RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
TUBB3-209ENST00000555609 FHAD1B1AJZ9 1412 aa23.65■■□□□ 1.38
TUBB3-209ENST00000555609 LRRC9Q6ZRR7 1453 aa23.58■■□□□ 1.36
TUBB3-209ENST00000555609 MYT1Q01538 1121 aa23.58■■□□□ 1.36
TUBB3-209ENST00000555609 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
TUBB3-209ENST00000555609 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
TUBB3-209ENST00000555609 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
TUBB3-209ENST00000555609 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
TUBB3-209ENST00000555609 CFAP43Q8NDM7 1665 aa23.52■■□□□ 1.36
TUBB3-209ENST00000555609 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.35
TUBB3-209ENST00000555609 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
TUBB3-209ENST00000555609 YTHDC1Q96MU7 727 aaKnown RBP23.49■■□□□ 1.35
TUBB3-209ENST00000555609 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
TUBB3-209ENST00000555609 CUL7Q14999 1698 aa23.48■■□□□ 1.35
TUBB3-209ENST00000555609 RAB3GAP2Q9H2M9 1393 aa23.48■■□□□ 1.35
TUBB3-209ENST00000555609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.48■■□□□ 1.35
TUBB3-209ENST00000555609 FYCO1Q9BQS8 1478 aa23.45■■□□□ 1.35
TUBB3-209ENST00000555609 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
TUBB3-209ENST00000555609 TOPBP1Q92547 1522 aa23.44■■□□□ 1.34
TUBB3-209ENST00000555609 CASKIN1Q8WXD9 1431 aa23.42■■□□□ 1.34
TUBB3-209ENST00000555609 TIMELESSQ9UNS1 1208 aa23.41■■□□□ 1.34
TUBB3-209ENST00000555609 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
TUBB3-209ENST00000555609 PCF11O94913 1555 aaKnown RBP23.41■■□□□ 1.34
TUBB3-209ENST00000555609 PHLDB1Q86UU1 1377 aa23.41■■□□□ 1.34
TUBB3-209ENST00000555609 WDR62O43379 1518 aa23.4■■□□□ 1.34
TUBB3-209ENST00000555609 MAPKBP1O60336 1514 aa23.4■■□□□ 1.34
TUBB3-209ENST00000555609 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
TUBB3-209ENST00000555609 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
TUBB3-209ENST00000555609 FMN1Q68DA7 1419 aa23.34■■□□□ 1.33
TUBB3-209ENST00000555609 ITGAEP38570 1179 aa23.34■■□□□ 1.33
TUBB3-209ENST00000555609 FHOD3Q2V2M9 1422 aa23.29■■□□□ 1.32
TUBB3-209ENST00000555609 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
TUBB3-209ENST00000555609 FAM50AQ14320 339 aaKnown RBP23.26■■□□□ 1.31
TUBB3-209ENST00000555609 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
TUBB3-209ENST00000555609 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
TUBB3-209ENST00000555609 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.31
TUBB3-209ENST00000555609 SAMD9Q5K651 1589 aa23.2■■□□□ 1.3
TUBB3-209ENST00000555609 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
TUBB3-209ENST00000555609 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
TUBB3-209ENST00000555609 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.29
TUBB3-209ENST00000555609 MTUS2Q5JR59 1369 aa23.11■■□□□ 1.29
TUBB3-209ENST00000555609 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
TUBB3-209ENST00000555609 HFM1A2PYH4 1435 aa23.1■■□□□ 1.29
TUBB3-209ENST00000555609 PPP1R15AO75807 674 aaPredicted RBP23.08■■□□□ 1.29
TUBB3-209ENST00000555609 SIN3AQ96ST3 1273 aa23.07■■□□□ 1.28
TUBB3-209ENST00000555609 EHBP1L1Q8N3D4 1523 aa23.07■■□□□ 1.28
TUBB3-209ENST00000555609 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
TUBB3-209ENST00000555609 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
TUBB3-209ENST00000555609 MYOM3Q5VTT5 1437 aa23.05■■□□□ 1.28
TUBB3-209ENST00000555609 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
TUBB3-209ENST00000555609 SUPT6HQ7KZ85 1726 aaKnown RBP23.03■■□□□ 1.28
TUBB3-209ENST00000555609 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
TUBB3-209ENST00000555609 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
TUBB3-209ENST00000555609 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
TUBB3-209ENST00000555609 NCOA2Q15596 1464 aa23.02■■□□□ 1.28
TUBB3-209ENST00000555609 PTPN23Q9H3S7 1636 aa23.01■■□□□ 1.27
TUBB3-209ENST00000555609 ARHGEF11O15085 1522 aa23■■□□□ 1.27
TUBB3-209ENST00000555609 SUPT16HQ9Y5B9 1047 aaKnown RBP22.99■■□□□ 1.27
TUBB3-209ENST00000555609 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
TUBB3-209ENST00000555609 UGGT2Q9NYU1 1516 aa22.97■■□□□ 1.27
TUBB3-209ENST00000555609 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
TUBB3-209ENST00000555609 TONSLQ96HA7 1378 aa22.96■■□□□ 1.27
TUBB3-209ENST00000555609 NAIPQ13075 1403 aa22.96■■□□□ 1.27
TUBB3-209ENST00000555609 PTPRKQ15262 1439 aa22.95■■□□□ 1.26
TUBB3-209ENST00000555609 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
TUBB3-209ENST00000555609 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
TUBB3-209ENST00000555609 AKNAQ7Z591 1439 aa22.93■■□□□ 1.26
TUBB3-209ENST00000555609 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
TUBB3-209ENST00000555609 HECW1Q76N89 1606 aa22.91■■□□□ 1.26
TUBB3-209ENST00000555609 MIA2Q96PC5 1412 aa22.87■■□□□ 1.25
TUBB3-209ENST00000555609 IQGAP2Q13576 1575 aa22.85■■□□□ 1.25
TUBB3-209ENST00000555609 ANP32CO43423 234 aa22.85■■□□□ 1.25
TUBB3-209ENST00000555609 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
TUBB3-209ENST00000555609 GCC2Q8IWJ2 1684 aa22.83■■□□□ 1.25
TUBB3-209ENST00000555609 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
TUBB3-209ENST00000555609 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
TUBB3-209ENST00000555609 EPRSP07814 1512 aaKnown RBP22.8■■□□□ 1.24
TUBB3-209ENST00000555609 KCNH8Q96L42 1107 aa22.79■■□□□ 1.24
TUBB3-209ENST00000555609 KDM5BQ9UGL1 1544 aa22.75■■□□□ 1.23
TUBB3-209ENST00000555609 ROCK1Q13464 1354 aa22.71■■□□□ 1.23
TUBB3-209ENST00000555609 FBLN2P98095 1184 aa22.67■■□□□ 1.22
TUBB3-209ENST00000555609 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
TUBB3-209ENST00000555609 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.22
TUBB3-209ENST00000555609 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
TUBB3-209ENST00000555609 DENND4BO75064 1496 aaPredicted RBP22.64■■□□□ 1.21
TUBB3-209ENST00000555609 NEFLP07196 543 aa22.62■■□□□ 1.21
TUBB3-209ENST00000555609 CHD1O14646 1710 aa22.62■■□□□ 1.21
TUBB3-209ENST00000555609 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
TUBB3-209ENST00000555609 MPHOSPH9Q99550 1183 aa22.61■■□□□ 1.21
TUBB3-209ENST00000555609 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
TUBB3-209ENST00000555609 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
TUBB3-209ENST00000555609 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
TUBB3-209ENST00000555609 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.21
TUBB3-209ENST00000555609 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.21
TUBB3-209ENST00000555609 DAPK1P53355 1430 aa22.58■■□□□ 1.2
TUBB3-209ENST00000555609 EIF4G2P78344 907 aaKnown RBP eCLIP22.58■■□□□ 1.2
TUBB3-209ENST00000555609 CHIC2Q9UKJ5 165 aa22.58■■□□□ 1.2
TUBB3-209ENST00000555609 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
TUBB3-209ENST00000555609 FKBP8Q14318 412 aa22.57■■□□□ 1.2
TUBB3-209ENST00000555609 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms