RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
CDK4-211ENST00000552254 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
CDK4-211ENST00000552254 KDM6BO15054 1643 aa15.66■□□□□ 0.1
CDK4-211ENST00000552254 NUP160Q12769 1436 aa15.65■□□□□ 0.1
CDK4-211ENST00000552254 SHROOM2Q13796 1616 aa15.64■□□□□ 0.09
CDK4-211ENST00000552254 FAM69CQ0P6D2 419 aa15.63■□□□□ 0.09
CDK4-211ENST00000552254 ILDR2Q71H61 639 aa15.63■□□□□ 0.09
CDK4-211ENST00000552254 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
CDK4-211ENST00000552254 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
CDK4-211ENST00000552254 ABCC10Q5T3U5 1492 aa15.58■□□□□ 0.08
CDK4-211ENST00000552254 DIP2BQ9P265 1576 aa15.58■□□□□ 0.08
CDK4-211ENST00000552254 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
CDK4-211ENST00000552254 PRG4Q92954 1404 aaPredicted RBP15.56■□□□□ 0.08
CDK4-211ENST00000552254 IGF1RP08069 1367 aa15.54■□□□□ 0.08
CDK4-211ENST00000552254 MAPKBP1O60336 1514 aa15.53■□□□□ 0.08
CDK4-211ENST00000552254 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
CDK4-211ENST00000552254 JPH4Q96JJ6 628 aa15.52■□□□□ 0.08
CDK4-211ENST00000552254 CUL7Q14999 1698 aa15.51■□□□□ 0.07
CDK4-211ENST00000552254 DISP3Q9P2K9 1392 aa15.5■□□□□ 0.07
CDK4-211ENST00000552254 ADGRL1O94910 1474 aa15.49■□□□□ 0.07
CDK4-211ENST00000552254 ADCY10Q96PN6 1610 aa15.47■□□□□ 0.07
CDK4-211ENST00000552254 CHIC1Q5VXU3 224 aa15.45■□□□□ 0.06
CDK4-211ENST00000552254 CARMIL1Q5VZK9 1371 aa15.44■□□□□ 0.06
CDK4-211ENST00000552254 KIAA0586Q9BVV6 1533 aa15.43■□□□□ 0.06
CDK4-211ENST00000552254 TTBK1Q5TCY1 1321 aaPredicted RBP15.37■□□□□ 0.05
CDK4-211ENST00000552254 SPATA31D1Q6ZQQ2 1576 aa15.35■□□□□ 0.05
CDK4-211ENST00000552254 IQGAP2Q13576 1575 aa15.33■□□□□ 0.05
CDK4-211ENST00000552254 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
CDK4-211ENST00000552254 EEA1Q15075 1411 aa15.31■□□□□ 0.04
CDK4-211ENST00000552254 PPRC1Q5VV67 1664 aaKnown RBP15.29■□□□□ 0.04
CDK4-211ENST00000552254 PRXQ9BXM0 1461 aa15.29■□□□□ 0.04
CDK4-211ENST00000552254 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
CDK4-211ENST00000552254 PTPRGP23470 1445 aa15.28■□□□□ 0.04
CDK4-211ENST00000552254 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
CDK4-211ENST00000552254 FAM9AQ8IZU1 332 aaPredicted RBP15.25■□□□□ 0.03
CDK4-211ENST00000552254 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
CDK4-211ENST00000552254 CTTNBP2Q8WZ74 1663 aa15.25■□□□□ 0.03
CDK4-211ENST00000552254 TNIKQ9UKE5 1360 aa15.24■□□□□ 0.03
CDK4-211ENST00000552254 GLI2P10070 1586 aa15.24■□□□□ 0.03
CDK4-211ENST00000552254 PLB1Q6P1J6 1458 aa15.24■□□□□ 0.03
CDK4-211ENST00000552254 ASXL2Q76L83 1435 aa15.24■□□□□ 0.03
CDK4-211ENST00000552254 ABCC2Q92887 1545 aa15.22■□□□□ 0.03
CDK4-211ENST00000552254 TEX14Q8IWB6 1497 aa15.22■□□□□ 0.03
CDK4-211ENST00000552254 UGGT2Q9NYU1 1516 aa15.22■□□□□ 0.03
CDK4-211ENST00000552254 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
CDK4-211ENST00000552254 KIF21BO75037 1637 aa15.18■□□□□ 0.02
CDK4-211ENST00000552254 MAP3K4Q9Y6R4 1608 aa15.18■□□□□ 0.02
CDK4-211ENST00000552254 UACAQ9BZF9 1416 aa15.16■□□□□ 0.02
CDK4-211ENST00000552254 COL17A1Q9UMD9 1497 aaPredicted RBP15.14■□□□□ 0.01
CDK4-211ENST00000552254 UHRF1BP1LA0JNW5 1464 aa15.14■□□□□ 0.01
CDK4-211ENST00000552254 EPRSP07814 1512 aaKnown RBP15.12■□□□□ 0.01
CDK4-211ENST00000552254 ZCCHC11Q5TAX3 1644 aaKnown RBP15.12■□□□□ 0.01
CDK4-211ENST00000552254 KDM5BQ9UGL1 1544 aa15.09■□□□□ 0.01
CDK4-211ENST00000552254 P3H3Q8IVL6 736 aa15.08■□□□□ 0
CDK4-211ENST00000552254 GOLGA3Q08378 1498 aa15.08■□□□□ 0
CDK4-211ENST00000552254 ABCA8O94911 1581 aa15.04■□□□□ -0
CDK4-211ENST00000552254 RANGAP1P46060 587 aaPredicted RBP15.04■□□□□ -0
CDK4-211ENST00000552254 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
CDK4-211ENST00000552254 ARID3CA6NKF2 412 aa15.02■□□□□ -0
CDK4-211ENST00000552254 CFAP43Q8NDM7 1665 aa15.02□□□□□ -0.01
CDK4-211ENST00000552254 SAMD9Q5K651 1589 aa15.02□□□□□ -0.01
CDK4-211ENST00000552254 WDR7Q9Y4E6 1490 aa15.01□□□□□ -0.01
CDK4-211ENST00000552254 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
CDK4-211ENST00000552254 CERKQ8TCT0 537 aa15.01□□□□□ -0.01
CDK4-211ENST00000552254 CD109Q6YHK3 1445 aa14.98□□□□□ -0.01
CDK4-211ENST00000552254 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
CDK4-211ENST00000552254 MAGI3Q5TCQ9 1506 aa14.96□□□□□ -0.02
CDK4-211ENST00000552254 PCF11O94913 1555 aaKnown RBP14.95□□□□□ -0.02
CDK4-211ENST00000552254 PTPRMP28827 1452 aa14.95□□□□□ -0.02
CDK4-211ENST00000552254 EFCAB5A4FU69 1503 aa14.94□□□□□ -0.02
CDK4-211ENST00000552254 ATP10BO94823 1461 aa14.93□□□□□ -0.02
CDK4-211ENST00000552254 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
CDK4-211ENST00000552254 RAPGEF6Q8TEU7 1601 aa14.92□□□□□ -0.02
CDK4-211ENST00000552254 ADAMTSL3P82987 1691 aa14.91□□□□□ -0.02
CDK4-211ENST00000552254 ARID4BQ4LE39 1312 aaPredicted RBP14.9□□□□□ -0.02
CDK4-211ENST00000552254 ARHGAP35Q9NRY4 1499 aa14.89□□□□□ -0.03
CDK4-211ENST00000552254 MADDQ8WXG6 1647 aa14.88□□□□□ -0.03
CDK4-211ENST00000552254 BCORL1Q5H9F3 1711 aa14.87□□□□□ -0.03
CDK4-211ENST00000552254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
CDK4-211ENST00000552254 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
CDK4-211ENST00000552254 NUP153P49790 1475 aaKnown RBP14.86□□□□□ -0.03
CDK4-211ENST00000552254 RIMS1Q86UR5 1692 aaKnown RBP14.86□□□□□ -0.03
CDK4-211ENST00000552254 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
CDK4-211ENST00000552254 ARAP3Q8WWN8 1544 aa14.84□□□□□ -0.03
CDK4-211ENST00000552254 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.04
CDK4-211ENST00000552254 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
CDK4-211ENST00000552254 CLIP1P30622 1438 aa14.8□□□□□ -0.04
CDK4-211ENST00000552254 HSPA2P54652 639 aa14.79□□□□□ -0.04
CDK4-211ENST00000552254 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
CDK4-211ENST00000552254 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
CDK4-211ENST00000552254 PHLDB1Q86UU1 1377 aa14.76□□□□□ -0.05
CDK4-211ENST00000552254 RAPGEF3O95398 923 aa14.76□□□□□ -0.05
CDK4-211ENST00000552254 ATP1B4Q9UN42 357 aaPredicted RBP14.76□□□□□ -0.05
CDK4-211ENST00000552254 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
CDK4-211ENST00000552254 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
CDK4-211ENST00000552254 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
CDK4-211ENST00000552254 HECW1Q76N89 1606 aa14.74□□□□□ -0.05
CDK4-211ENST00000552254 ARHGEF40Q8TER5 1519 aa14.73□□□□□ -0.05
CDK4-211ENST00000552254 NEO1Q92859 1461 aa14.72□□□□□ -0.05
CDK4-211ENST00000552254 FRMPD1Q5SYB0 1578 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms