RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 SHROOM2Q13796 1616 aa16.49■□□□□ 0.23
PRKCH-203ENST00000552875 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
PRKCH-203ENST00000552875 CUX1P39880 1505 aa16.45■□□□□ 0.22
PRKCH-203ENST00000552875 SOCS7O14512 581 aa16.44■□□□□ 0.22
PRKCH-203ENST00000552875 JPH4Q96JJ6 628 aa16.43■□□□□ 0.22
PRKCH-203ENST00000552875 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
PRKCH-203ENST00000552875 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
PRKCH-203ENST00000552875 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
PRKCH-203ENST00000552875 TSPOAP1O95153 1857 aa16.39■□□□□ 0.21
PRKCH-203ENST00000552875 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
PRKCH-203ENST00000552875 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
PRKCH-203ENST00000552875 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
PRKCH-203ENST00000552875 DISP3Q9P2K9 1392 aa16.28■□□□□ 0.2
PRKCH-203ENST00000552875 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
PRKCH-203ENST00000552875 ILDR2Q71H61 639 aa16.25■□□□□ 0.19
PRKCH-203ENST00000552875 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
PRKCH-203ENST00000552875 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
PRKCH-203ENST00000552875 TEX14Q8IWB6 1497 aa16.22■□□□□ 0.19
PRKCH-203ENST00000552875 GLI2P10070 1586 aa16.21■□□□□ 0.19
PRKCH-203ENST00000552875 COL17A1Q9UMD9 1497 aaPredicted RBP16.19■□□□□ 0.18
PRKCH-203ENST00000552875 ASXL2Q76L83 1435 aa16.18■□□□□ 0.18
PRKCH-203ENST00000552875 RUSC2Q8N2Y8 1516 aa16.17■□□□□ 0.18
PRKCH-203ENST00000552875 PPRC1Q5VV67 1664 aaKnown RBP16.14■□□□□ 0.18
PRKCH-203ENST00000552875 ABCC2Q92887 1545 aa16.14■□□□□ 0.18
PRKCH-203ENST00000552875 PTPRGP23470 1445 aa16.14■□□□□ 0.17
PRKCH-203ENST00000552875 CERKQ8TCT0 537 aa16.09■□□□□ 0.17
PRKCH-203ENST00000552875 TTBK1Q5TCY1 1321 aaPredicted RBP16.08■□□□□ 0.16
PRKCH-203ENST00000552875 KIAA0586Q9BVV6 1533 aa16.08■□□□□ 0.16
PRKCH-203ENST00000552875 EPRSP07814 1512 aaKnown RBP16.05■□□□□ 0.16
PRKCH-203ENST00000552875 MAP3K4Q9Y6R4 1608 aa16.04■□□□□ 0.16
PRKCH-203ENST00000552875 PTPRMP28827 1452 aa16.03■□□□□ 0.16
PRKCH-203ENST00000552875 CARMIL2Q6F5E8 1435 aa16.03■□□□□ 0.16
PRKCH-203ENST00000552875 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
PRKCH-203ENST00000552875 PCF11O94913 1555 aaKnown RBP16.01■□□□□ 0.15
PRKCH-203ENST00000552875 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
PRKCH-203ENST00000552875 SPATA31D1Q6ZQQ2 1576 aa15.98■□□□□ 0.15
PRKCH-203ENST00000552875 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
PRKCH-203ENST00000552875 CUL7Q14999 1698 aa15.94■□□□□ 0.14
PRKCH-203ENST00000552875 KIF21BO75037 1637 aa15.94■□□□□ 0.14
PRKCH-203ENST00000552875 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
PRKCH-203ENST00000552875 KDM5BQ9UGL1 1544 aa15.92■□□□□ 0.14
PRKCH-203ENST00000552875 MAGI3Q5TCQ9 1506 aa15.91■□□□□ 0.14
PRKCH-203ENST00000552875 CD109Q6YHK3 1445 aa15.91■□□□□ 0.14
PRKCH-203ENST00000552875 WDR7Q9Y4E6 1490 aa15.88■□□□□ 0.13
PRKCH-203ENST00000552875 ADAMTSL3P82987 1691 aa15.87■□□□□ 0.13
PRKCH-203ENST00000552875 HSPA2P54652 639 aa15.87■□□□□ 0.13
PRKCH-203ENST00000552875 ARID4BQ4LE39 1312 aaPredicted RBP15.87■□□□□ 0.13
PRKCH-203ENST00000552875 ZCCHC11Q5TAX3 1644 aaKnown RBP15.81■□□□□ 0.12
PRKCH-203ENST00000552875 ARAP3Q8WWN8 1544 aa15.81■□□□□ 0.12
PRKCH-203ENST00000552875 KCNH8Q96L42 1107 aa15.81■□□□□ 0.12
PRKCH-203ENST00000552875 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
PRKCH-203ENST00000552875 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
PRKCH-203ENST00000552875 IGF1RP08069 1367 aa15.79■□□□□ 0.12
PRKCH-203ENST00000552875 PHLDB1Q86UU1 1377 aa15.79■□□□□ 0.12
PRKCH-203ENST00000552875 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
PRKCH-203ENST00000552875 BCORL1Q5H9F3 1711 aa15.75■□□□□ 0.11
PRKCH-203ENST00000552875 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
PRKCH-203ENST00000552875 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
PRKCH-203ENST00000552875 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
PRKCH-203ENST00000552875 DISP1Q96F81 1524 aa15.72■□□□□ 0.11
PRKCH-203ENST00000552875 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
PRKCH-203ENST00000552875 POGZQ7Z3K3 1410 aa15.69■□□□□ 0.1
PRKCH-203ENST00000552875 RAPGEF3O95398 923 aa15.69■□□□□ 0.1
PRKCH-203ENST00000552875 YEATS2Q9ULM3 1422 aa15.68■□□□□ 0.1
PRKCH-203ENST00000552875 RIMS1Q86UR5 1692 aaKnown RBP15.67■□□□□ 0.1
PRKCH-203ENST00000552875 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
PRKCH-203ENST00000552875 UGGT2Q9NYU1 1516 aa15.62■□□□□ 0.09
PRKCH-203ENST00000552875 IQSEC2Q5JU85 1478 aa15.61■□□□□ 0.09
PRKCH-203ENST00000552875 NEO1Q92859 1461 aa15.61■□□□□ 0.09
PRKCH-203ENST00000552875 FANCAO15360 1455 aa15.6■□□□□ 0.09
PRKCH-203ENST00000552875 KIAA0556O60303 1618 aa15.59■□□□□ 0.09
PRKCH-203ENST00000552875 ARHGEF40Q8TER5 1519 aa15.55■□□□□ 0.08
PRKCH-203ENST00000552875 PTPRTO14522 1441 aa15.55■□□□□ 0.08
PRKCH-203ENST00000552875 AKNAQ7Z591 1439 aa15.55■□□□□ 0.08
PRKCH-203ENST00000552875 MLECQ14165 292 aa15.52■□□□□ 0.08
PRKCH-203ENST00000552875 UHRF1BP1Q6BDS2 1440 aa15.51■□□□□ 0.07
PRKCH-203ENST00000552875 GOLGA3Q08378 1498 aa15.51■□□□□ 0.07
PRKCH-203ENST00000552875 PREX1Q8TCU6 1659 aa15.51■□□□□ 0.07
PRKCH-203ENST00000552875 UBAP1LF5GYI3 381 aa15.5■□□□□ 0.07
PRKCH-203ENST00000552875 DENND4BO75064 1496 aaPredicted RBP15.5■□□□□ 0.07
PRKCH-203ENST00000552875 ABCA9Q8IUA7 1624 aa15.5■□□□□ 0.07
PRKCH-203ENST00000552875 ABCA8O94911 1581 aa15.49■□□□□ 0.07
PRKCH-203ENST00000552875 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
PRKCH-203ENST00000552875 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
PRKCH-203ENST00000552875 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
PRKCH-203ENST00000552875 LTBP4Q8N2S1 1624 aa15.46■□□□□ 0.06
PRKCH-203ENST00000552875 FHOD3Q2V2M9 1422 aa15.45■□□□□ 0.06
PRKCH-203ENST00000552875 STRCQ7RTU9 1775 aa15.45■□□□□ 0.06
PRKCH-203ENST00000552875 EFCAB5A4FU69 1503 aa15.44■□□□□ 0.06
PRKCH-203ENST00000552875 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
PRKCH-203ENST00000552875 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
PRKCH-203ENST00000552875 RAPGEF2Q9Y4G8 1499 aa15.44■□□□□ 0.06
PRKCH-203ENST00000552875 MAGI2Q86UL8 1455 aa15.43■□□□□ 0.06
PRKCH-203ENST00000552875 FER1L4A9Z1Z3 1794 aa15.43■□□□□ 0.06
PRKCH-203ENST00000552875 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
PRKCH-203ENST00000552875 CEBPAP49715 358 aaPredicted RBP15.42■□□□□ 0.06
PRKCH-203ENST00000552875 MED1Q15648 1581 aaPredicted RBP15.41■□□□□ 0.06
PRKCH-203ENST00000552875 ATP10BO94823 1461 aa15.4■□□□□ 0.06
PRKCH-203ENST00000552875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
PRKCH-203ENST00000552875 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms