RNA–Protein interactions for RNA: ENST00000557871.1

AC090971.3-201, humanhuman

BASIC

Gene AC090971.3, Length 1,041 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090971.3-201ENST00000557871 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
AC090971.3-201ENST00000557871 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
AC090971.3-201ENST00000557871 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
AC090971.3-201ENST00000557871 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
AC090971.3-201ENST00000557871 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
AC090971.3-201ENST00000557871 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
AC090971.3-201ENST00000557871 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
AC090971.3-201ENST00000557871 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
AC090971.3-201ENST00000557871 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
AC090971.3-201ENST00000557871 PIP4P2Q8N4L2 257 aa12.66□□□□□ -0.38
AC090971.3-201ENST00000557871 CUX1P39880 1505 aa12.65□□□□□ -0.38
AC090971.3-201ENST00000557871 IFT140Q96RY7 1462 aa12.65□□□□□ -0.38
AC090971.3-201ENST00000557871 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
AC090971.3-201ENST00000557871 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
AC090971.3-201ENST00000557871 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
AC090971.3-201ENST00000557871 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
AC090971.3-201ENST00000557871 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
AC090971.3-201ENST00000557871 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
AC090971.3-201ENST00000557871 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
AC090971.3-201ENST00000557871 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
AC090971.3-201ENST00000557871 WRNQ14191 1432 aaPredicted RBP eCLIP12.56□□□□□ -0.4
AC090971.3-201ENST00000557871 RAD54L2Q9Y4B4 1467 aa12.56□□□□□ -0.4
AC090971.3-201ENST00000557871 SYNJ1O43426 1573 aa12.55□□□□□ -0.4
AC090971.3-201ENST00000557871 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
AC090971.3-201ENST00000557871 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
AC090971.3-201ENST00000557871 SOGA1O94964 1423 aa12.54□□□□□ -0.4
AC090971.3-201ENST00000557871 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
AC090971.3-201ENST00000557871 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
AC090971.3-201ENST00000557871 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.41
AC090971.3-201ENST00000557871 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
AC090971.3-201ENST00000557871 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
AC090971.3-201ENST00000557871 ABCA10Q8WWZ4 1543 aa12.48□□□□□ -0.41
AC090971.3-201ENST00000557871 TDRD9Q8NDG6 1382 aaKnown RBP12.48□□□□□ -0.41
AC090971.3-201ENST00000557871 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
AC090971.3-201ENST00000557871 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.41
AC090971.3-201ENST00000557871 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
AC090971.3-201ENST00000557871 HAX1O00165 279 aa12.44□□□□□ -0.42
AC090971.3-201ENST00000557871 GAPVD1Q14C86 1478 aa12.43□□□□□ -0.42
AC090971.3-201ENST00000557871 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
AC090971.3-201ENST00000557871 GRIN2BQ13224 1484 aa12.42□□□□□ -0.42
AC090971.3-201ENST00000557871 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
AC090971.3-201ENST00000557871 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.42
AC090971.3-201ENST00000557871 CHD1O14646 1710 aa12.4□□□□□ -0.42
AC090971.3-201ENST00000557871 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
AC090971.3-201ENST00000557871 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
AC090971.3-201ENST00000557871 ADAMTS12P58397 1594 aa12.34□□□□□ -0.43
AC090971.3-201ENST00000557871 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
AC090971.3-201ENST00000557871 CHMP7Q8WUX9 453 aaPredicted RBP12.3□□□□□ -0.44
AC090971.3-201ENST00000557871 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
AC090971.3-201ENST00000557871 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
AC090971.3-201ENST00000557871 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
AC090971.3-201ENST00000557871 GRIN2AQ12879 1464 aa12.27□□□□□ -0.44
AC090971.3-201ENST00000557871 EVX2Q03828 476 aa12.27□□□□□ -0.45
AC090971.3-201ENST00000557871 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
AC090971.3-201ENST00000557871 TRIM41Q8WV44 630 aa12.24□□□□□ -0.45
AC090971.3-201ENST00000557871 CUL7Q14999 1698 aa12.23□□□□□ -0.45
AC090971.3-201ENST00000557871 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
AC090971.3-201ENST00000557871 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
AC090971.3-201ENST00000557871 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
AC090971.3-201ENST00000557871 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
AC090971.3-201ENST00000557871 IGF1RP08069 1367 aa12.22□□□□□ -0.45
AC090971.3-201ENST00000557871 CEP170Q5SW79 1584 aa12.22□□□□□ -0.45
AC090971.3-201ENST00000557871 NUP160Q12769 1436 aa12.21□□□□□ -0.45
AC090971.3-201ENST00000557871 CHADLQ6NUI6 762 aa12.21□□□□□ -0.45
AC090971.3-201ENST00000557871 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
AC090971.3-201ENST00000557871 RUSC2Q8N2Y8 1516 aa12.17□□□□□ -0.46
AC090971.3-201ENST00000557871 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
AC090971.3-201ENST00000557871 SHROOM2Q13796 1616 aa12.13□□□□□ -0.47
AC090971.3-201ENST00000557871 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
AC090971.3-201ENST00000557871 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
AC090971.3-201ENST00000557871 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
AC090971.3-201ENST00000557871 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
AC090971.3-201ENST00000557871 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
AC090971.3-201ENST00000557871 EEA1Q15075 1411 aa12.07□□□□□ -0.48
AC090971.3-201ENST00000557871 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
AC090971.3-201ENST00000557871 PRXQ9BXM0 1461 aa12.07□□□□□ -0.48
AC090971.3-201ENST00000557871 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
AC090971.3-201ENST00000557871 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
AC090971.3-201ENST00000557871 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
AC090971.3-201ENST00000557871 IQGAP2Q13576 1575 aa12.05□□□□□ -0.48
AC090971.3-201ENST00000557871 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
AC090971.3-201ENST00000557871 CTTNBP2Q8WZ74 1663 aa12.01□□□□□ -0.49
AC090971.3-201ENST00000557871 GABBR2O75899 941 aa12□□□□□ -0.49
AC090971.3-201ENST00000557871 FAM9AQ8IZU1 332 aaPredicted RBP11.98□□□□□ -0.49
AC090971.3-201ENST00000557871 UGGT2Q9NYU1 1516 aa11.97□□□□□ -0.49
AC090971.3-201ENST00000557871 CD44P16070 742 aaKnown RBP11.97□□□□□ -0.49
AC090971.3-201ENST00000557871 KIF21BO75037 1637 aa11.97□□□□□ -0.49
AC090971.3-201ENST00000557871 CREBZFQ9NS37 354 aa11.96□□□□□ -0.49
AC090971.3-201ENST00000557871 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
AC090971.3-201ENST00000557871 DISP1Q96F81 1524 aa11.95□□□□□ -0.5
AC090971.3-201ENST00000557871 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
AC090971.3-201ENST00000557871 TNIKQ9UKE5 1360 aa11.91□□□□□ -0.5
AC090971.3-201ENST00000557871 ADCY10Q96PN6 1610 aa11.89□□□□□ -0.51
AC090971.3-201ENST00000557871 GOLGA3Q08378 1498 aa11.89□□□□□ -0.51
AC090971.3-201ENST00000557871 PTPRGP23470 1445 aa11.89□□□□□ -0.51
AC090971.3-201ENST00000557871 TTBK1Q5TCY1 1321 aaPredicted RBP11.87□□□□□ -0.51
AC090971.3-201ENST00000557871 CLCN6P51797 869 aa11.87□□□□□ -0.51
AC090971.3-201ENST00000557871 SAMD9Q5K651 1589 aa11.86□□□□□ -0.51
AC090971.3-201ENST00000557871 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
AC090971.3-201ENST00000557871 UACAQ9BZF9 1416 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms