RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 SYNJ1O43426 1573 aa8.11□□□□□ -1.11
TMEM106C-220ENST00000552561 CNKSR2Q8WXI2 1034 aa8.11□□□□□ -1.11
TMEM106C-220ENST00000552561 GAPVD1Q14C86 1478 aa8.1□□□□□ -1.11
TMEM106C-220ENST00000552561 BIVM-ERCC5R4GMW8 1640 aa8.08□□□□□ -1.12
TMEM106C-220ENST00000552561 TOP2BQ02880 1626 aa8.07□□□□□ -1.12
TMEM106C-220ENST00000552561 ERCC6L2Q5T890 1561 aa8.07□□□□□ -1.12
TMEM106C-220ENST00000552561 FBLN2P98095 1184 aa8.07□□□□□ -1.12
TMEM106C-220ENST00000552561 RNF216Q9NWF9 866 aaPredicted RBP8.07□□□□□ -1.12
TMEM106C-220ENST00000552561 PBRM1Q86U86 1689 aa8.07□□□□□ -1.12
TMEM106C-220ENST00000552561 NUP160Q12769 1436 aa8.06□□□□□ -1.12
TMEM106C-220ENST00000552561 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
TMEM106C-220ENST00000552561 CHMP7Q8WUX9 453 aaPredicted RBP8.05□□□□□ -1.12
TMEM106C-220ENST00000552561 ERICH3Q5RHP9 1530 aa8.04□□□□□ -1.12
TMEM106C-220ENST00000552561 GRIN2AQ12879 1464 aa8.04□□□□□ -1.12
TMEM106C-220ENST00000552561 ADAMTS12P58397 1594 aa8.03□□□□□ -1.12
TMEM106C-220ENST00000552561 SHROOM2Q13796 1616 aa8.03□□□□□ -1.12
TMEM106C-220ENST00000552561 FHAD1B1AJZ9 1412 aa8.03□□□□□ -1.12
TMEM106C-220ENST00000552561 C1QBPQ07021 282 aaKnown RBP8.01□□□□□ -1.13
TMEM106C-220ENST00000552561 CEP170Q5SW79 1584 aa7.99□□□□□ -1.13
TMEM106C-220ENST00000552561 LMTK3Q96Q04 1460 aa7.99□□□□□ -1.13
TMEM106C-220ENST00000552561 FBXO41Q8TF61 875 aa7.96□□□□□ -1.14
TMEM106C-220ENST00000552561 KIF13AQ9H1H9 1805 aa7.96□□□□□ -1.14
TMEM106C-220ENST00000552561 KDM6BO15054 1643 aa7.96□□□□□ -1.14
TMEM106C-220ENST00000552561 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
TMEM106C-220ENST00000552561 HECW2Q9P2P5 1572 aa7.93□□□□□ -1.14
TMEM106C-220ENST00000552561 RUSC2Q8N2Y8 1516 aa7.93□□□□□ -1.14
TMEM106C-220ENST00000552561 KIAA0586Q9BVV6 1533 aa7.91□□□□□ -1.14
TMEM106C-220ENST00000552561 MAPKBP1O60336 1514 aa7.9□□□□□ -1.14
TMEM106C-220ENST00000552561 IGF1RP08069 1367 aa7.9□□□□□ -1.14
TMEM106C-220ENST00000552561 CUL7Q14999 1698 aa7.89□□□□□ -1.15
TMEM106C-220ENST00000552561 PRG4Q92954 1404 aaPredicted RBP7.89□□□□□ -1.15
TMEM106C-220ENST00000552561 JPH4Q96JJ6 628 aa7.89□□□□□ -1.15
TMEM106C-220ENST00000552561 KIF27Q86VH2 1401 aa7.88□□□□□ -1.15
TMEM106C-220ENST00000552561 KDM4FA0A1W2PPD8 638 aa7.88□□□□□ -1.15
TMEM106C-220ENST00000552561 SOCS7O14512 581 aa7.87□□□□□ -1.15
TMEM106C-220ENST00000552561 NCBP3Q53F19 620 aaKnown RBP7.87□□□□□ -1.15
TMEM106C-220ENST00000552561 ABCC10Q5T3U5 1492 aa7.86□□□□□ -1.15
TMEM106C-220ENST00000552561 ADGRL1O94910 1474 aa7.85□□□□□ -1.15
TMEM106C-220ENST00000552561 ADCY10Q96PN6 1610 aa7.83□□□□□ -1.16
TMEM106C-220ENST00000552561 NPM1P06748 294 aaKnown RBP eCLIP7.83□□□□□ -1.16
TMEM106C-220ENST00000552561 DIP2BQ9P265 1576 aa7.83□□□□□ -1.16
TMEM106C-220ENST00000552561 TSPOAP1O95153 1857 aa7.83□□□□□ -1.16
TMEM106C-220ENST00000552561 CARMIL1Q5VZK9 1371 aa7.82□□□□□ -1.16
TMEM106C-220ENST00000552561 UHRF1BP1LA0JNW5 1464 aa7.81□□□□□ -1.16
TMEM106C-220ENST00000552561 FAM69CQ0P6D2 419 aa7.81□□□□□ -1.16
TMEM106C-220ENST00000552561 DISP3Q9P2K9 1392 aa7.81□□□□□ -1.16
TMEM106C-220ENST00000552561 GLI2P10070 1586 aa7.79□□□□□ -1.16
TMEM106C-220ENST00000552561 IQGAP2Q13576 1575 aa7.79□□□□□ -1.16
TMEM106C-220ENST00000552561 ABCC2Q92887 1545 aa7.78□□□□□ -1.16
TMEM106C-220ENST00000552561 UGGT2Q9NYU1 1516 aa7.78□□□□□ -1.16
TMEM106C-220ENST00000552561 TNIKQ9UKE5 1360 aa7.78□□□□□ -1.16
TMEM106C-220ENST00000552561 DISP1Q96F81 1524 aa7.78□□□□□ -1.16
TMEM106C-220ENST00000552561 PTPRGP23470 1445 aa7.78□□□□□ -1.16
TMEM106C-220ENST00000552561 CARMIL2Q6F5E8 1435 aa7.78□□□□□ -1.16
TMEM106C-220ENST00000552561 NPM3O75607 178 aaKnown RBP7.77□□□□□ -1.17
TMEM106C-220ENST00000552561 KDM5BQ9UGL1 1544 aa7.77□□□□□ -1.17
TMEM106C-220ENST00000552561 RAPGEF2Q9Y4G8 1499 aa7.76□□□□□ -1.17
TMEM106C-220ENST00000552561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.76□□□□□ -1.17
TMEM106C-220ENST00000552561 PLB1Q6P1J6 1458 aa7.75□□□□□ -1.17
TMEM106C-220ENST00000552561 SPATA31D1Q6ZQQ2 1576 aa7.75□□□□□ -1.17
TMEM106C-220ENST00000552561 UACAQ9BZF9 1416 aa7.74□□□□□ -1.17
TMEM106C-220ENST00000552561 PRXQ9BXM0 1461 aa7.73□□□□□ -1.17
TMEM106C-220ENST00000552561 KIAA0556O60303 1618 aa7.72□□□□□ -1.17
TMEM106C-220ENST00000552561 PPRC1Q5VV67 1664 aaKnown RBP7.72□□□□□ -1.17
TMEM106C-220ENST00000552561 ASXL2Q76L83 1435 aa7.71□□□□□ -1.17
TMEM106C-220ENST00000552561 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
TMEM106C-220ENST00000552561 EPRSP07814 1512 aaKnown RBP7.69□□□□□ -1.18
TMEM106C-220ENST00000552561 GOLGA3Q08378 1498 aa7.68□□□□□ -1.18
TMEM106C-220ENST00000552561 ABCA8O94911 1581 aa7.68□□□□□ -1.18
TMEM106C-220ENST00000552561 CTTNBP2Q8WZ74 1663 aa7.68□□□□□ -1.18
TMEM106C-220ENST00000552561 ILDR2Q71H61 639 aa7.67□□□□□ -1.18
TMEM106C-220ENST00000552561 TEX14Q8IWB6 1497 aa7.67□□□□□ -1.18
TMEM106C-220ENST00000552561 MAGI3Q5TCQ9 1506 aa7.67□□□□□ -1.18
TMEM106C-220ENST00000552561 ZCCHC11Q5TAX3 1644 aaKnown RBP7.67□□□□□ -1.18
TMEM106C-220ENST00000552561 COL17A1Q9UMD9 1497 aaPredicted RBP7.66□□□□□ -1.18
TMEM106C-220ENST00000552561 WDR7Q9Y4E6 1490 aa7.66□□□□□ -1.18
TMEM106C-220ENST00000552561 CFAP43Q8NDM7 1665 aa7.63□□□□□ -1.19
TMEM106C-220ENST00000552561 SAMD9Q5K651 1589 aa7.63□□□□□ -1.19
TMEM106C-220ENST00000552561 EEA1Q15075 1411 aa7.62□□□□□ -1.19
TMEM106C-220ENST00000552561 PHLDB1Q86UU1 1377 aa7.61□□□□□ -1.19
TMEM106C-220ENST00000552561 U3KPZ7 1027 aaPredicted RBP7.61□□□□□ -1.19
TMEM106C-220ENST00000552561 PCF11O94913 1555 aaKnown RBP7.61□□□□□ -1.19
TMEM106C-220ENST00000552561 ARAP3Q8WWN8 1544 aa7.61□□□□□ -1.19
TMEM106C-220ENST00000552561 ATP10BO94823 1461 aa7.59□□□□□ -1.19
TMEM106C-220ENST00000552561 CD109Q6YHK3 1445 aa7.59□□□□□ -1.19
TMEM106C-220ENST00000552561 CSRNP3Q8WYN3 585 aa7.58□□□□□ -1.2
TMEM106C-220ENST00000552561 ABCA9Q8IUA7 1624 aa7.58□□□□□ -1.2
TMEM106C-220ENST00000552561 CERKQ8TCT0 537 aa7.57□□□□□ -1.2
TMEM106C-220ENST00000552561 KIF21BO75037 1637 aa7.56□□□□□ -1.2
TMEM106C-220ENST00000552561 NEO1Q92859 1461 aa7.55□□□□□ -1.2
TMEM106C-220ENST00000552561 NUP153P49790 1475 aaKnown RBP7.55□□□□□ -1.2
TMEM106C-220ENST00000552561 EFCAB5A4FU69 1503 aa7.54□□□□□ -1.2
TMEM106C-220ENST00000552561 RAPGEF6Q8TEU7 1601 aa7.54□□□□□ -1.2
TMEM106C-220ENST00000552561 SPINK5Q9NQ38 1064 aaPredicted RBP7.53□□□□□ -1.2
TMEM106C-220ENST00000552561 PTPRMP28827 1452 aa7.53□□□□□ -1.2
TMEM106C-220ENST00000552561 CAPN15O75808 1086 aa7.52□□□□□ -1.21
TMEM106C-220ENST00000552561 TTBK1Q5TCY1 1321 aaPredicted RBP7.52□□□□□ -1.21
TMEM106C-220ENST00000552561 KCNA4P22459 653 aa7.51□□□□□ -1.21
TMEM106C-220ENST00000552561 DSG3P32926 999 aa7.51□□□□□ -1.21
TMEM106C-220ENST00000552561 FAM9AQ8IZU1 332 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms