RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 RRBP1Q9P2E9 1410 aaKnown RBP20.37■□□□□ 0.85
LSM14A-203ENST00000544216 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
LSM14A-203ENST00000544216 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
LSM14A-203ENST00000544216 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
LSM14A-203ENST00000544216 MIER1Q8N108 512 aa20.34■□□□□ 0.85
LSM14A-203ENST00000544216 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.84
LSM14A-203ENST00000544216 PDS5BQ9NTI5 1447 aa20.32■□□□□ 0.84
LSM14A-203ENST00000544216 PHLDB1Q86UU1 1377 aa20.29■□□□□ 0.84
LSM14A-203ENST00000544216 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
LSM14A-203ENST00000544216 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
LSM14A-203ENST00000544216 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
LSM14A-203ENST00000544216 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
LSM14A-203ENST00000544216 RAB3GAP2Q9H2M9 1393 aa20.25■□□□□ 0.83
LSM14A-203ENST00000544216 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
LSM14A-203ENST00000544216 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
LSM14A-203ENST00000544216 PCF11O94913 1555 aaKnown RBP20.21■□□□□ 0.83
LSM14A-203ENST00000544216 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
LSM14A-203ENST00000544216 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
LSM14A-203ENST00000544216 SETD5Q9C0A6 1442 aa20.16■□□□□ 0.82
LSM14A-203ENST00000544216 MAP3K1Q13233 1512 aa20.16■□□□□ 0.82
LSM14A-203ENST00000544216 SIN3AQ96ST3 1273 aa20.15■□□□□ 0.82
LSM14A-203ENST00000544216 CUL7Q14999 1698 aa20.14■□□□□ 0.81
LSM14A-203ENST00000544216 FMN1Q68DA7 1419 aa20.14■□□□□ 0.81
LSM14A-203ENST00000544216 CASKIN1Q8WXD9 1431 aa20.14■□□□□ 0.81
LSM14A-203ENST00000544216 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.812e-7■■■■□ 21.1
LSM14A-203ENST00000544216 FYCO1Q9BQS8 1478 aa20.11■□□□□ 0.81
LSM14A-203ENST00000544216 EFCAB5A4FU69 1503 aa20.1■□□□□ 0.81
LSM14A-203ENST00000544216 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
LSM14A-203ENST00000544216 CTTNBP2Q8WZ74 1663 aa20.04■□□□□ 0.8
LSM14A-203ENST00000544216 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
LSM14A-203ENST00000544216 CFAP43Q8NDM7 1665 aa20.01■□□□□ 0.79
LSM14A-203ENST00000544216 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
LSM14A-203ENST00000544216 WDR97A6NE52 1622 aa20■□□□□ 0.79
LSM14A-203ENST00000544216 FGD6Q6ZV73 1430 aa19.99■□□□□ 0.79
LSM14A-203ENST00000544216 FBLN2P98095 1184 aa19.98■□□□□ 0.79
LSM14A-203ENST00000544216 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
LSM14A-203ENST00000544216 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
LSM14A-203ENST00000544216 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
LSM14A-203ENST00000544216 RRP7BPQ9NSQ0 103 aa19.95■□□□□ 0.78
LSM14A-203ENST00000544216 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
LSM14A-203ENST00000544216 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
LSM14A-203ENST00000544216 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
LSM14A-203ENST00000544216 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
LSM14A-203ENST00000544216 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
LSM14A-203ENST00000544216 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
LSM14A-203ENST00000544216 GRIN2BQ13224 1484 aa19.89■□□□□ 0.77
LSM14A-203ENST00000544216 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
LSM14A-203ENST00000544216 PTPRKQ15262 1439 aa19.88■□□□□ 0.77
LSM14A-203ENST00000544216 MYOM3Q5VTT5 1437 aa19.88■□□□□ 0.77
LSM14A-203ENST00000544216 ERCC6Q03468 1493 aa19.87■□□□□ 0.77
LSM14A-203ENST00000544216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.86■□□□□ 0.77
LSM14A-203ENST00000544216 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
LSM14A-203ENST00000544216 TONSLQ96HA7 1378 aa19.84■□□□□ 0.77
LSM14A-203ENST00000544216 CCDC18Q5T9S5 1454 aa19.83■□□□□ 0.77
LSM14A-203ENST00000544216 PPP1R15AO75807 674 aaPredicted RBP19.83■□□□□ 0.76
LSM14A-203ENST00000544216 IQGAP2Q13576 1575 aa19.82■□□□□ 0.76
LSM14A-203ENST00000544216 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
LSM14A-203ENST00000544216 CDK13Q14004 1512 aaKnown RBP19.8■□□□□ 0.76
LSM14A-203ENST00000544216 IFT140Q96RY7 1462 aa19.8■□□□□ 0.76
LSM14A-203ENST00000544216 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
LSM14A-203ENST00000544216 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
LSM14A-203ENST00000544216 TIMELESSQ9UNS1 1208 aa19.78■□□□□ 0.76
LSM14A-203ENST00000544216 EHBP1L1Q8N3D4 1523 aa19.78■□□□□ 0.76
LSM14A-203ENST00000544216 HFM1A2PYH4 1435 aa19.77■□□□□ 0.76
LSM14A-203ENST00000544216 LRRIQ1Q96JM4 1722 aa19.77■□□□□ 0.76
LSM14A-203ENST00000544216 MAGI3Q5TCQ9 1506 aa19.77■□□□□ 0.76
LSM14A-203ENST00000544216 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
LSM14A-203ENST00000544216 EPRSP07814 1512 aaKnown RBP19.77■□□□□ 0.75
LSM14A-203ENST00000544216 NAIPQ13075 1403 aa19.76■□□□□ 0.75
LSM14A-203ENST00000544216 UACAQ9BZF9 1416 aa19.73■□□□□ 0.75
LSM14A-203ENST00000544216 CDK11AQ9UQ88 783 aaPredicted RBP19.73■□□□□ 0.75
LSM14A-203ENST00000544216 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
LSM14A-203ENST00000544216 FOXD1Q16676 465 aa19.72■□□□□ 0.75
LSM14A-203ENST00000544216 ZNF644Q9H582 1327 aaPredicted RBP19.72■□□□□ 0.75
LSM14A-203ENST00000544216 HECW1Q76N89 1606 aa19.71■□□□□ 0.75
LSM14A-203ENST00000544216 PTPN23Q9H3S7 1636 aa19.71■□□□□ 0.75
LSM14A-203ENST00000544216 UGGT2Q9NYU1 1516 aa19.71■□□□□ 0.75
LSM14A-203ENST00000544216 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
LSM14A-203ENST00000544216 KIAA0586Q9BVV6 1533 aa19.69■□□□□ 0.74
LSM14A-203ENST00000544216 WDR62O43379 1518 aa19.66■□□□□ 0.74
LSM14A-203ENST00000544216 PELP1Q8IZL8 1130 aaKnown RBP19.66■□□□□ 0.74
LSM14A-203ENST00000544216 GRIN2AQ12879 1464 aa19.66■□□□□ 0.74
LSM14A-203ENST00000544216 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
LSM14A-203ENST00000544216 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.74
LSM14A-203ENST00000544216 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
LSM14A-203ENST00000544216 DISP1Q96F81 1524 aa19.62■□□□□ 0.73
LSM14A-203ENST00000544216 ANP32CO43423 234 aa19.62■□□□□ 0.73
LSM14A-203ENST00000544216 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
LSM14A-203ENST00000544216 ARHGEF11O15085 1522 aa19.6■□□□□ 0.73
LSM14A-203ENST00000544216 PRG4Q92954 1404 aaPredicted RBP19.58■□□□□ 0.73
LSM14A-203ENST00000544216 MIA2Q96PC5 1412 aa19.58■□□□□ 0.73
LSM14A-203ENST00000544216 SLC4A1APQ9BWU0 796 aaKnown RBP19.58■□□□□ 0.72
LSM14A-203ENST00000544216 NUP153P49790 1475 aaKnown RBP19.58■□□□□ 0.72
LSM14A-203ENST00000544216 KIAA0556O60303 1618 aa19.57■□□□□ 0.72
LSM14A-203ENST00000544216 PLB1Q6P1J6 1458 aa19.56■□□□□ 0.72
LSM14A-203ENST00000544216 TCOF1Q13428 1488 aaKnown RBP19.56■□□□□ 0.72
LSM14A-203ENST00000544216 L3MBTL2Q969R5 705 aa19.54■□□□□ 0.72
LSM14A-203ENST00000544216 PLEKHD1A6NEE1 506 aa19.53■□□□□ 0.72
LSM14A-203ENST00000544216 CARMIL2Q6F5E8 1435 aa19.53■□□□□ 0.72
LSM14A-203ENST00000544216 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms