RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
TRAV15-201ENST00000556680 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
TRAV15-201ENST00000556680 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
TRAV15-201ENST00000556680 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
TRAV15-201ENST00000556680 SPRYD3Q8NCJ5 442 aa9.79□□□□□ -0.84
TRAV15-201ENST00000556680 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
TRAV15-201ENST00000556680 CHRM1P11229 460 aaPredicted RBP9.75□□□□□ -0.85
TRAV15-201ENST00000556680 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
TRAV15-201ENST00000556680 RNF25Q96BH1 459 aaPredicted RBP9.75□□□□□ -0.85
TRAV15-201ENST00000556680 HS6ST3Q8IZP7 471 aa9.74□□□□□ -0.85
TRAV15-201ENST00000556680 PYGBP11216 843 aa9.73□□□□□ -0.85
TRAV15-201ENST00000556680 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
TRAV15-201ENST00000556680 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
TRAV15-201ENST00000556680 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
TRAV15-201ENST00000556680 VGFO15240 615 aaPredicted RBP9.7□□□□□ -0.86
TRAV15-201ENST00000556680 STK25O00506 426 aa9.68□□□□□ -0.86
TRAV15-201ENST00000556680 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRAV15-201ENST00000556680 CHRDL2Q6WN34 429 aa9.64□□□□□ -0.87
TRAV15-201ENST00000556680 DNAJC5Q9H3Z4 198 aa9.63□□□□□ -0.87
TRAV15-201ENST00000556680 TSHZ2Q9NRE2 1034 aa9.63□□□□□ -0.87
TRAV15-201ENST00000556680 STK24Q9Y6E0 443 aa9.63□□□□□ -0.87
TRAV15-201ENST00000556680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.62□□□□□ -0.87
TRAV15-201ENST00000556680 PAK3O75914 559 aaPredicted RBP9.62□□□□□ -0.87
TRAV15-201ENST00000556680 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
TRAV15-201ENST00000556680 SGIP1Q9BQI5 828 aa9.62□□□□□ -0.87
TRAV15-201ENST00000556680 BCL11BQ9C0K0 894 aaPredicted RBP9.61□□□□□ -0.87
TRAV15-201ENST00000556680 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
TRAV15-201ENST00000556680 ZNF467Q7Z7K2 595 aaPredicted RBP9.6□□□□□ -0.87
TRAV15-201ENST00000556680 NKX1-1Q15270 411 aaPredicted RBP9.58□□□□□ -0.88
TRAV15-201ENST00000556680 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
TRAV15-201ENST00000556680 BCANQ96GW7 911 aa9.58□□□□□ -0.88
TRAV15-201ENST00000556680 GTPBP6O43824 516 aaPredicted RBP9.55□□□□□ -0.88
TRAV15-201ENST00000556680 RYDENQ9NUL5 291 aaKnown RBP9.55□□□□□ -0.88
TRAV15-201ENST00000556680 CCDC61Q9Y6R9 512 aa9.55□□□□□ -0.88
TRAV15-201ENST00000556680 PCDHB8Q9UN66 801 aa9.54□□□□□ -0.88
TRAV15-201ENST00000556680 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
TRAV15-201ENST00000556680 PDAP1Q13442 181 aaKnown RBP9.53□□□□□ -0.88
TRAV15-201ENST00000556680 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
TRAV15-201ENST00000556680 PSEN1P49768 467 aa9.49□□□□□ -0.89
TRAV15-201ENST00000556680 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
TRAV15-201ENST00000556680 MAP3K13O43283 966 aa9.46□□□□□ -0.9
TRAV15-201ENST00000556680 CD44P16070 742 aaKnown RBP9.46□□□□□ -0.9
TRAV15-201ENST00000556680 KIF12Q96FN5 646 aa9.46□□□□□ -0.9
TRAV15-201ENST00000556680 IFNL1Q8IU54 200 aa9.44□□□□□ -0.9
TRAV15-201ENST00000556680 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
TRAV15-201ENST00000556680 CABP2Q9NPB3 220 aa9.38□□□□□ -0.91
TRAV15-201ENST00000556680 NBR1Q14596 966 aa9.37□□□□□ -0.91
TRAV15-201ENST00000556680 EFCAB3Q8N7B9 438 aa9.35□□□□□ -0.91
TRAV15-201ENST00000556680 MFRPQ9BY79 579 aa9.35□□□□□ -0.91
TRAV15-201ENST00000556680 SOX12O15370 315 aa9.34□□□□□ -0.91
TRAV15-201ENST00000556680 NLRP6P59044 892 aa9.33□□□□□ -0.92
TRAV15-201ENST00000556680 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
TRAV15-201ENST00000556680 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
TRAV15-201ENST00000556680 WDR70Q9NW82 654 aa9.32□□□□□ -0.92
TRAV15-201ENST00000556680 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
TRAV15-201ENST00000556680 PHF8Q9UPP1 1060 aa9.29□□□□□ -0.92
TRAV15-201ENST00000556680 PRKCSHP14314 528 aaPredicted RBP9.28□□□□□ -0.92
TRAV15-201ENST00000556680 MS4A3Q96HJ5 214 aa9.27□□□□□ -0.93
TRAV15-201ENST00000556680 PPP1R37O75864 691 aa9.26□□□□□ -0.93
TRAV15-201ENST00000556680 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
TRAV15-201ENST00000556680 TPRNQ4KMQ1 711 aa9.26□□□□□ -0.93
TRAV15-201ENST00000556680 CADPS2Q86UW7 1296 aa9.26□□□□□ -0.93
TRAV15-201ENST00000556680 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
TRAV15-201ENST00000556680 HAX1O00165 279 aa9.25□□□□□ -0.93
TRAV15-201ENST00000556680 P3H3Q8IVL6 736 aa9.23□□□□□ -0.93
TRAV15-201ENST00000556680 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
TRAV15-201ENST00000556680 TIE1P35590 1138 aa9.2□□□□□ -0.94
TRAV15-201ENST00000556680 TTLL13PA6NNM8 815 aa9.17□□□□□ -0.94
TRAV15-201ENST00000556680 CLCN6P51797 869 aa9.17□□□□□ -0.94
TRAV15-201ENST00000556680 MS4A4AQ96JQ5 239 aa9.16□□□□□ -0.94
TRAV15-201ENST00000556680 GALR2O43603 387 aaPredicted RBP9.15□□□□□ -0.94
TRAV15-201ENST00000556680 PDE4AP27815 886 aa9.15□□□□□ -0.94
TRAV15-201ENST00000556680 BMP2KQ9NSY1 1161 aaPredicted RBP9.15□□□□□ -0.94
TRAV15-201ENST00000556680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.94
TRAV15-201ENST00000556680 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
TRAV15-201ENST00000556680 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
TRAV15-201ENST00000556680 EVX2Q03828 476 aa9.12□□□□□ -0.95
TRAV15-201ENST00000556680 E2F4Q16254 413 aa9.12□□□□□ -0.95
TRAV15-201ENST00000556680 LARP6Q9BRS8 491 aaKnown RBP9.12□□□□□ -0.95
TRAV15-201ENST00000556680 ARHGEF1Q92888 912 aaKnown RBP9.08□□□□□ -0.96
TRAV15-201ENST00000556680 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
TRAV15-201ENST00000556680 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
TRAV15-201ENST00000556680 DDX27Q96GQ7 796 aaKnown RBP9.06□□□□□ -0.96
TRAV15-201ENST00000556680 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
TRAV15-201ENST00000556680 CRISPLD2Q9H0B8 497 aa9.05□□□□□ -0.96
TRAV15-201ENST00000556680 ILDR1Q86SU0 546 aaPredicted RBP9.04□□□□□ -0.96
TRAV15-201ENST00000556680 ATMINO43313 823 aaPredicted RBP9.03□□□□□ -0.96
TRAV15-201ENST00000556680 DPY19L2Q6NUT2 758 aa9.03□□□□□ -0.96
TRAV15-201ENST00000556680 G3V3G9 751 aa9.02□□□□□ -0.97
TRAV15-201ENST00000556680 MFSD10Q14728 455 aa9.02□□□□□ -0.97
TRAV15-201ENST00000556680 OCEL1Q9H607 264 aa9.01□□□□□ -0.97
TRAV15-201ENST00000556680 IER5LQ5T953 404 aa9□□□□□ -0.97
TRAV15-201ENST00000556680 ASTLQ6HA08 431 aaPredicted RBP9□□□□□ -0.97
TRAV15-201ENST00000556680 GPHNQ9NQX3 736 aaPredicted RBP9□□□□□ -0.97
TRAV15-201ENST00000556680 GABBR2O75899 941 aa8.99□□□□□ -0.97
TRAV15-201ENST00000556680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRAV15-201ENST00000556680 PLCG2P16885 1265 aa8.98□□□□□ -0.97
TRAV15-201ENST00000556680 LMOD2Q6P5Q4 547 aa8.98□□□□□ -0.97
TRAV15-201ENST00000556680 MICALL2Q8IY33 904 aa8.98□□□□□ -0.97
TRAV15-201ENST00000556680 TMC2Q8TDI7 906 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms