RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 FHAD1B1AJZ9 1412 aa15.45■□□□□ 0.06
RAB5B-206ENST00000549505 TIAM1Q13009 1591 aa15.44■□□□□ 0.06
RAB5B-206ENST00000549505 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
RAB5B-206ENST00000549505 FYCO1Q9BQS8 1478 aa15.42■□□□□ 0.06
RAB5B-206ENST00000549505 RRBP1Q9P2E9 1410 aaKnown RBP15.42■□□□□ 0.06
RAB5B-206ENST00000549505 CASKIN1Q8WXD9 1431 aa15.39■□□□□ 0.05
RAB5B-206ENST00000549505 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
RAB5B-206ENST00000549505 PCF11O94913 1555 aaKnown RBP15.37■□□□□ 0.05
RAB5B-206ENST00000549505 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
RAB5B-206ENST00000549505 UGGT2Q9NYU1 1516 aa15.36■□□□□ 0.05
RAB5B-206ENST00000549505 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
RAB5B-206ENST00000549505 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
RAB5B-206ENST00000549505 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.05
RAB5B-206ENST00000549505 LRRC9Q6ZRR7 1453 aa15.33■□□□□ 0.04
RAB5B-206ENST00000549505 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
RAB5B-206ENST00000549505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.3■□□□□ 0.04
RAB5B-206ENST00000549505 ZNF608Q9ULD9 1512 aaPredicted RBP15.29■□□□□ 0.04
RAB5B-206ENST00000549505 APLP2Q06481 763 aa15.28■□□□□ 0.04
RAB5B-206ENST00000549505 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.03
RAB5B-206ENST00000549505 LRRIQ1Q96JM4 1722 aa15.27■□□□□ 0.03
RAB5B-206ENST00000549505 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
RAB5B-206ENST00000549505 PPARGC1BQ86YN6 1023 aaKnown RBP15.25■□□□□ 0.03
RAB5B-206ENST00000549505 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
RAB5B-206ENST00000549505 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
RAB5B-206ENST00000549505 FHOD3Q2V2M9 1422 aa15.24■□□□□ 0.03
RAB5B-206ENST00000549505 KANK4Q5T7N3 995 aaPredicted RBP15.23■□□□□ 0.03
RAB5B-206ENST00000549505 SYNJ2O15056 1496 aa15.23■□□□□ 0.03
RAB5B-206ENST00000549505 CCDC18Q5T9S5 1454 aa15.21■□□□□ 0.03
RAB5B-206ENST00000549505 NUP160Q12769 1436 aa15.21■□□□□ 0.03
RAB5B-206ENST00000549505 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
RAB5B-206ENST00000549505 HECW1Q76N89 1606 aa15.2■□□□□ 0.02
RAB5B-206ENST00000549505 CCNB3Q8WWL7 1395 aa15.19■□□□□ 0.02
RAB5B-206ENST00000549505 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
RAB5B-206ENST00000549505 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
RAB5B-206ENST00000549505 EHBP1L1Q8N3D4 1523 aa15.17■□□□□ 0.02
RAB5B-206ENST00000549505 CEP170Q5SW79 1584 aa15.16■□□□□ 0.02
RAB5B-206ENST00000549505 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
RAB5B-206ENST00000549505 PHLDB1Q86UU1 1377 aa15.11■□□□□ 0.01
RAB5B-206ENST00000549505 TCOF1Q13428 1488 aaKnown RBP15.09■□□□□ 0.01
RAB5B-206ENST00000549505 EPRSP07814 1512 aaKnown RBP15.08■□□□□ 0
RAB5B-206ENST00000549505 MAGI3Q5TCQ9 1506 aa15.07■□□□□ 0
RAB5B-206ENST00000549505 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
RAB5B-206ENST00000549505 RAPGEF6Q8TEU7 1601 aa15.07■□□□□ 0
RAB5B-206ENST00000549505 SHROOM2Q13796 1616 aa15.06■□□□□ 0
RAB5B-206ENST00000549505 ADCY10Q96PN6 1610 aa15.05■□□□□ -0
RAB5B-206ENST00000549505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
RAB5B-206ENST00000549505 FGD6Q6ZV73 1430 aa15.04■□□□□ -0
RAB5B-206ENST00000549505 CCER1Q8TC90 406 aaPredicted RBP15.04■□□□□ -0
RAB5B-206ENST00000549505 NCOA2Q15596 1464 aa15.03■□□□□ -0
RAB5B-206ENST00000549505 MYOM3Q5VTT5 1437 aa15.03■□□□□ -0
RAB5B-206ENST00000549505 DHX57Q6P158 1386 aaKnown RBP15.02■□□□□ -0
RAB5B-206ENST00000549505 MIA2Q96PC5 1412 aa15.01□□□□□ -0.01
RAB5B-206ENST00000549505 ABCA8O94911 1581 aa15.01□□□□□ -0.01
RAB5B-206ENST00000549505 NUP153P49790 1475 aaKnown RBP15.01□□□□□ -0.01
RAB5B-206ENST00000549505 AKNAQ7Z591 1439 aa15□□□□□ -0.01
RAB5B-206ENST00000549505 PTPN23Q9H3S7 1636 aa14.98□□□□□ -0.01
RAB5B-206ENST00000549505 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
RAB5B-206ENST00000549505 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
RAB5B-206ENST00000549505 SETD5Q9C0A6 1442 aa14.96□□□□□ -0.01
RAB5B-206ENST00000549505 MTUS2Q5JR59 1369 aa14.96□□□□□ -0.02
RAB5B-206ENST00000549505 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
RAB5B-206ENST00000549505 CHD1O14646 1710 aa14.94□□□□□ -0.02
RAB5B-206ENST00000549505 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
RAB5B-206ENST00000549505 GCC2Q8IWJ2 1684 aa14.94□□□□□ -0.02
RAB5B-206ENST00000549505 HFM1A2PYH4 1435 aa14.93□□□□□ -0.02
RAB5B-206ENST00000549505 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
RAB5B-206ENST00000549505 CDK13Q14004 1512 aaKnown RBP14.92□□□□□ -0.02
RAB5B-206ENST00000549505 CLASP1Q7Z460 1538 aa14.91□□□□□ -0.02
RAB5B-206ENST00000549505 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
RAB5B-206ENST00000549505 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
RAB5B-206ENST00000549505 ITSN2Q9NZM3 1697 aa14.89□□□□□ -0.03
RAB5B-206ENST00000549505 TROQ12816 1431 aaPredicted RBP14.88□□□□□ -0.03
RAB5B-206ENST00000549505 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
RAB5B-206ENST00000549505 DNMT1P26358 1616 aaKnown RBP14.87□□□□□ -0.03
RAB5B-206ENST00000549505 PTPRKQ15262 1439 aa14.86□□□□□ -0.03
RAB5B-206ENST00000549505 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
RAB5B-206ENST00000549505 ROCK1Q13464 1354 aa14.84□□□□□ -0.03
RAB5B-206ENST00000549505 NAIPQ13075 1403 aa14.83□□□□□ -0.04
RAB5B-206ENST00000549505 PLB1Q6P1J6 1458 aa14.83□□□□□ -0.04
RAB5B-206ENST00000549505 ABCC10Q5T3U5 1492 aa14.82□□□□□ -0.04
RAB5B-206ENST00000549505 CROCC2H7BZ55 1655 aa14.82□□□□□ -0.04
RAB5B-206ENST00000549505 TIMELESSQ9UNS1 1208 aa14.81□□□□□ -0.04
RAB5B-206ENST00000549505 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
RAB5B-206ENST00000549505 UACAQ9BZF9 1416 aa14.8□□□□□ -0.04
RAB5B-206ENST00000549505 ATP10BO94823 1461 aa14.79□□□□□ -0.04
RAB5B-206ENST00000549505 ADGRL2O95490 1459 aa14.79□□□□□ -0.04
RAB5B-206ENST00000549505 PRG4Q92954 1404 aaPredicted RBP14.78□□□□□ -0.04
RAB5B-206ENST00000549505 ADGBQ8N7X0 1667 aa14.78□□□□□ -0.04
RAB5B-206ENST00000549505 KIF14Q15058 1648 aa14.77□□□□□ -0.04
RAB5B-206ENST00000549505 GPATCH8Q9UKJ3 1502 aaKnown RBP14.77□□□□□ -0.04
RAB5B-206ENST00000549505 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.05
RAB5B-206ENST00000549505 CDC42BPAQ5VT25 1732 aa14.76□□□□□ -0.05
RAB5B-206ENST00000549505 SHANK2Q9UPX8 1470 aa14.76□□□□□ -0.05
RAB5B-206ENST00000549505 DAPK1P53355 1430 aa14.75□□□□□ -0.05
RAB5B-206ENST00000549505 ABCC2Q92887 1545 aa14.75□□□□□ -0.05
RAB5B-206ENST00000549505 ARHGEF5Q12774 1597 aa14.74□□□□□ -0.05
RAB5B-206ENST00000549505 ABCC5O15440 1437 aa14.73□□□□□ -0.05
RAB5B-206ENST00000549505 ATP1B4Q9UN42 357 aaPredicted RBP14.72□□□□□ -0.05
RAB5B-206ENST00000549505 FAM50AQ14320 339 aaKnown RBP14.72□□□□□ -0.05
RAB5B-206ENST00000549505 ZNF316A6NFI3 1004 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms