RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 ARID4BQ4LE39 1312 aaPredicted RBP11.83□□□□□ -0.52
FGD6-205ENST00000549499 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
FGD6-205ENST00000549499 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
FGD6-205ENST00000549499 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
FGD6-205ENST00000549499 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
FGD6-205ENST00000549499 RAPGEF3O95398 923 aa11.73□□□□□ -0.53
FGD6-205ENST00000549499 IGF1RP08069 1367 aa11.73□□□□□ -0.53
FGD6-205ENST00000549499 GRIN2AQ12879 1464 aa11.72□□□□□ -0.53
FGD6-205ENST00000549499 PTPRGP23470 1445 aa11.72□□□□□ -0.53
FGD6-205ENST00000549499 TSPOAP1O95153 1857 aa11.7□□□□□ -0.54
FGD6-205ENST00000549499 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
FGD6-205ENST00000549499 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
FGD6-205ENST00000549499 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
FGD6-205ENST00000549499 HSPA2P54652 639 aa11.68□□□□□ -0.54
FGD6-205ENST00000549499 LOC105371045A0A1W2PR82 267 aa11.67□□□□□ -0.54
FGD6-205ENST00000549499 MAGI1Q96QZ7 1491 aaPredicted RBP11.66□□□□□ -0.54
FGD6-205ENST00000549499 KIF27Q86VH2 1401 aa11.66□□□□□ -0.54
FGD6-205ENST00000549499 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
FGD6-205ENST00000549499 CEP170Q5SW79 1584 aa11.63□□□□□ -0.55
FGD6-205ENST00000549499 ABCA10Q8WWZ4 1543 aa11.63□□□□□ -0.55
FGD6-205ENST00000549499 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
FGD6-205ENST00000549499 ILDR1Q86SU0 546 aaPredicted RBP11.61□□□□□ -0.55
FGD6-205ENST00000549499 CEBPAP49715 358 aaPredicted RBP11.6□□□□□ -0.55
FGD6-205ENST00000549499 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
FGD6-205ENST00000549499 PBRM1Q86U86 1689 aa11.53□□□□□ -0.56
FGD6-205ENST00000549499 SCAF1Q9H7N4 1312 aaKnown RBP11.52□□□□□ -0.57
FGD6-205ENST00000549499 ASXL2Q76L83 1435 aa11.51□□□□□ -0.57
FGD6-205ENST00000549499 CARMIL2Q6F5E8 1435 aa11.51□□□□□ -0.57
FGD6-205ENST00000549499 CLASP1Q7Z460 1538 aa11.51□□□□□ -0.57
FGD6-205ENST00000549499 TOP2BQ02880 1626 aa11.5□□□□□ -0.57
FGD6-205ENST00000549499 NUP160Q12769 1436 aa11.5□□□□□ -0.57
FGD6-205ENST00000549499 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
FGD6-205ENST00000549499 FHOD3Q2V2M9 1422 aa11.49□□□□□ -0.57
FGD6-205ENST00000549499 PLEKHD1A6NEE1 506 aa11.48□□□□□ -0.57
FGD6-205ENST00000549499 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
FGD6-205ENST00000549499 TNIKQ9UKE5 1360 aa11.48□□□□□ -0.57
FGD6-205ENST00000549499 COL17A1Q9UMD9 1497 aaPredicted RBP11.47□□□□□ -0.57
FGD6-205ENST00000549499 AFAP1Q8N556 730 aa11.47□□□□□ -0.57
FGD6-205ENST00000549499 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.58
FGD6-205ENST00000549499 RAPGEF2Q9Y4G8 1499 aa11.45□□□□□ -0.58
FGD6-205ENST00000549499 ITGAEP38570 1179 aa11.43□□□□□ -0.58
FGD6-205ENST00000549499 KIAA0586Q9BVV6 1533 aa11.43□□□□□ -0.58
FGD6-205ENST00000549499 GGT6Q6P531 493 aa11.41□□□□□ -0.58
FGD6-205ENST00000549499 UACAQ9BZF9 1416 aa11.41□□□□□ -0.58
FGD6-205ENST00000549499 ESF1Q9H501 851 aaKnown RBP11.4□□□□□ -0.58
FGD6-205ENST00000549499 CD109Q6YHK3 1445 aa11.4□□□□□ -0.58
FGD6-205ENST00000549499 ABCC10Q5T3U5 1492 aa11.37□□□□□ -0.59
FGD6-205ENST00000549499 ERICH3Q5RHP9 1530 aa11.37□□□□□ -0.59
FGD6-205ENST00000549499 HNRNPMP52272 730 aaKnown RBP eCLIP11.37□□□□□ -0.59
FGD6-205ENST00000549499 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
FGD6-205ENST00000549499 KDM6BO15054 1643 aa11.35□□□□□ -0.59
FGD6-205ENST00000549499 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
FGD6-205ENST00000549499 WDR97A6NE52 1622 aa11.33□□□□□ -0.6
FGD6-205ENST00000549499 ZNF644Q9H582 1327 aaPredicted RBP11.32□□□□□ -0.6
FGD6-205ENST00000549499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
FGD6-205ENST00000549499 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
FGD6-205ENST00000549499 DISP1Q96F81 1524 aa11.32□□□□□ -0.6
FGD6-205ENST00000549499 PIP4K2BP78356 416 aa11.31□□□□□ -0.6
FGD6-205ENST00000549499 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
FGD6-205ENST00000549499 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
FGD6-205ENST00000549499 IQGAP2Q13576 1575 aa11.31□□□□□ -0.6
FGD6-205ENST00000549499 ADGRL1O94910 1474 aa11.3□□□□□ -0.6
FGD6-205ENST00000549499 ABCC2Q92887 1545 aa11.29□□□□□ -0.6
FGD6-205ENST00000549499 BCANQ96GW7 911 aa11.26□□□□□ -0.61
FGD6-205ENST00000549499 CUL7Q14999 1698 aa11.26□□□□□ -0.61
FGD6-205ENST00000549499 CDK13Q14004 1512 aaKnown RBP11.25□□□□□ -0.61
FGD6-205ENST00000549499 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
FGD6-205ENST00000549499 ATP10BO94823 1461 aa11.24□□□□□ -0.61
FGD6-205ENST00000549499 EPRSP07814 1512 aaKnown RBP11.23□□□□□ -0.61
FGD6-205ENST00000549499 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
FGD6-205ENST00000549499 DIP2BQ9P265 1576 aa11.23□□□□□ -0.61
FGD6-205ENST00000549499 CFDP1Q9UEE9 299 aaPredicted RBP11.22□□□□□ -0.61
FGD6-205ENST00000549499 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
FGD6-205ENST00000549499 WDR7Q9Y4E6 1490 aa11.21□□□□□ -0.62
FGD6-205ENST00000549499 SCAPERQ9BY12 1400 aa11.21□□□□□ -0.62
FGD6-205ENST00000549499 YEATS2Q9ULM3 1422 aa11.21□□□□□ -0.62
FGD6-205ENST00000549499 EFCAB2Q5VUJ9 269 aa11.2□□□□□ -0.62
FGD6-205ENST00000549499 FBXO31Q5XUX0 539 aaPredicted RBP11.19□□□□□ -0.62
FGD6-205ENST00000549499 CHGAP10645 457 aaKnown RBP11.18□□□□□ -0.62
FGD6-205ENST00000549499 FAM50AQ14320 339 aaKnown RBP11.18□□□□□ -0.62
FGD6-205ENST00000549499 APLP2Q06481 763 aa11.18□□□□□ -0.62
FGD6-205ENST00000549499 KIF3BO15066 747 aa11.17□□□□□ -0.62
FGD6-205ENST00000549499 NCKAP5LQ9HCH0 1330 aa11.17□□□□□ -0.62
FGD6-205ENST00000549499 SHROOM2Q13796 1616 aa11.14□□□□□ -0.63
FGD6-205ENST00000549499 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
FGD6-205ENST00000549499 DISP3Q9P2K9 1392 aa11.14□□□□□ -0.63
FGD6-205ENST00000549499 KANK4Q5T7N3 995 aaPredicted RBP11.14□□□□□ -0.63
FGD6-205ENST00000549499 KIAA0556O60303 1618 aa11.14□□□□□ -0.63
FGD6-205ENST00000549499 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
FGD6-205ENST00000549499 RRP7BPQ9NSQ0 103 aa11.13□□□□□ -0.63
FGD6-205ENST00000549499 MTUS2Q5JR59 1369 aa11.12□□□□□ -0.63
FGD6-205ENST00000549499 UBAP1LF5GYI3 381 aa11.12□□□□□ -0.63
FGD6-205ENST00000549499 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
FGD6-205ENST00000549499 FANCAO15360 1455 aa11.1□□□□□ -0.63
FGD6-205ENST00000549499 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
FGD6-205ENST00000549499 ILDR2Q71H61 639 aa11.1□□□□□ -0.63
FGD6-205ENST00000549499 KDM5BQ9UGL1 1544 aa11.09□□□□□ -0.63
FGD6-205ENST00000549499 NUP153P49790 1475 aaKnown RBP11.09□□□□□ -0.63
FGD6-205ENST00000549499 SPAG9O60271 1321 aaKnown RBP11.09□□□□□ -0.63
FGD6-205ENST00000549499 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms