RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 PPM1GO15355 546 aaPredicted RBP2.61□□□□□ -1.99
KTN1-224ENST00000556631 CHGAP10645 457 aaKnown RBP2.61□□□□□ -1.99
KTN1-224ENST00000556631 WWC1Q8IX03 1113 aa2.61□□□□□ -1.99
KTN1-224ENST00000556631 CCDC136Q96JN2 1154 aa2.61□□□□□ -1.99
KTN1-224ENST00000556631 BBXQ8WY36 941 aaPredicted RBP2.61□□□□□ -1.99
KTN1-224ENST00000556631 HOXD11P31277 338 aaPredicted RBP2.61□□□□□ -1.99
KTN1-224ENST00000556631 RSPH6AQ9H0K4 717 aa2.61□□□□□ -1.99
KTN1-224ENST00000556631 PPP1R1BQ9UD71 204 aaPredicted RBP2.61□□□□□ -1.99
KTN1-224ENST00000556631 CCDC97Q96F63 343 aaPredicted RBP2.6□□□□□ -1.99
KTN1-224ENST00000556631 LMOD2Q6P5Q4 547 aa2.6□□□□□ -1.99
KTN1-224ENST00000556631 PSMD1Q99460 953 aa2.6□□□□□ -1.99
KTN1-224ENST00000556631 CCDC180Q9P1Z9 1646 aa2.59□□□□□ -1.99
KTN1-224ENST00000556631 ZEB1P37275 1124 aaPredicted RBP2.59□□□□□ -1.99
KTN1-224ENST00000556631 FBXW7Q969H0 707 aa2.59□□□□□ -1.99
KTN1-224ENST00000556631 MYO15BQ96JP2 1530 aa2.59□□□□□ -1.99
KTN1-224ENST00000556631 RAD21O60216 631 aa2.59□□□□□ -2
KTN1-224ENST00000556631 FBLN2P98095 1184 aa2.59□□□□□ -2
KTN1-224ENST00000556631 ACIN1Q9UKV3 1341 aaKnown RBP2.58□□□□□ -2
KTN1-224ENST00000556631 PDE4CQ08493 712 aa2.58□□□□□ -2
KTN1-224ENST00000556631 RBM25P49756 843 aaKnown RBP2.58□□□□□ -2
KTN1-224ENST00000556631 P3H3Q8IVL6 736 aa2.58□□□□□ -2
KTN1-224ENST00000556631 RNF216Q9NWF9 866 aaPredicted RBP2.58□□□□□ -2
KTN1-224ENST00000556631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.58□□□□□ -2
KTN1-224ENST00000556631 HNRNPUL2Q1KMD3 747 aaKnown RBP2.58□□□□□ -2
KTN1-224ENST00000556631 TMCO4Q5TGY1 634 aa2.58□□□□□ -2
KTN1-224ENST00000556631 RYDENQ9NUL5 291 aaKnown RBP2.57□□□□□ -2
KTN1-224ENST00000556631 NCLP19338 710 aaKnown RBP2.57□□□□□ -2
KTN1-224ENST00000556631 E9PSI1 815 aa2.57□□□□□ -2
KTN1-224ENST00000556631 ZNF526Q8TF50 670 aaPredicted RBP2.57□□□□□ -2
KTN1-224ENST00000556631 SMYD5Q6GMV2 418 aa2.57□□□□□ -2
KTN1-224ENST00000556631 KCTD17Q8N5Z5 321 aa2.56□□□□□ -2
KTN1-224ENST00000556631 CLSPNQ9HAW4 1339 aa2.56□□□□□ -2
KTN1-224ENST00000556631 CLSTN1O94985 981 aa2.55□□□□□ -2
KTN1-224ENST00000556631 MYCNP04198 464 aaPredicted RBP2.55□□□□□ -2
KTN1-224ENST00000556631 MIER1Q8N108 512 aa2.55□□□□□ -2
KTN1-224ENST00000556631 ZBTB47Q9UFB7 747 aaPredicted RBP2.55□□□□□ -2
KTN1-224ENST00000556631 SPOCK2Q92563 424 aa2.55□□□□□ -2
KTN1-224ENST00000556631 PROM2Q8N271 834 aa2.55□□□□□ -2
KTN1-224ENST00000556631 NEFMP07197 916 aa2.54□□□□□ -2
KTN1-224ENST00000556631 PRM3Q9NNZ6 103 aa2.54□□□□□ -2
KTN1-224ENST00000556631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.54□□□□□ -26e-7■□□□□ 9.4
KTN1-224ENST00000556631 DMRT2Q9Y5R5 561 aa2.54□□□□□ -2
KTN1-224ENST00000556631 CENPBP07199 599 aaPredicted RBP2.53□□□□□ -2
KTN1-224ENST00000556631 VASPP50552 380 aaPredicted RBP2.53□□□□□ -2
KTN1-224ENST00000556631 BAZ1BQ9UIG0 1483 aaKnown RBP2.53□□□□□ -2
KTN1-224ENST00000556631 APBB1O00213 710 aa2.53□□□□□ -2
KTN1-224ENST00000556631 ATXN8OSP0DMR3 200 aa2.53□□□□□ -2
KTN1-224ENST00000556631 BRD2P25440 801 aaKnown RBP2.53□□□□□ -2
KTN1-224ENST00000556631 PATL2C9JE40 543 aaKnown RBP2.53□□□□□ -2.01
KTN1-224ENST00000556631 TSHZ2Q9NRE2 1034 aa2.52□□□□□ -2.01
KTN1-224ENST00000556631 SPDYE4A6NLX3 237 aa2.52□□□□□ -2.01
KTN1-224ENST00000556631 MKRN4PQ13434 485 aaPredicted RBP2.52□□□□□ -2.01
KTN1-224ENST00000556631 TRIM26Q12899 539 aaPredicted RBP2.52□□□□□ -2.01
KTN1-224ENST00000556631 PCDH10Q9P2E7 1040 aa2.51□□□□□ -2.01
KTN1-224ENST00000556631 ANP32CO43423 234 aa2.51□□□□□ -2.01
KTN1-224ENST00000556631 IBSPP21815 317 aaPredicted RBP2.51□□□□□ -2.01
KTN1-224ENST00000556631 ANP32EQ9BTT0 268 aa2.51□□□□□ -2.01
KTN1-224ENST00000556631 A0A0U1RQG5 324 aaPredicted RBP2.51□□□□□ -2.01
KTN1-224ENST00000556631 SAMD1Q6SPF0 538 aaPredicted RBP2.51□□□□□ -2.01
KTN1-224ENST00000556631 ZMYND15Q9H091 742 aa2.51□□□□□ -2.01
KTN1-224ENST00000556631 UBTFP17480 764 aaKnown RBP2.5□□□□□ -2.01
KTN1-224ENST00000556631 PPARGC1BQ86YN6 1023 aaKnown RBP2.5□□□□□ -2.01
KTN1-224ENST00000556631 NOL8Q76FK4 1167 aaKnown RBP2.49□□□□□ -2.01
KTN1-224ENST00000556631 NAP1L5Q96NT1 182 aaPredicted RBP2.49□□□□□ -2.01
KTN1-224ENST00000556631 PTMAP06454 111 aaKnown RBP2.49□□□□□ -2.01
KTN1-224ENST00000556631 HSP90AA1P07900 732 aaKnown RBP2.49□□□□□ -2.01
KTN1-224ENST00000556631 TAF7LQ5H9L4 462 aa2.49□□□□□ -2.01
KTN1-224ENST00000556631 TRIM41Q8WV44 630 aa2.49□□□□□ -2.01
KTN1-224ENST00000556631 TRIM63Q969Q1 353 aa2.49□□□□□ -2.01
KTN1-224ENST00000556631 STK11IPQ8N1F8 1099 aa2.49□□□□□ -2.01
KTN1-224ENST00000556631 PAF1Q8N7H5 531 aa2.49□□□□□ -2.01
KTN1-224ENST00000556631 CALRP27797 417 aaKnown RBP2.49□□□□□ -2.01
KTN1-224ENST00000556631 OS9Q13438 667 aaPredicted RBP2.49□□□□□ -2.01
KTN1-224ENST00000556631 TNNT2P45379 298 aaPredicted RBP2.48□□□□□ -2.01
KTN1-224ENST00000556631 DCAF8Q5TAQ9 597 aa2.48□□□□□ -2.01
KTN1-224ENST00000556631 GZF1Q9H116 711 aaPredicted RBP2.48□□□□□ -2.01
KTN1-224ENST00000556631 PKD2Q13563 968 aa2.48□□□□□ -2.01
KTN1-224ENST00000556631 GORABQ5T7V8 394 aa2.48□□□□□ -2.01
KTN1-224ENST00000556631 TRIM44Q96DX7 344 aaPredicted RBP2.48□□□□□ -2.01
KTN1-224ENST00000556631 SOX12O15370 315 aa2.48□□□□□ -2.01
KTN1-224ENST00000556631 CSB-PGBD3P0DP91 1061 aa2.48□□□□□ -2.01
KTN1-224ENST00000556631 RSPH4AQ5TD94 716 aa2.48□□□□□ -2.01
KTN1-224ENST00000556631 WDR78Q5VTH9 848 aa2.48□□□□□ -2.01
KTN1-224ENST00000556631 HIRIP3Q9BW71 556 aaPredicted RBP2.47□□□□□ -2.01
KTN1-224ENST00000556631 FLIIQ13045 1269 aa2.47□□□□□ -2.01
KTN1-224ENST00000556631 STK25O00506 426 aa2.47□□□□□ -2.01
KTN1-224ENST00000556631 ITGAEP38570 1179 aa2.47□□□□□ -2.01
KTN1-224ENST00000556631 AK7Q96M32 723 aa2.47□□□□□ -2.01
KTN1-224ENST00000556631 U3KPZ7 1027 aaPredicted RBP2.47□□□□□ -2.01
KTN1-224ENST00000556631 CANXP27824 592 aaKnown RBP2.47□□□□□ -2.01
KTN1-224ENST00000556631 IL27Q8NEV9 243 aa2.47□□□□□ -2.01
KTN1-224ENST00000556631 ANP32BQ92688 251 aaKnown RBP2.46□□□□□ -2.02
KTN1-224ENST00000556631 PLCD4Q9BRC7 762 aa2.46□□□□□ -2.02
KTN1-224ENST00000556631 TMX4Q9H1E5 349 aaPredicted RBP2.46□□□□□ -2.02
KTN1-224ENST00000556631 BCCIPQ9P287 314 aaKnown RBP eCLIP2.46□□□□□ -2.02
KTN1-224ENST00000556631 APPP05067 770 aa2.46□□□□□ -2.02
KTN1-224ENST00000556631 CHMP3Q9Y3E7 222 aa2.46□□□□□ -2.02
KTN1-224ENST00000556631 KDM2AQ9Y2K7 1162 aa2.46□□□□□ -2.02
KTN1-224ENST00000556631 PCMTD1Q96MG8 357 aaPredicted RBP2.46□□□□□ -2.02
KTN1-224ENST00000556631 RBM19Q9Y4C8 960 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms