RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 NISCHQ9Y2I1 1504 aa27.39■■□□□ 1.98
RORA-212ENST00000560004 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
RORA-212ENST00000560004 ABCC9O60706 1549 aa23.25■■□□□ 1.31
RORA-212ENST00000560004 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
RORA-212ENST00000560004 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
RORA-212ENST00000560004 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
RORA-212ENST00000560004 NACADO15069 1562 aa22.63■■□□□ 1.21
RORA-212ENST00000560004 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
RORA-212ENST00000560004 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
RORA-212ENST00000560004 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
RORA-212ENST00000560004 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
RORA-212ENST00000560004 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.11
RORA-212ENST00000560004 SHROOM4Q9ULL8 1493 aa21.79■■□□□ 1.08
RORA-212ENST00000560004 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
RORA-212ENST00000560004 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
RORA-212ENST00000560004 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
RORA-212ENST00000560004 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
RORA-212ENST00000560004 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
RORA-212ENST00000560004 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
RORA-212ENST00000560004 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.97
RORA-212ENST00000560004 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
RORA-212ENST00000560004 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
RORA-212ENST00000560004 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
RORA-212ENST00000560004 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
RORA-212ENST00000560004 WIZO95785 1651 aa20.96■□□□□ 0.95
RORA-212ENST00000560004 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
RORA-212ENST00000560004 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
RORA-212ENST00000560004 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
RORA-212ENST00000560004 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
RORA-212ENST00000560004 NCAPD3P42695 1498 aa20.85■□□□□ 0.93
RORA-212ENST00000560004 BAZ1BQ9UIG0 1483 aaKnown RBP20.78■□□□□ 0.92
RORA-212ENST00000560004 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
RORA-212ENST00000560004 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
RORA-212ENST00000560004 CCDC88BA6NC98 1476 aa20.44■□□□□ 0.86
RORA-212ENST00000560004 NESP48681 1621 aa20.28■□□□□ 0.84
RORA-212ENST00000560004 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
RORA-212ENST00000560004 PRDM2Q13029 1718 aa20.24■□□□□ 0.83
RORA-212ENST00000560004 CFTRP13569 1480 aa20.24■□□□□ 0.83
RORA-212ENST00000560004 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
RORA-212ENST00000560004 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
RORA-212ENST00000560004 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
RORA-212ENST00000560004 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
RORA-212ENST00000560004 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
RORA-212ENST00000560004 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
RORA-212ENST00000560004 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
RORA-212ENST00000560004 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
RORA-212ENST00000560004 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
RORA-212ENST00000560004 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
RORA-212ENST00000560004 WDR62O43379 1518 aa19.86■□□□□ 0.77
RORA-212ENST00000560004 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.76
RORA-212ENST00000560004 CUX1P39880 1505 aa19.81■□□□□ 0.76
RORA-212ENST00000560004 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
RORA-212ENST00000560004 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
RORA-212ENST00000560004 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
RORA-212ENST00000560004 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
RORA-212ENST00000560004 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
RORA-212ENST00000560004 CUX2O14529 1486 aa19.67■□□□□ 0.74
RORA-212ENST00000560004 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
RORA-212ENST00000560004 FGD5Q6ZNL6 1462 aa19.66■□□□□ 0.74
RORA-212ENST00000560004 WDR97A6NE52 1622 aa19.6■□□□□ 0.73
RORA-212ENST00000560004 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
RORA-212ENST00000560004 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
RORA-212ENST00000560004 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
RORA-212ENST00000560004 SOGA1O94964 1423 aa19.49■□□□□ 0.71
RORA-212ENST00000560004 ABCA10Q8WWZ4 1543 aa19.48■□□□□ 0.71
RORA-212ENST00000560004 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
RORA-212ENST00000560004 EIF4G3O43432 1585 aaKnown RBP19.45■□□□□ 0.7
RORA-212ENST00000560004 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
RORA-212ENST00000560004 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
RORA-212ENST00000560004 PBRM1Q86U86 1689 aa19.36■□□□□ 0.69
RORA-212ENST00000560004 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.69
RORA-212ENST00000560004 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
RORA-212ENST00000560004 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
RORA-212ENST00000560004 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
RORA-212ENST00000560004 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
RORA-212ENST00000560004 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
RORA-212ENST00000560004 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
RORA-212ENST00000560004 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
RORA-212ENST00000560004 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
RORA-212ENST00000560004 CUL7Q14999 1698 aa19.19■□□□□ 0.66
RORA-212ENST00000560004 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
RORA-212ENST00000560004 EEA1Q15075 1411 aa19.17■□□□□ 0.66
RORA-212ENST00000560004 IGF1RP08069 1367 aa19.16■□□□□ 0.66
RORA-212ENST00000560004 CHD1O14646 1710 aa19.14■□□□□ 0.65
RORA-212ENST00000560004 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
RORA-212ENST00000560004 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
RORA-212ENST00000560004 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
RORA-212ENST00000560004 KIF21BO75037 1637 aa19.05■□□□□ 0.64
RORA-212ENST00000560004 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
RORA-212ENST00000560004 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
RORA-212ENST00000560004 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
RORA-212ENST00000560004 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
RORA-212ENST00000560004 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
RORA-212ENST00000560004 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
RORA-212ENST00000560004 NUP160Q12769 1436 aa18.96■□□□□ 0.63
RORA-212ENST00000560004 CLASP1Q7Z460 1538 aa18.93■□□□□ 0.62
RORA-212ENST00000560004 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
RORA-212ENST00000560004 CHMP7Q8WUX9 453 aaPredicted RBP18.92■□□□□ 0.62
RORA-212ENST00000560004 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
RORA-212ENST00000560004 FBLN2P98095 1184 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms