RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CEP164Q9UPV0 1460 aa15.08■□□□□ 0.01
TGFBR1-209ENST00000552516 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
TGFBR1-209ENST00000552516 HNRNPUQ00839 825 aaKnown RBP eCLIP15.07■□□□□ 0
TGFBR1-209ENST00000552516 FKBP8Q14318 412 aa15.07■□□□□ 0
TGFBR1-209ENST00000552516 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ -0
TGFBR1-209ENST00000552516 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
TGFBR1-209ENST00000552516 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
TGFBR1-209ENST00000552516 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
TGFBR1-209ENST00000552516 SMARCA4P51532 1647 aa15□□□□□ -0.01
TGFBR1-209ENST00000552516 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
TGFBR1-209ENST00000552516 EEA1Q15075 1411 aa14.97□□□□□ -0.01
TGFBR1-209ENST00000552516 CFDP1Q9UEE9 299 aaPredicted RBP14.95□□□□□ -0.02
TGFBR1-209ENST00000552516 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
TGFBR1-209ENST00000552516 FHOD3Q2V2M9 1422 aa14.95□□□□□ -0.02
TGFBR1-209ENST00000552516 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
TGFBR1-209ENST00000552516 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
TGFBR1-209ENST00000552516 CCNB3Q8WWL7 1395 aa14.92□□□□□ -0.02
TGFBR1-209ENST00000552516 VPS8Q8N3P4 1428 aa14.91□□□□□ -0.02
TGFBR1-209ENST00000552516 PLEKHD1A6NEE1 506 aa14.9□□□□□ -0.02
TGFBR1-209ENST00000552516 SMARCA2P51531 1590 aa14.89□□□□□ -0.03
TGFBR1-209ENST00000552516 MRS2Q9HD23 443 aa14.89□□□□□ -0.03
TGFBR1-209ENST00000552516 SLC24A1O60721 1099 aa14.89□□□□□ -0.03
TGFBR1-209ENST00000552516 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
TGFBR1-209ENST00000552516 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
TGFBR1-209ENST00000552516 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
TGFBR1-209ENST00000552516 NESP48681 1621 aa14.83□□□□□ -0.03
TGFBR1-209ENST00000552516 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.03
TGFBR1-209ENST00000552516 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
TGFBR1-209ENST00000552516 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
TGFBR1-209ENST00000552516 EIF4G2P78344 907 aaKnown RBP eCLIP14.79□□□□□ -0.049e-6■□□□□ 10.1
TGFBR1-209ENST00000552516 STAG3Q9UJ98 1225 aa14.79□□□□□ -0.04
TGFBR1-209ENST00000552516 TMC1Q8TDI8 760 aa14.79□□□□□ -0.04
TGFBR1-209ENST00000552516 MYT1Q01538 1121 aa14.79□□□□□ -0.04
TGFBR1-209ENST00000552516 TNNT2P45379 298 aaPredicted RBP14.77□□□□□ -0.04
TGFBR1-209ENST00000552516 ZNF644Q9H582 1327 aaPredicted RBP14.76□□□□□ -0.05
TGFBR1-209ENST00000552516 SUPT16HQ9Y5B9 1047 aaKnown RBP14.76□□□□□ -0.05
TGFBR1-209ENST00000552516 HNRNPMP52272 730 aaKnown RBP eCLIP14.75□□□□□ -0.059e-7■■□□□ 14.5
TGFBR1-209ENST00000552516 DCAF11Q8TEB1 546 aa14.74□□□□□ -0.05
TGFBR1-209ENST00000552516 MLECQ14165 292 aa14.74□□□□□ -0.05
TGFBR1-209ENST00000552516 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
TGFBR1-209ENST00000552516 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
TGFBR1-209ENST00000552516 IGF1RP08069 1367 aa14.73□□□□□ -0.05
TGFBR1-209ENST00000552516 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
TGFBR1-209ENST00000552516 NUTM2DQ5VT03 806 aaPredicted RBP14.72□□□□□ -0.05
TGFBR1-209ENST00000552516 CARD11Q9BXL7 1154 aa14.72□□□□□ -0.05
TGFBR1-209ENST00000552516 PDS5BQ9NTI5 1447 aa14.71□□□□□ -0.05
TGFBR1-209ENST00000552516 CC2D1BQ5T0F9 858 aaKnown RBP14.71□□□□□ -0.05
TGFBR1-209ENST00000552516 DAXXQ9UER7 740 aaPredicted RBP14.7□□□□□ -0.06
TGFBR1-209ENST00000552516 PKD2Q13563 968 aa14.7□□□□□ -0.06
TGFBR1-209ENST00000552516 AQRO60306 1485 aaKnown RBP eCLIP14.69□□□□□ -0.06
TGFBR1-209ENST00000552516 CANXP27824 592 aaKnown RBP14.69□□□□□ -0.06
TGFBR1-209ENST00000552516 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
TGFBR1-209ENST00000552516 NEUROD2Q15784 382 aa14.69□□□□□ -0.06
TGFBR1-209ENST00000552516 HSPA5P11021 654 aaKnown RBP14.68□□□□□ -0.06
TGFBR1-209ENST00000552516 SETD5Q9C0A6 1442 aa14.67□□□□□ -0.06
TGFBR1-209ENST00000552516 MPHOSPH9Q99550 1183 aa14.65□□□□□ -0.06
TGFBR1-209ENST00000552516 ESF1Q9H501 851 aaKnown RBP14.65□□□□□ -0.06
TGFBR1-209ENST00000552516 GGT6Q6P531 493 aa14.65□□□□□ -0.06
TGFBR1-209ENST00000552516 JPH4Q96JJ6 628 aa14.65□□□□□ -0.06
TGFBR1-209ENST00000552516 L3MBTL2Q969R5 705 aa14.64□□□□□ -0.07
TGFBR1-209ENST00000552516 FHAD1B1AJZ9 1412 aa14.64□□□□□ -0.07
TGFBR1-209ENST00000552516 DHX57Q6P158 1386 aaKnown RBP14.64□□□□□ -0.07
TGFBR1-209ENST00000552516 ARHGAP35Q9NRY4 1499 aa14.63□□□□□ -0.07
TGFBR1-209ENST00000552516 PPM1GO15355 546 aaPredicted RBP14.63□□□□□ -0.07
TGFBR1-209ENST00000552516 ARAP1Q96P48 1450 aa14.61□□□□□ -0.07
TGFBR1-209ENST00000552516 PHLDB1Q86UU1 1377 aa14.61□□□□□ -0.07
TGFBR1-209ENST00000552516 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
TGFBR1-209ENST00000552516 B4GALNT3Q6L9W6 998 aa14.58□□□□□ -0.08
TGFBR1-209ENST00000552516 ARID4BQ4LE39 1312 aaPredicted RBP14.58□□□□□ -0.08
TGFBR1-209ENST00000552516 SOX12O15370 315 aa14.57□□□□□ -0.08
TGFBR1-209ENST00000552516 CCDC136Q96JN2 1154 aa14.57□□□□□ -0.08
TGFBR1-209ENST00000552516 PPP1R15AO75807 674 aaPredicted RBP14.57□□□□□ -0.08
TGFBR1-209ENST00000552516 BICRAQ9NZM4 1560 aa14.57□□□□□ -0.08
TGFBR1-209ENST00000552516 KIF21BO75037 1637 aa14.56□□□□□ -0.08
TGFBR1-209ENST00000552516 STK26Q9P289 416 aa14.55□□□□□ -0.08
TGFBR1-209ENST00000552516 NBR1Q14596 966 aa14.55□□□□□ -0.08
TGFBR1-209ENST00000552516 NUP155O75694 1391 aa14.54□□□□□ -0.08
TGFBR1-209ENST00000552516 WDR43Q15061 677 aaKnown RBP eCLIP14.52□□□□□ -0.09
TGFBR1-209ENST00000552516 CUX1P39880 1505 aa14.51□□□□□ -0.09
TGFBR1-209ENST00000552516 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
TGFBR1-209ENST00000552516 C14orf37Q86TY3 774 aa14.5□□□□□ -0.09
TGFBR1-209ENST00000552516 GAPVD1Q14C86 1478 aa14.48□□□□□ -0.09
TGFBR1-209ENST00000552516 FMN1Q68DA7 1419 aa14.48□□□□□ -0.09
TGFBR1-209ENST00000552516 KIF3BO15066 747 aa14.47□□□□□ -0.09
TGFBR1-209ENST00000552516 ARXQ96QS3 562 aa14.47□□□□□ -0.09
TGFBR1-209ENST00000552516 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
TGFBR1-209ENST00000552516 NUTM2FA1L443 756 aa14.47□□□□□ -0.09
TGFBR1-209ENST00000552516 CYB5RLQ6IPT4 315 aa14.46□□□□□ -0.09
TGFBR1-209ENST00000552516 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
TGFBR1-209ENST00000552516 RTL5Q5HYW3 569 aaPredicted RBP14.43□□□□□ -0.1
TGFBR1-209ENST00000552516 KNSTRNQ9Y448 316 aa14.43□□□□□ -0.1
TGFBR1-209ENST00000552516 ST20-MTHFSA0A0A6YYL1 179 aa14.43□□□□□ -0.1
TGFBR1-209ENST00000552516 CFTRP13569 1480 aa14.42□□□□□ -0.1
TGFBR1-209ENST00000552516 LAS1LQ9Y4W2 734 aaKnown RBP14.42□□□□□ -0.1
TGFBR1-209ENST00000552516 NEFMP07197 916 aa14.39□□□□□ -0.11
TGFBR1-209ENST00000552516 FRAT1Q92837 279 aaPredicted RBP14.38□□□□□ -0.11
TGFBR1-209ENST00000552516 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
TGFBR1-209ENST00000552516 A0A0G2JS52 829 aa14.37□□□□□ -0.11
TGFBR1-209ENST00000552516 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
TGFBR1-209ENST00000552516 LMOD2Q6P5Q4 547 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms