RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 AEBP2Q6ZN18 517 aaPredicted RBP18.07■□□□□ 0.48
TRAV15-201ENST00000556680 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
TRAV15-201ENST00000556680 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
TRAV15-201ENST00000556680 SENP3Q9H4L4 574 aaPredicted RBP15.34■□□□□ 0.05
TRAV15-201ENST00000556680 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
TRAV15-201ENST00000556680 FOXD1Q16676 465 aa14.17□□□□□ -0.14
TRAV15-201ENST00000556680 ADRA2BP18089 450 aa13.95□□□□□ -0.18
TRAV15-201ENST00000556680 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
TRAV15-201ENST00000556680 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
TRAV15-201ENST00000556680 KCNA4P22459 653 aa13.2□□□□□ -0.3
TRAV15-201ENST00000556680 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
TRAV15-201ENST00000556680 MSH5O43196 834 aa12.95□□□□□ -0.34
TRAV15-201ENST00000556680 NCBP3Q53F19 620 aaKnown RBP12.92□□□□□ -0.34
TRAV15-201ENST00000556680 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
TRAV15-201ENST00000556680 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
TRAV15-201ENST00000556680 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
TRAV15-201ENST00000556680 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
TRAV15-201ENST00000556680 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
TRAV15-201ENST00000556680 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
TRAV15-201ENST00000556680 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
TRAV15-201ENST00000556680 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
TRAV15-201ENST00000556680 DMRT2Q9Y5R5 561 aa12.27□□□□□ -0.45
TRAV15-201ENST00000556680 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
TRAV15-201ENST00000556680 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
TRAV15-201ENST00000556680 ZBTB22O15209 634 aa12.11□□□□□ -0.47
TRAV15-201ENST00000556680 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
TRAV15-201ENST00000556680 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
TRAV15-201ENST00000556680 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
TRAV15-201ENST00000556680 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
TRAV15-201ENST00000556680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAV15-201ENST00000556680 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
TRAV15-201ENST00000556680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
TRAV15-201ENST00000556680 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
TRAV15-201ENST00000556680 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
TRAV15-201ENST00000556680 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
TRAV15-201ENST00000556680 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
TRAV15-201ENST00000556680 APLP2Q06481 763 aa11.3□□□□□ -0.6
TRAV15-201ENST00000556680 FKBP8Q14318 412 aa11.21□□□□□ -0.61
TRAV15-201ENST00000556680 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
TRAV15-201ENST00000556680 POTEDQ86YR6 584 aa11.14□□□□□ -0.63
TRAV15-201ENST00000556680 RNF39Q9H2S5 420 aa11.1□□□□□ -0.63
TRAV15-201ENST00000556680 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
TRAV15-201ENST00000556680 CAPN15O75808 1086 aa11.04□□□□□ -0.64
TRAV15-201ENST00000556680 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
TRAV15-201ENST00000556680 C1QBPQ07021 282 aaKnown RBP11.03□□□□□ -0.64
TRAV15-201ENST00000556680 POLA2Q14181 598 aa10.95□□□□□ -0.66
TRAV15-201ENST00000556680 FBLN2P98095 1184 aa10.93□□□□□ -0.66
TRAV15-201ENST00000556680 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
TRAV15-201ENST00000556680 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
TRAV15-201ENST00000556680 AMER1Q5JTC6 1135 aaPredicted RBP10.84□□□□□ -0.67
TRAV15-201ENST00000556680 ABCB7O75027 752 aa10.83□□□□□ -0.68
TRAV15-201ENST00000556680 RTN4Q9NQC3 1192 aaKnown RBP10.8□□□□□ -0.68
TRAV15-201ENST00000556680 ZBTB12Q9Y330 459 aaPredicted RBP10.8□□□□□ -0.68
TRAV15-201ENST00000556680 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
TRAV15-201ENST00000556680 DSG3P32926 999 aa10.7□□□□□ -0.7
TRAV15-201ENST00000556680 CACNB1Q02641 598 aaPredicted RBP10.63□□□□□ -0.71
TRAV15-201ENST00000556680 PROM2Q8N271 834 aa10.63□□□□□ -0.71
TRAV15-201ENST00000556680 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
TRAV15-201ENST00000556680 VASPP50552 380 aaPredicted RBP10.54□□□□□ -0.72
TRAV15-201ENST00000556680 OSCARQ8IYS5 282 aa10.52□□□□□ -0.73
TRAV15-201ENST00000556680 SPDYE2BA6NHP3 402 aa10.51□□□□□ -0.73
TRAV15-201ENST00000556680 SPDYE6P0CI01 402 aa10.51□□□□□ -0.73
TRAV15-201ENST00000556680 SPDYE2Q495Y8 402 aa10.51□□□□□ -0.73
TRAV15-201ENST00000556680 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRAV15-201ENST00000556680 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
TRAV15-201ENST00000556680 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
TRAV15-201ENST00000556680 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
TRAV15-201ENST00000556680 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
TRAV15-201ENST00000556680 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
TRAV15-201ENST00000556680 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
TRAV15-201ENST00000556680 MIER1Q8N108 512 aa10.31□□□□□ -0.76
TRAV15-201ENST00000556680 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
TRAV15-201ENST00000556680 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
TRAV15-201ENST00000556680 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
TRAV15-201ENST00000556680 DCAF8L2P0C7V8 631 aa10.22□□□□□ -0.77
TRAV15-201ENST00000556680 PKD2Q13563 968 aa10.19□□□□□ -0.78
TRAV15-201ENST00000556680 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
TRAV15-201ENST00000556680 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
TRAV15-201ENST00000556680 SPDYE1Q8NFV5 336 aaPredicted RBP10.14□□□□□ -0.79
TRAV15-201ENST00000556680 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
TRAV15-201ENST00000556680 CLEC11AQ9Y240 323 aa10.12□□□□□ -0.79
TRAV15-201ENST00000556680 CIZ1Q9ULV3 898 aaPredicted RBP10.09□□□□□ -0.79
TRAV15-201ENST00000556680 PRR29P0C7W0 189 aa10.07□□□□□ -0.8
TRAV15-201ENST00000556680 REM2Q8IYK8 340 aaPredicted RBP10.06□□□□□ -0.8
TRAV15-201ENST00000556680 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
TRAV15-201ENST00000556680 RGL2O15211 777 aa9.96□□□□□ -0.82
TRAV15-201ENST00000556680 GSE1Q14687 1217 aa9.96□□□□□ -0.82
TRAV15-201ENST00000556680 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
TRAV15-201ENST00000556680 DCAF8Q5TAQ9 597 aa9.95□□□□□ -0.82
TRAV15-201ENST00000556680 CREBZFQ9NS37 354 aa9.95□□□□□ -0.82
TRAV15-201ENST00000556680 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.94□□□□□ -0.82
TRAV15-201ENST00000556680 PITPNM1O00562 1244 aa9.93□□□□□ -0.82
TRAV15-201ENST00000556680 NUBP1P53384 320 aa9.92□□□□□ -0.82
TRAV15-201ENST00000556680 HAP1P54257 671 aaPredicted RBP9.92□□□□□ -0.82
TRAV15-201ENST00000556680 BBXQ8WY36 941 aaPredicted RBP9.92□□□□□ -0.82
TRAV15-201ENST00000556680 NPM1P06748 294 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAV15-201ENST00000556680 FAM212AQ96EL1 285 aa9.88□□□□□ -0.83
TRAV15-201ENST00000556680 CHGAP10645 457 aaKnown RBP9.86□□□□□ -0.83
TRAV15-201ENST00000556680 MNX1P50219 401 aaPredicted RBP9.86□□□□□ -0.83
TRAV15-201ENST00000556680 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms