RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
PSEN1-219ENST00000556951 ILDR2Q71H61 639 aa23.18■■□□□ 1.3
PSEN1-219ENST00000556951 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
PSEN1-219ENST00000556951 NUP160Q12769 1436 aa23.17■■□□□ 1.3
PSEN1-219ENST00000556951 NPM1P06748 294 aaKnown RBP eCLIP23.16■■□□□ 1.3
PSEN1-219ENST00000556951 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
PSEN1-219ENST00000556951 PRG4Q92954 1404 aaPredicted RBP23.05■■□□□ 1.28
PSEN1-219ENST00000556951 ADCY10Q96PN6 1610 aa23.03■■□□□ 1.28
PSEN1-219ENST00000556951 DISP3Q9P2K9 1392 aa23■■□□□ 1.27
PSEN1-219ENST00000556951 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
PSEN1-219ENST00000556951 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
PSEN1-219ENST00000556951 PPRC1Q5VV67 1664 aaKnown RBP22.97■■□□□ 1.27
PSEN1-219ENST00000556951 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.26
PSEN1-219ENST00000556951 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
PSEN1-219ENST00000556951 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
PSEN1-219ENST00000556951 COL17A1Q9UMD9 1497 aaPredicted RBP22.89■■□□□ 1.25
PSEN1-219ENST00000556951 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
PSEN1-219ENST00000556951 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
PSEN1-219ENST00000556951 GLI2P10070 1586 aa22.8■■□□□ 1.24
PSEN1-219ENST00000556951 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
PSEN1-219ENST00000556951 RUSC2Q8N2Y8 1516 aa22.71■■□□□ 1.23
PSEN1-219ENST00000556951 SPATA31D1Q6ZQQ2 1576 aa22.69■■□□□ 1.22
PSEN1-219ENST00000556951 PLB1Q6P1J6 1458 aa22.66■■□□□ 1.22
PSEN1-219ENST00000556951 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
PSEN1-219ENST00000556951 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.22
PSEN1-219ENST00000556951 CERKQ8TCT0 537 aa22.64■■□□□ 1.21
PSEN1-219ENST00000556951 TEX14Q8IWB6 1497 aa22.64■■□□□ 1.21
PSEN1-219ENST00000556951 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
PSEN1-219ENST00000556951 ABCC2Q92887 1545 aa22.58■■□□□ 1.21
PSEN1-219ENST00000556951 KIAA0586Q9BVV6 1533 aa22.57■■□□□ 1.2
PSEN1-219ENST00000556951 PTPRMP28827 1452 aa22.56■■□□□ 1.2
PSEN1-219ENST00000556951 IGF1RP08069 1367 aa22.56■■□□□ 1.2
PSEN1-219ENST00000556951 KIF21BO75037 1637 aa22.56■■□□□ 1.2
PSEN1-219ENST00000556951 CUL7Q14999 1698 aa22.52■■□□□ 1.2
PSEN1-219ENST00000556951 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.19
PSEN1-219ENST00000556951 ADAMTSL3P82987 1691 aa22.49■■□□□ 1.19
PSEN1-219ENST00000556951 PTPRGP23470 1445 aa22.48■■□□□ 1.19
PSEN1-219ENST00000556951 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-219ENST00000556951 UHRF1BP1LA0JNW5 1464 aa22.38■■□□□ 1.17
PSEN1-219ENST00000556951 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
PSEN1-219ENST00000556951 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
PSEN1-219ENST00000556951 HSPA2P54652 639 aa22.34■■□□□ 1.17
PSEN1-219ENST00000556951 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
PSEN1-219ENST00000556951 KDM5BQ9UGL1 1544 aa22.3■■□□□ 1.16
PSEN1-219ENST00000556951 CARMIL2Q6F5E8 1435 aa22.3■■□□□ 1.16
PSEN1-219ENST00000556951 MADDQ8WXG6 1647 aa22.28■■□□□ 1.16
PSEN1-219ENST00000556951 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
PSEN1-219ENST00000556951 BCORL1Q5H9F3 1711 aa22.27■■□□□ 1.16
PSEN1-219ENST00000556951 UACAQ9BZF9 1416 aa22.27■■□□□ 1.16
PSEN1-219ENST00000556951 ZCCHC11Q5TAX3 1644 aaKnown RBP22.26■■□□□ 1.15
PSEN1-219ENST00000556951 DISP1Q96F81 1524 aa22.24■■□□□ 1.15
PSEN1-219ENST00000556951 CFAP43Q8NDM7 1665 aa22.23■■□□□ 1.15
PSEN1-219ENST00000556951 CD109Q6YHK3 1445 aa22.21■■□□□ 1.15
PSEN1-219ENST00000556951 IQGAP2Q13576 1575 aa22.21■■□□□ 1.15
PSEN1-219ENST00000556951 WDR7Q9Y4E6 1490 aa22.18■■□□□ 1.14
PSEN1-219ENST00000556951 RIMS1Q86UR5 1692 aaKnown RBP22.17■■□□□ 1.14
PSEN1-219ENST00000556951 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
PSEN1-219ENST00000556951 UGGT2Q9NYU1 1516 aa22.11■■□□□ 1.13
PSEN1-219ENST00000556951 ARID4BQ4LE39 1312 aaPredicted RBP22.06■■□□□ 1.12
PSEN1-219ENST00000556951 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
PSEN1-219ENST00000556951 KIAA0556O60303 1618 aa22.02■■□□□ 1.12
PSEN1-219ENST00000556951 KCNH8Q96L42 1107 aa22■■□□□ 1.11
PSEN1-219ENST00000556951 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
PSEN1-219ENST00000556951 STRCQ7RTU9 1775 aa21.99■■□□□ 1.11
PSEN1-219ENST00000556951 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
PSEN1-219ENST00000556951 YEATS2Q9ULM3 1422 aa21.98■■□□□ 1.11
PSEN1-219ENST00000556951 IQSEC2Q5JU85 1478 aa21.96■■□□□ 1.11
PSEN1-219ENST00000556951 RAPGEF3O95398 923 aa21.94■■□□□ 1.1
PSEN1-219ENST00000556951 PHLDB1Q86UU1 1377 aa21.93■■□□□ 1.1
PSEN1-219ENST00000556951 ABCA8O94911 1581 aa21.91■■□□□ 1.1
PSEN1-219ENST00000556951 PREX1Q8TCU6 1659 aa21.9■■□□□ 1.1
PSEN1-219ENST00000556951 LTBP4Q8N2S1 1624 aa21.89■■□□□ 1.09
PSEN1-219ENST00000556951 FRMPD1Q5SYB0 1578 aa21.88■■□□□ 1.09
PSEN1-219ENST00000556951 ARHGEF40Q8TER5 1519 aa21.85■■□□□ 1.09
PSEN1-219ENST00000556951 MED1Q15648 1581 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-219ENST00000556951 TTC37Q6PGP7 1564 aa21.83■■□□□ 1.09
PSEN1-219ENST00000556951 PTPRTO14522 1441 aa21.83■■□□□ 1.09
PSEN1-219ENST00000556951 GOLGA3Q08378 1498 aa21.82■■□□□ 1.08
PSEN1-219ENST00000556951 POGZQ7Z3K3 1410 aa21.81■■□□□ 1.08
PSEN1-219ENST00000556951 FER1L4A9Z1Z3 1794 aa21.81■■□□□ 1.08
PSEN1-219ENST00000556951 CTTNBP2Q8WZ74 1663 aa21.79■■□□□ 1.08
PSEN1-219ENST00000556951 NEO1Q92859 1461 aa21.78■■□□□ 1.08
PSEN1-219ENST00000556951 FANCAO15360 1455 aa21.77■■□□□ 1.08
PSEN1-219ENST00000556951 ATP10BO94823 1461 aa21.77■■□□□ 1.08
PSEN1-219ENST00000556951 SIGLEC1Q9BZZ2 1709 aa21.76■■□□□ 1.07
PSEN1-219ENST00000556951 ABCA9Q8IUA7 1624 aa21.76■■□□□ 1.07
PSEN1-219ENST00000556951 ARID3CA6NKF2 412 aa21.75■■□□□ 1.07
PSEN1-219ENST00000556951 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
PSEN1-219ENST00000556951 UBAP1LF5GYI3 381 aa21.71■■□□□ 1.07
PSEN1-219ENST00000556951 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
PSEN1-219ENST00000556951 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
PSEN1-219ENST00000556951 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
PSEN1-219ENST00000556951 AKNAQ7Z591 1439 aa21.67■■□□□ 1.06
PSEN1-219ENST00000556951 UHRF1BP1Q6BDS2 1440 aa21.66■■□□□ 1.06
PSEN1-219ENST00000556951 MLECQ14165 292 aa21.65■■□□□ 1.06
PSEN1-219ENST00000556951 CEBPAP49715 358 aaPredicted RBP21.62■■□□□ 1.05
PSEN1-219ENST00000556951 ARHGEF12Q9NZN5 1544 aa21.61■■□□□ 1.05
PSEN1-219ENST00000556951 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
PSEN1-219ENST00000556951 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
PSEN1-219ENST00000556951 FHOD3Q2V2M9 1422 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms