RNA–Protein interactions for RNA: ENST00000551873.5

CNOT2-234, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-234ENST00000551873 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
CNOT2-234ENST00000551873 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
CNOT2-234ENST00000551873 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-234ENST00000551873 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
CNOT2-234ENST00000551873 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
CNOT2-234ENST00000551873 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
CNOT2-234ENST00000551873 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
CNOT2-234ENST00000551873 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
CNOT2-234ENST00000551873 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
CNOT2-234ENST00000551873 PCF11O94913 1555 aaKnown RBP13.39□□□□□ -0.27
CNOT2-234ENST00000551873 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
CNOT2-234ENST00000551873 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
CNOT2-234ENST00000551873 SOGA1O94964 1423 aa13.35□□□□□ -0.27
CNOT2-234ENST00000551873 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
CNOT2-234ENST00000551873 PTPRMP28827 1452 aa13.29□□□□□ -0.28
CNOT2-234ENST00000551873 NUP160Q12769 1436 aa13.27□□□□□ -0.29
CNOT2-234ENST00000551873 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
CNOT2-234ENST00000551873 KIF21BO75037 1637 aa13.25□□□□□ -0.29
CNOT2-234ENST00000551873 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
CNOT2-234ENST00000551873 PRG4Q92954 1404 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-234ENST00000551873 HSPA2P54652 639 aa13.22□□□□□ -0.29
CNOT2-234ENST00000551873 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.29
CNOT2-234ENST00000551873 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.3
CNOT2-234ENST00000551873 GLI2P10070 1586 aa13.2□□□□□ -0.3
CNOT2-234ENST00000551873 FGD5Q6ZNL6 1462 aa13.2□□□□□ -0.3
CNOT2-234ENST00000551873 MSH5O43196 834 aa13.18□□□□□ -0.3
CNOT2-234ENST00000551873 KCNA4P22459 653 aa13.15□□□□□ -0.3
CNOT2-234ENST00000551873 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
CNOT2-234ENST00000551873 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
CNOT2-234ENST00000551873 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-234ENST00000551873 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
CNOT2-234ENST00000551873 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
CNOT2-234ENST00000551873 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
CNOT2-234ENST00000551873 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
CNOT2-234ENST00000551873 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
CNOT2-234ENST00000551873 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
CNOT2-234ENST00000551873 ASXL2Q76L83 1435 aa13.06□□□□□ -0.32
CNOT2-234ENST00000551873 PLB1Q6P1J6 1458 aa13.04□□□□□ -0.32
CNOT2-234ENST00000551873 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.32
CNOT2-234ENST00000551873 STRCQ7RTU9 1775 aa13□□□□□ -0.33
CNOT2-234ENST00000551873 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
CNOT2-234ENST00000551873 EPRSP07814 1512 aaKnown RBP12.99□□□□□ -0.33
CNOT2-234ENST00000551873 CUX1P39880 1505 aa12.99□□□□□ -0.33
CNOT2-234ENST00000551873 KIAA0586Q9BVV6 1533 aa12.99□□□□□ -0.33
CNOT2-234ENST00000551873 CUL7Q14999 1698 aa12.99□□□□□ -0.33
CNOT2-234ENST00000551873 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
CNOT2-234ENST00000551873 RUSC2Q8N2Y8 1516 aa12.97□□□□□ -0.33
CNOT2-234ENST00000551873 ABCC2Q92887 1545 aa12.97□□□□□ -0.33
CNOT2-234ENST00000551873 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
CNOT2-234ENST00000551873 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
CNOT2-234ENST00000551873 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
CNOT2-234ENST00000551873 YEATS2Q9ULM3 1422 aa12.9□□□□□ -0.34
CNOT2-234ENST00000551873 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
CNOT2-234ENST00000551873 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
CNOT2-234ENST00000551873 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
CNOT2-234ENST00000551873 CFAP43Q8NDM7 1665 aa12.84□□□□□ -0.35
CNOT2-234ENST00000551873 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
CNOT2-234ENST00000551873 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
CNOT2-234ENST00000551873 HSPA1LP34931 641 aa12.82□□□□□ -0.36
CNOT2-234ENST00000551873 PREX1Q8TCU6 1659 aa12.82□□□□□ -0.36
CNOT2-234ENST00000551873 PTPRGP23470 1445 aa12.81□□□□□ -0.36
CNOT2-234ENST00000551873 PTPRTO14522 1441 aa12.79□□□□□ -0.36
CNOT2-234ENST00000551873 ARID4BQ4LE39 1312 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-234ENST00000551873 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
CNOT2-234ENST00000551873 TTBK1Q5TCY1 1321 aaPredicted RBP12.77□□□□□ -0.37
CNOT2-234ENST00000551873 UHRF1BP1LA0JNW5 1464 aa12.77□□□□□ -0.37
CNOT2-234ENST00000551873 ZCCHC11Q5TAX3 1644 aaKnown RBP12.77□□□□□ -0.37
CNOT2-234ENST00000551873 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
CNOT2-234ENST00000551873 CD109Q6YHK3 1445 aa12.75□□□□□ -0.37
CNOT2-234ENST00000551873 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
CNOT2-234ENST00000551873 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
CNOT2-234ENST00000551873 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
CNOT2-234ENST00000551873 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
CNOT2-234ENST00000551873 TTC37Q6PGP7 1564 aa12.71□□□□□ -0.37
CNOT2-234ENST00000551873 WDR7Q9Y4E6 1490 aa12.71□□□□□ -0.38
CNOT2-234ENST00000551873 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
CNOT2-234ENST00000551873 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
CNOT2-234ENST00000551873 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
CNOT2-234ENST00000551873 UACAQ9BZF9 1416 aa12.68□□□□□ -0.38
CNOT2-234ENST00000551873 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
CNOT2-234ENST00000551873 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
CNOT2-234ENST00000551873 ARHGEF40Q8TER5 1519 aa12.64□□□□□ -0.39
CNOT2-234ENST00000551873 RAPGEF3O95398 923 aa12.64□□□□□ -0.39
CNOT2-234ENST00000551873 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
CNOT2-234ENST00000551873 SETD1BQ9UPS6 1966 aaKnown RBP12.63□□□□□ -0.39
CNOT2-234ENST00000551873 PIP4K2BP78356 416 aa12.62□□□□□ -0.39
CNOT2-234ENST00000551873 ZNF335Q9H4Z2 1342 aaPredicted RBP12.62□□□□□ -0.39
CNOT2-234ENST00000551873 POTEAQ6S8J7 498 aa12.6□□□□□ -0.39
CNOT2-234ENST00000551873 UHRF1BP1Q6BDS2 1440 aa12.6□□□□□ -0.39
CNOT2-234ENST00000551873 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
CNOT2-234ENST00000551873 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
CNOT2-234ENST00000551873 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
CNOT2-234ENST00000551873 POGZQ7Z3K3 1410 aa12.56□□□□□ -0.4
CNOT2-234ENST00000551873 CEBPAP49715 358 aaPredicted RBP12.56□□□□□ -0.4
CNOT2-234ENST00000551873 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
CNOT2-234ENST00000551873 FANCAO15360 1455 aa12.56□□□□□ -0.4
CNOT2-234ENST00000551873 NCOA1Q15788 1441 aa12.55□□□□□ -0.4
CNOT2-234ENST00000551873 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
CNOT2-234ENST00000551873 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
CNOT2-234ENST00000551873 MLECQ14165 292 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms