RNA–Protein interactions for RNA: ENST00000557871.1

AC090971.3-201, humanhuman

BASIC

Gene AC090971.3, Length 1,041 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090971.3-201ENST00000557871 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
AC090971.3-201ENST00000557871 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
AC090971.3-201ENST00000557871 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
AC090971.3-201ENST00000557871 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
AC090971.3-201ENST00000557871 FOXD1Q16676 465 aa18.57■□□□□ 0.56
AC090971.3-201ENST00000557871 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
AC090971.3-201ENST00000557871 NISCHQ9Y2I1 1504 aa17.48■□□□□ 0.39
AC090971.3-201ENST00000557871 MSH5O43196 834 aa17.4■□□□□ 0.38
AC090971.3-201ENST00000557871 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
AC090971.3-201ENST00000557871 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
AC090971.3-201ENST00000557871 ADRA2BP18089 450 aa17.32■□□□□ 0.36
AC090971.3-201ENST00000557871 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
AC090971.3-201ENST00000557871 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
AC090971.3-201ENST00000557871 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
AC090971.3-201ENST00000557871 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
AC090971.3-201ENST00000557871 PPP4R3CPQ6ZMV5 832 aa15.56■□□□□ 0.08
AC090971.3-201ENST00000557871 CCDC180Q9P1Z9 1646 aa15.56■□□□□ 0.08
AC090971.3-201ENST00000557871 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
AC090971.3-201ENST00000557871 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
AC090971.3-201ENST00000557871 ABCC9O60706 1549 aa15.19■□□□□ 0.02
AC090971.3-201ENST00000557871 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
AC090971.3-201ENST00000557871 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
AC090971.3-201ENST00000557871 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
AC090971.3-201ENST00000557871 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
AC090971.3-201ENST00000557871 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
AC090971.3-201ENST00000557871 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
AC090971.3-201ENST00000557871 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
AC090971.3-201ENST00000557871 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
AC090971.3-201ENST00000557871 RB1CC1Q8TDY2 1594 aa14.63□□□□□ -0.07
AC090971.3-201ENST00000557871 NACADO15069 1562 aa14.6□□□□□ -0.07
AC090971.3-201ENST00000557871 ZCCHC6Q5VYS8 1495 aaKnown RBP14.59□□□□□ -0.07
AC090971.3-201ENST00000557871 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
AC090971.3-201ENST00000557871 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
AC090971.3-201ENST00000557871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.09
AC090971.3-201ENST00000557871 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
AC090971.3-201ENST00000557871 KCNA4P22459 653 aa14.46□□□□□ -0.09
AC090971.3-201ENST00000557871 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
AC090971.3-201ENST00000557871 SCRIBQ14160 1630 aa14.21□□□□□ -0.13
AC090971.3-201ENST00000557871 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
AC090971.3-201ENST00000557871 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
AC090971.3-201ENST00000557871 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
AC090971.3-201ENST00000557871 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
AC090971.3-201ENST00000557871 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
AC090971.3-201ENST00000557871 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
AC090971.3-201ENST00000557871 CAPN15O75808 1086 aa13.97□□□□□ -0.17
AC090971.3-201ENST00000557871 DSG3P32926 999 aa13.9□□□□□ -0.18
AC090971.3-201ENST00000557871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
AC090971.3-201ENST00000557871 APLP2Q06481 763 aa13.84□□□□□ -0.19
AC090971.3-201ENST00000557871 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
AC090971.3-201ENST00000557871 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
AC090971.3-201ENST00000557871 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
AC090971.3-201ENST00000557871 SAMD1Q6SPF0 538 aaPredicted RBP13.75□□□□□ -0.21
AC090971.3-201ENST00000557871 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
AC090971.3-201ENST00000557871 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
AC090971.3-201ENST00000557871 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
AC090971.3-201ENST00000557871 CECR2Q9BXF3 1484 aa13.65□□□□□ -0.22
AC090971.3-201ENST00000557871 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
AC090971.3-201ENST00000557871 ABCB7O75027 752 aa13.63□□□□□ -0.23
AC090971.3-201ENST00000557871 SMARCA4P51532 1647 aa13.58□□□□□ -0.24
AC090971.3-201ENST00000557871 BAZ1AQ9NRL2 1556 aaPredicted RBP13.56□□□□□ -0.24
AC090971.3-201ENST00000557871 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
AC090971.3-201ENST00000557871 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
AC090971.3-201ENST00000557871 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
AC090971.3-201ENST00000557871 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
AC090971.3-201ENST00000557871 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
AC090971.3-201ENST00000557871 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
AC090971.3-201ENST00000557871 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
AC090971.3-201ENST00000557871 POLA2Q14181 598 aa13.4□□□□□ -0.26
AC090971.3-201ENST00000557871 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
AC090971.3-201ENST00000557871 WIZO95785 1651 aa13.33□□□□□ -0.28
AC090971.3-201ENST00000557871 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
AC090971.3-201ENST00000557871 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
AC090971.3-201ENST00000557871 POTEHQ6S545 545 aa13.29□□□□□ -0.28
AC090971.3-201ENST00000557871 ZBTB22O15209 634 aa13.27□□□□□ -0.29
AC090971.3-201ENST00000557871 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
AC090971.3-201ENST00000557871 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
AC090971.3-201ENST00000557871 NESP48681 1621 aa13.15□□□□□ -0.3
AC090971.3-201ENST00000557871 LAMC3Q9Y6N6 1575 aa13.13□□□□□ -0.31
AC090971.3-201ENST00000557871 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
AC090971.3-201ENST00000557871 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
AC090971.3-201ENST00000557871 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
AC090971.3-201ENST00000557871 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
AC090971.3-201ENST00000557871 CCDC88BA6NC98 1476 aa13.03□□□□□ -0.32
AC090971.3-201ENST00000557871 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.33
AC090971.3-201ENST00000557871 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.33
AC090971.3-201ENST00000557871 CFTRP13569 1480 aa13.01□□□□□ -0.33
AC090971.3-201ENST00000557871 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
AC090971.3-201ENST00000557871 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
AC090971.3-201ENST00000557871 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
AC090971.3-201ENST00000557871 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
AC090971.3-201ENST00000557871 CUX2O14529 1486 aa12.96□□□□□ -0.34
AC090971.3-201ENST00000557871 PRDM2Q13029 1718 aa12.94□□□□□ -0.34
AC090971.3-201ENST00000557871 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
AC090971.3-201ENST00000557871 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
AC090971.3-201ENST00000557871 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
AC090971.3-201ENST00000557871 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
AC090971.3-201ENST00000557871 WDR62O43379 1518 aa12.88□□□□□ -0.35
AC090971.3-201ENST00000557871 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
AC090971.3-201ENST00000557871 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
AC090971.3-201ENST00000557871 FBLN2P98095 1184 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms