RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 KIAA0586Q9BVV6 1533 aa28.59■■■□□ 2.17
LETMD1-216ENST00000548401 IQGAP2Q13576 1575 aa28.54■■■□□ 2.16
LETMD1-216ENST00000548401 GOLGA3Q08378 1498 aa28.53■■■□□ 2.16
LETMD1-216ENST00000548401 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
LETMD1-216ENST00000548401 ARHGEF11O15085 1522 aa28.44■■■□□ 2.14
LETMD1-216ENST00000548401 RIMBP3CA6NJZ7 1639 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 RIMBP3BA6NNM3 1639 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 RIMBP3Q9UFD9 1639 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 UGGT2Q9NYU1 1516 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
LETMD1-216ENST00000548401 JPH4Q96JJ6 628 aa28.34■■■□□ 2.13
LETMD1-216ENST00000548401 PRG4Q92954 1404 aaPredicted RBP28.34■■■□□ 2.13
LETMD1-216ENST00000548401 DISP1Q96F81 1524 aa28.31■■■□□ 2.12
LETMD1-216ENST00000548401 EHMT2Q96KQ7 1210 aa28.29■■■□□ 2.12
LETMD1-216ENST00000548401 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
LETMD1-216ENST00000548401 SAMD9Q5K651 1589 aa28.27■■■□□ 2.12
LETMD1-216ENST00000548401 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
LETMD1-216ENST00000548401 UBTFP17480 764 aaKnown RBP28.22■■■□□ 2.11
LETMD1-216ENST00000548401 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
LETMD1-216ENST00000548401 CARMIL2Q6F5E8 1435 aa28.19■■■□□ 2.1
LETMD1-216ENST00000548401 EFCAB5A4FU69 1503 aa28.18■■■□□ 2.1
LETMD1-216ENST00000548401 LOC105371045A0A1W2PR82 267 aa28.09■■■□□ 2.09
LETMD1-216ENST00000548401 ARHGAP35Q9NRY4 1499 aa28.08■■■□□ 2.09
LETMD1-216ENST00000548401 FHOD3Q2V2M9 1422 aa28.02■■■□□ 2.08
LETMD1-216ENST00000548401 PTPRGP23470 1445 aa28.01■■■□□ 2.08
LETMD1-216ENST00000548401 CEP162Q5TB80 1403 aa28.01■■■□□ 2.07
LETMD1-216ENST00000548401 RANGAP1P46060 587 aaPredicted RBP28■■■□□ 2.07
LETMD1-216ENST00000548401 CLIP1P30622 1438 aa28■■■□□ 2.07
LETMD1-216ENST00000548401 CYB5RLQ6IPT4 315 aa27.96■■■□□ 2.07
LETMD1-216ENST00000548401 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
LETMD1-216ENST00000548401 ABCA8O94911 1581 aa27.94■■■□□ 2.06
LETMD1-216ENST00000548401 P3H3Q8IVL6 736 aa27.94■■■□□ 2.06
LETMD1-216ENST00000548401 ABCC2Q92887 1545 aa27.91■■■□□ 2.06
LETMD1-216ENST00000548401 PLB1Q6P1J6 1458 aa27.9■■■□□ 2.06
LETMD1-216ENST00000548401 UHRF1BP1LA0JNW5 1464 aa27.89■■■□□ 2.06
LETMD1-216ENST00000548401 UACAQ9BZF9 1416 aa27.88■■■□□ 2.05
LETMD1-216ENST00000548401 RAPGEF6Q8TEU7 1601 aa27.86■■■□□ 2.05
LETMD1-216ENST00000548401 TTBK1Q5TCY1 1321 aaPredicted RBP27.86■■■□□ 2.05
LETMD1-216ENST00000548401 FMN1Q68DA7 1419 aa27.83■■■□□ 2.05
LETMD1-216ENST00000548401 PCF11O94913 1555 aaKnown RBP27.79■■■□□ 2.04
LETMD1-216ENST00000548401 KDM5BQ9UGL1 1544 aa27.77■■■□□ 2.04
LETMD1-216ENST00000548401 NUP153P49790 1475 aaKnown RBP27.76■■■□□ 2.04
LETMD1-216ENST00000548401 ZCCHC11Q5TAX3 1644 aaKnown RBP27.74■■■□□ 2.03
LETMD1-216ENST00000548401 HECW1Q76N89 1606 aa27.73■■■□□ 2.03
LETMD1-216ENST00000548401 CASKIN1Q8WXD9 1431 aa27.69■■■□□ 2.02
LETMD1-216ENST00000548401 LRRIQ1Q96JM4 1722 aa27.69■■■□□ 2.02
LETMD1-216ENST00000548401 FYCO1Q9BQS8 1478 aa27.69■■■□□ 2.02
LETMD1-216ENST00000548401 MAPKBP1O60336 1514 aa27.68■■■□□ 2.02
LETMD1-216ENST00000548401 VPS8Q8N3P4 1428 aa27.65■■■□□ 2.02
LETMD1-216ENST00000548401 ATP10BO94823 1461 aa27.64■■■□□ 2.01
LETMD1-216ENST00000548401 EPRSP07814 1512 aaKnown RBP27.61■■■□□ 2.01
LETMD1-216ENST00000548401 CDK13Q14004 1512 aaKnown RBP27.61■■■□□ 2.01
LETMD1-216ENST00000548401 ASXL2Q76L83 1435 aa27.55■■■□□ 2
LETMD1-216ENST00000548401 CCDC18Q5T9S5 1454 aa27.55■■■□□ 2
LETMD1-216ENST00000548401 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
LETMD1-216ENST00000548401 ARID3CA6NKF2 412 aa27.52■■■□□ 2
LETMD1-216ENST00000548401 WDR7Q9Y4E6 1490 aa27.51■■■□□ 2
LETMD1-216ENST00000548401 CFAP43Q8NDM7 1665 aa27.5■■□□□ 1.99
LETMD1-216ENST00000548401 DIP2BQ9P265 1576 aa27.5■■□□□ 1.99
LETMD1-216ENST00000548401 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
LETMD1-216ENST00000548401 ABCC10Q5T3U5 1492 aa27.44■■□□□ 1.98
LETMD1-216ENST00000548401 MAGI3Q5TCQ9 1506 aa27.43■■□□□ 1.98
LETMD1-216ENST00000548401 ATP1B4Q9UN42 357 aaPredicted RBP27.43■■□□□ 1.98
LETMD1-216ENST00000548401 TIAM1Q13009 1591 aa27.42■■□□□ 1.98
LETMD1-216ENST00000548401 GLI2P10070 1586 aa27.39■■□□□ 1.98
LETMD1-216ENST00000548401 MAP3K1Q13233 1512 aa27.38■■□□□ 1.97
LETMD1-216ENST00000548401 TROQ12816 1431 aaPredicted RBP27.35■■□□□ 1.97
LETMD1-216ENST00000548401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
LETMD1-216ENST00000548401 HNRNPUL2Q1KMD3 747 aaKnown RBP27.35■■□□□ 1.97
LETMD1-216ENST00000548401 KIF14Q15058 1648 aa27.33■■□□□ 1.97
LETMD1-216ENST00000548401 ABCA9Q8IUA7 1624 aa27.32■■□□□ 1.96
LETMD1-216ENST00000548401 MAP3K4Q9Y6R4 1608 aa27.32■■□□□ 1.96
LETMD1-216ENST00000548401 EHBP1L1Q8N3D4 1523 aa27.31■■□□□ 1.96
LETMD1-216ENST00000548401 TTC37Q6PGP7 1564 aa27.29■■□□□ 1.96
LETMD1-216ENST00000548401 PLEKHD1A6NEE1 506 aa27.28■■□□□ 1.96
LETMD1-216ENST00000548401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.27■■□□□ 1.96
LETMD1-216ENST00000548401 CDK11AQ9UQ88 783 aaPredicted RBP27.26■■□□□ 1.95
LETMD1-216ENST00000548401 PPRC1Q5VV67 1664 aaKnown RBP27.24■■□□□ 1.95
LETMD1-216ENST00000548401 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
LETMD1-216ENST00000548401 FAM69CQ0P6D2 419 aa27.23■■□□□ 1.95
LETMD1-216ENST00000548401 MTUS2Q5JR59 1369 aa27.21■■□□□ 1.95
LETMD1-216ENST00000548401 KCNH8Q96L42 1107 aa27.2■■□□□ 1.94
LETMD1-216ENST00000548401 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
LETMD1-216ENST00000548401 SUPT6HQ7KZ85 1726 aaKnown RBP27.16■■□□□ 1.94
LETMD1-216ENST00000548401 TSPOAP1O95153 1857 aa27.16■■□□□ 1.94
LETMD1-216ENST00000548401 MYO5CQ9NQX4 1742 aa27.15■■□□□ 1.94
LETMD1-216ENST00000548401 CD109Q6YHK3 1445 aa27.14■■□□□ 1.93
LETMD1-216ENST00000548401 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
LETMD1-216ENST00000548401 PREX2Q70Z35 1606 aa27.12■■□□□ 1.93
LETMD1-216ENST00000548401 CDC42BPAQ5VT25 1732 aa27.12■■□□□ 1.93
LETMD1-216ENST00000548401 ARAP3Q8WWN8 1544 aa27.11■■□□□ 1.93
LETMD1-216ENST00000548401 NCOA2Q15596 1464 aa27.1■■□□□ 1.93
LETMD1-216ENST00000548401 APLP2Q06481 763 aa27.08■■□□□ 1.93
LETMD1-216ENST00000548401 CDC42BPBQ9Y5S2 1711 aa27.07■■□□□ 1.92
LETMD1-216ENST00000548401 TEX14Q8IWB6 1497 aa27.06■■□□□ 1.92
LETMD1-216ENST00000548401 PLCH2O75038 1416 aa27.05■■□□□ 1.92
LETMD1-216ENST00000548401 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
LETMD1-216ENST00000548401 CFAP74Q9C0B2 1584 aa27.03■■□□□ 1.92
LETMD1-216ENST00000548401 GPATCH8Q9UKJ3 1502 aaKnown RBP27.03■■□□□ 1.92
LETMD1-216ENST00000548401 ARHGAP5Q13017 1502 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms