004 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
RORA-212ENST00000560004 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
RORA-212ENST00000560004 FAM69CQ0P6D2 419 aa17.84■□□□□ 0.45
RORA-212ENST00000560004 CD109Q6YHK3 1445 aa17.83■□□□□ 0.45
RORA-212ENST00000560004 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms