RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 KCNH8Q96L42 1107 aa24.45■■□□□ 1.5
SEC23A-203ENST00000545328 PRDM2Q13029 1718 aa24.41■■□□□ 1.5
SEC23A-203ENST00000545328 HIRIP3Q9BW71 556 aaPredicted RBP24.4■■□□□ 1.5
SEC23A-203ENST00000545328 LRRC9Q6ZRR7 1453 aa24.39■■□□□ 1.5
SEC23A-203ENST00000545328 FHOD3Q2V2M9 1422 aa24.38■■□□□ 1.49
SEC23A-203ENST00000545328 MAPKBP1O60336 1514 aa24.38■■□□□ 1.49
SEC23A-203ENST00000545328 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
SEC23A-203ENST00000545328 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
SEC23A-203ENST00000545328 PCF11O94913 1555 aaKnown RBP24.33■■□□□ 1.49
SEC23A-203ENST00000545328 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.48
SEC23A-203ENST00000545328 SUPT16HQ9Y5B9 1047 aaKnown RBP24.32■■□□□ 1.48
SEC23A-203ENST00000545328 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
SEC23A-203ENST00000545328 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
SEC23A-203ENST00000545328 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
SEC23A-203ENST00000545328 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
SEC23A-203ENST00000545328 NESP48681 1621 aa24.26■■□□□ 1.47
SEC23A-203ENST00000545328 MAP3K1Q13233 1512 aa24.22■■□□□ 1.47
SEC23A-203ENST00000545328 POLA1P09884 1462 aaPredicted RBP24.19■■□□□ 1.46
SEC23A-203ENST00000545328 BCANQ96GW7 911 aa24.18■■□□□ 1.46
SEC23A-203ENST00000545328 CFAP43Q8NDM7 1665 aa24.17■■□□□ 1.46
SEC23A-203ENST00000545328 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
SEC23A-203ENST00000545328 DNMBPQ6XZF7 1577 aa24.11■■□□□ 1.45
SEC23A-203ENST00000545328 TDRD9Q8NDG6 1382 aaKnown RBP24.11■■□□□ 1.45
SEC23A-203ENST00000545328 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
SEC23A-203ENST00000545328 MTUS2Q5JR59 1369 aa24.09■■□□□ 1.45
SEC23A-203ENST00000545328 FYCO1Q9BQS8 1478 aa24.08■■□□□ 1.45
SEC23A-203ENST00000545328 CASKIN1Q8WXD9 1431 aa24.07■■□□□ 1.44
SEC23A-203ENST00000545328 PPP1R15AO75807 674 aaPredicted RBP24.05■■□□□ 1.44
SEC23A-203ENST00000545328 TRIM52Q96A61 297 aa24.04■■□□□ 1.44
SEC23A-203ENST00000545328 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
SEC23A-203ENST00000545328 FGD6Q6ZV73 1430 aa24.02■■□□□ 1.44
SEC23A-203ENST00000545328 TONSLQ96HA7 1378 aa24.01■■□□□ 1.43
SEC23A-203ENST00000545328 CTTNBP2Q8WZ74 1663 aa24■■□□□ 1.43
SEC23A-203ENST00000545328 EFCAB5A4FU69 1503 aa24■■□□□ 1.43
SEC23A-203ENST00000545328 FKBP8Q14318 412 aa23.99■■□□□ 1.43
SEC23A-203ENST00000545328 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
SEC23A-203ENST00000545328 PTPRKQ15262 1439 aa23.99■■□□□ 1.43
SEC23A-203ENST00000545328 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
SEC23A-203ENST00000545328 FMN1Q68DA7 1419 aa23.98■■□□□ 1.43
SEC23A-203ENST00000545328 CCDC18Q5T9S5 1454 aa23.97■■□□□ 1.43
SEC23A-203ENST00000545328 URB2Q14146 1524 aaKnown RBP23.96■■□□□ 1.43
SEC23A-203ENST00000545328 CUL7Q14999 1698 aa23.96■■□□□ 1.43
SEC23A-203ENST00000545328 ANP32CO43423 234 aa23.95■■□□□ 1.42
SEC23A-203ENST00000545328 BCL11AQ9H165 835 aa23.95■■□□□ 1.42
SEC23A-203ENST00000545328 RRP7BPQ9NSQ0 103 aa23.95■■□□□ 1.42
SEC23A-203ENST00000545328 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
SEC23A-203ENST00000545328 TSHZ2Q9NRE2 1034 aa23.94■■□□□ 1.42
SEC23A-203ENST00000545328 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.424e-7■■■■□ 22.1
SEC23A-203ENST00000545328 TIMELESSQ9UNS1 1208 aa23.9■■□□□ 1.42
SEC23A-203ENST00000545328 NCOA2Q15596 1464 aa23.89■■□□□ 1.41
SEC23A-203ENST00000545328 LRRIQ1Q96JM4 1722 aa23.89■■□□□ 1.41
SEC23A-203ENST00000545328 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
SEC23A-203ENST00000545328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.85■■□□□ 1.41
SEC23A-203ENST00000545328 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
SEC23A-203ENST00000545328 PTPN23Q9H3S7 1636 aa23.84■■□□□ 1.41
SEC23A-203ENST00000545328 MYOM3Q5VTT5 1437 aa23.83■■□□□ 1.41
SEC23A-203ENST00000545328 UACAQ9BZF9 1416 aa23.83■■□□□ 1.41
SEC23A-203ENST00000545328 NAIPQ13075 1403 aa23.82■■□□□ 1.4
SEC23A-203ENST00000545328 NEFLP07196 543 aa23.79■■□□□ 1.4
SEC23A-203ENST00000545328 GRIN2BQ13224 1484 aa23.78■■□□□ 1.4
SEC23A-203ENST00000545328 FOXD1Q16676 465 aa23.78■■□□□ 1.4
SEC23A-203ENST00000545328 SAMD9Q5K651 1589 aa23.77■■□□□ 1.4
SEC23A-203ENST00000545328 ABCA5Q8WWZ7 1642 aa23.76■■□□□ 1.39
SEC23A-203ENST00000545328 CCER2I3L3R5 266 aa23.75■■□□□ 1.39
SEC23A-203ENST00000545328 MAGI3Q5TCQ9 1506 aa23.75■■□□□ 1.39
SEC23A-203ENST00000545328 SUPT6HQ7KZ85 1726 aaKnown RBP23.75■■□□□ 1.39
SEC23A-203ENST00000545328 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
SEC23A-203ENST00000545328 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
SEC23A-203ENST00000545328 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
SEC23A-203ENST00000545328 HSPA5P11021 654 aaKnown RBP23.68■■□□□ 1.38
SEC23A-203ENST00000545328 HNRNPUQ00839 825 aaKnown RBP eCLIP23.68■■□□□ 1.38
SEC23A-203ENST00000545328 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
SEC23A-203ENST00000545328 IRX6P78412 446 aaPredicted RBP23.68■■□□□ 1.38
SEC23A-203ENST00000545328 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
SEC23A-203ENST00000545328 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
SEC23A-203ENST00000545328 PRKCSHP14314 528 aaPredicted RBP23.65■■□□□ 1.38
SEC23A-203ENST00000545328 KDM6BO15054 1643 aa23.65■■□□□ 1.38
SEC23A-203ENST00000545328 WASHC2AQ641Q2 1341 aa23.63■■□□□ 1.37
SEC23A-203ENST00000545328 CNGB1Q14028 1251 aaPredicted RBP23.61■■□□□ 1.37
SEC23A-203ENST00000545328 KDM5BQ9UGL1 1544 aa23.61■■□□□ 1.37
SEC23A-203ENST00000545328 MPHOSPH9Q99550 1183 aa23.61■■□□□ 1.37
SEC23A-203ENST00000545328 L3MBTL2Q969R5 705 aa23.59■■□□□ 1.37
SEC23A-203ENST00000545328 DENND4BO75064 1496 aaPredicted RBP23.58■■□□□ 1.37
SEC23A-203ENST00000545328 EPRSP07814 1512 aaKnown RBP23.57■■□□□ 1.36
SEC23A-203ENST00000545328 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
SEC23A-203ENST00000545328 ZNF644Q9H582 1327 aaPredicted RBP23.57■■□□□ 1.36
SEC23A-203ENST00000545328 CCDC184Q52MB2 194 aa23.56■■□□□ 1.36
SEC23A-203ENST00000545328 EIF4G2P78344 907 aaKnown RBP eCLIP23.56■■□□□ 1.36
SEC23A-203ENST00000545328 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
SEC23A-203ENST00000545328 HECW1Q76N89 1606 aa23.54■■□□□ 1.36
SEC23A-203ENST00000545328 ARHGEF11O15085 1522 aa23.53■■□□□ 1.36
SEC23A-203ENST00000545328 IQGAP2Q13576 1575 aa23.53■■□□□ 1.36
SEC23A-203ENST00000545328 C11orf95C9JLR9 678 aaPredicted RBP23.53■■□□□ 1.36
SEC23A-203ENST00000545328 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
SEC23A-203ENST00000545328 FAM9BQ8IZU0 186 aa23.5■■□□□ 1.35
SEC23A-203ENST00000545328 RBM19Q9Y4C8 960 aaKnown RBP23.49■■□□□ 1.35
SEC23A-203ENST00000545328 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
SEC23A-203ENST00000545328 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
SEC23A-203ENST00000545328 NBPF8Q3BBV2 869 aa23.46■■□□□ 1.35
SEC23A-203ENST00000545328 POLR3GLQ9BT43 218 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms