RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 MYT1Q01538 1121 aa23.16■■□□□ 1.3
SNRNP70-203ENST00000544278 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
SNRNP70-203ENST00000544278 SIN3AQ96ST3 1273 aa23.13■■□□□ 1.29
SNRNP70-203ENST00000544278 CENPBP07199 599 aaPredicted RBP23.12■■□□□ 1.29
SNRNP70-203ENST00000544278 PHLDB1Q86UU1 1377 aa23.12■■□□□ 1.29
SNRNP70-203ENST00000544278 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
SNRNP70-203ENST00000544278 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
SNRNP70-203ENST00000544278 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
SNRNP70-203ENST00000544278 RRBP1Q9P2E9 1410 aaKnown RBP23.03■■□□□ 1.28
SNRNP70-203ENST00000544278 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
SNRNP70-203ENST00000544278 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
SNRNP70-203ENST00000544278 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
SNRNP70-203ENST00000544278 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
SNRNP70-203ENST00000544278 PCF11O94913 1555 aaKnown RBP22.95■■□□□ 1.26
SNRNP70-203ENST00000544278 TIAM1Q13009 1591 aa22.95■■□□□ 1.26
SNRNP70-203ENST00000544278 CHIC2Q9UKJ5 165 aa22.93■■□□□ 1.26
SNRNP70-203ENST00000544278 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
SNRNP70-203ENST00000544278 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
SNRNP70-203ENST00000544278 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.255e-16■■■□□ 15.5
SNRNP70-203ENST00000544278 SLC24A1O60721 1099 aa22.86■■□□□ 1.25
SNRNP70-203ENST00000544278 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
SNRNP70-203ENST00000544278 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
SNRNP70-203ENST00000544278 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
SNRNP70-203ENST00000544278 SETD5Q9C0A6 1442 aa22.83■■□□□ 1.25
SNRNP70-203ENST00000544278 RRP7BPQ9NSQ0 103 aa22.82■■□□□ 1.24
SNRNP70-203ENST00000544278 DDX10Q13206 875 aaKnown RBP22.8■■□□□ 1.24
SNRNP70-203ENST00000544278 FBLN2P98095 1184 aa22.8■■□□□ 1.24
SNRNP70-203ENST00000544278 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
SNRNP70-203ENST00000544278 CLSPNQ9HAW4 1339 aa22.75■■□□□ 1.23
SNRNP70-203ENST00000544278 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
SNRNP70-203ENST00000544278 MAPKBP1O60336 1514 aa22.74■■□□□ 1.23
SNRNP70-203ENST00000544278 CASKIN1Q8WXD9 1431 aa22.71■■□□□ 1.23
SNRNP70-203ENST00000544278 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
SNRNP70-203ENST00000544278 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
SNRNP70-203ENST00000544278 FOXD1Q16676 465 aa22.69■■□□□ 1.22
SNRNP70-203ENST00000544278 TRIM52Q96A61 297 aa22.68■■□□□ 1.22
SNRNP70-203ENST00000544278 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
SNRNP70-203ENST00000544278 ZNF608Q9ULD9 1512 aaPredicted RBP22.65■■□□□ 1.22
SNRNP70-203ENST00000544278 FYCO1Q9BQS8 1478 aa22.64■■□□□ 1.22
SNRNP70-203ENST00000544278 WDR97A6NE52 1622 aa22.64■■□□□ 1.22
SNRNP70-203ENST00000544278 FGD6Q6ZV73 1430 aa22.64■■□□□ 1.21
SNRNP70-203ENST00000544278 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
SNRNP70-203ENST00000544278 CUL7Q14999 1698 aa22.6■■□□□ 1.21
SNRNP70-203ENST00000544278 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
SNRNP70-203ENST00000544278 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.21
SNRNP70-203ENST00000544278 NCOA2Q15596 1464 aa22.58■■□□□ 1.21
SNRNP70-203ENST00000544278 MAP3K1Q13233 1512 aa22.58■■□□□ 1.2
SNRNP70-203ENST00000544278 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
SNRNP70-203ENST00000544278 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
SNRNP70-203ENST00000544278 EFCAB5A4FU69 1503 aa22.55■■□□□ 1.2
SNRNP70-203ENST00000544278 CDK13Q14004 1512 aaKnown RBP22.55■■□□□ 1.2
SNRNP70-203ENST00000544278 CNGB1Q14028 1251 aaPredicted RBP22.54■■□□□ 1.2
SNRNP70-203ENST00000544278 ZNF777Q9ULD5 760 aaPredicted RBP22.53■■□□□ 1.2
SNRNP70-203ENST00000544278 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
SNRNP70-203ENST00000544278 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.2
SNRNP70-203ENST00000544278 TONSLQ96HA7 1378 aa22.52■■□□□ 1.2
SNRNP70-203ENST00000544278 LRRIQ1Q96JM4 1722 aa22.51■■□□□ 1.19
SNRNP70-203ENST00000544278 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
SNRNP70-203ENST00000544278 BCANQ96GW7 911 aa22.5■■□□□ 1.19
SNRNP70-203ENST00000544278 TARBP1Q13395 1621 aaKnown RBP22.48■■□□□ 1.19
SNRNP70-203ENST00000544278 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
SNRNP70-203ENST00000544278 MYOM3Q5VTT5 1437 aa22.47■■□□□ 1.19
SNRNP70-203ENST00000544278 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
SNRNP70-203ENST00000544278 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
SNRNP70-203ENST00000544278 NAIPQ13075 1403 aa22.42■■□□□ 1.18
SNRNP70-203ENST00000544278 MRC2Q9UBG0 1479 aa22.42■■□□□ 1.18
SNRNP70-203ENST00000544278 SAMD9Q5K651 1589 aa22.41■■□□□ 1.18
SNRNP70-203ENST00000544278 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
SNRNP70-203ENST00000544278 IQGAP2Q13576 1575 aa22.35■■□□□ 1.17
SNRNP70-203ENST00000544278 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
SNRNP70-203ENST00000544278 HFM1A2PYH4 1435 aa22.35■■□□□ 1.17
SNRNP70-203ENST00000544278 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
SNRNP70-203ENST00000544278 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
SNRNP70-203ENST00000544278 PTPN23Q9H3S7 1636 aa22.32■■□□□ 1.16
SNRNP70-203ENST00000544278 SUPT16HQ9Y5B9 1047 aaKnown RBP22.32■■□□□ 1.16
SNRNP70-203ENST00000544278 MPHOSPH9Q99550 1183 aa22.31■■□□□ 1.16
SNRNP70-203ENST00000544278 KDM6BO15054 1643 aa22.31■■□□□ 1.16
SNRNP70-203ENST00000544278 SENP3-EIF4A1A0A087X0R7 540 aa22.31■■□□□ 1.16
SNRNP70-203ENST00000544278 POLR3GLQ9BT43 218 aa22.31■■□□□ 1.16
SNRNP70-203ENST00000544278 UACAQ9BZF9 1416 aa22.3■■□□□ 1.16
SNRNP70-203ENST00000544278 SUPT6HQ7KZ85 1726 aaKnown RBP22.3■■□□□ 1.16
SNRNP70-203ENST00000544278 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
SNRNP70-203ENST00000544278 PRG4Q92954 1404 aaPredicted RBP22.28■■□□□ 1.16
SNRNP70-203ENST00000544278 ANP32CO43423 234 aa22.28■■□□□ 1.16
SNRNP70-203ENST00000544278 L3MBTL2Q969R5 705 aa22.28■■□□□ 1.16
SNRNP70-203ENST00000544278 EHBP1L1Q8N3D4 1523 aa22.27■■□□□ 1.16
SNRNP70-203ENST00000544278 UGGT2Q9NYU1 1516 aa22.27■■□□□ 1.16
SNRNP70-203ENST00000544278 HSPA5P11021 654 aaKnown RBP22.26■■□□□ 1.15
SNRNP70-203ENST00000544278 PLB1Q6P1J6 1458 aa22.25■■□□□ 1.15
SNRNP70-203ENST00000544278 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
SNRNP70-203ENST00000544278 CFDP1Q9UEE9 299 aaPredicted RBP22.25■■□□□ 1.15
SNRNP70-203ENST00000544278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.25■■□□□ 1.157e-8■□□□□ 10.2
SNRNP70-203ENST00000544278 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
SNRNP70-203ENST00000544278 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
SNRNP70-203ENST00000544278 IFT140Q96RY7 1462 aa22.21■■□□□ 1.15
SNRNP70-203ENST00000544278 DISP1Q96F81 1524 aa22.2■■□□□ 1.14
SNRNP70-203ENST00000544278 HECW1Q76N89 1606 aa22.19■■□□□ 1.14
SNRNP70-203ENST00000544278 FKBP8Q14318 412 aa22.19■■□□□ 1.14
SNRNP70-203ENST00000544278 C11orf95C9JLR9 678 aaPredicted RBP22.18■■□□□ 1.14
SNRNP70-203ENST00000544278 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms